RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 DOA4P32571 926 aa-0.32□□□□□ -2.46
snR48snR48 ATG7P38862 630 aa-0.32□□□□□ -2.46
snR48snR48 YER135CP40082 130 aa-0.32□□□□□ -2.46
snR48snR48 MEH1Q02205 184 aa-0.32□□□□□ -2.46
snR48snR48 YDR541CQ03049 344 aa-0.32□□□□□ -2.46
snR48snR48 TAF11Q04226 346 aa-0.32□□□□□ -2.46
snR48snR48 PGA3Q12746 312 aaKnown RBP-0.32□□□□□ -2.46
snR48snR48 CDC13P32797 924 aaKnown RBP-0.33□□□□□ -2.46
snR48snR48 VAM7P32912 316 aa-0.33□□□□□ -2.46
snR48snR48 MRPS5P33759 307 aa-0.33□□□□□ -2.46
snR48snR48 YHL044WP38727 235 aa-0.33□□□□□ -2.46
snR48snR48 GLE2P40066 365 aa-0.33□□□□□ -2.46
snR48snR48 UTP25P40498 721 aaKnown RBP-0.33□□□□□ -2.46
snR48snR48 MRPL49P40858 161 aaPredicted RBP-0.33□□□□□ -2.46
snR48snR48 MND1P53102 219 aa-0.33□□□□□ -2.46
snR48snR48 MZM1Q03429 123 aaPredicted RBP-0.33□□□□□ -2.46
snR48snR48 SMP3Q04174 516 aa-0.33□□□□□ -2.46
snR48snR48 SPH1Q06160 661 aa-0.33□□□□□ -2.46
snR48snR48 AGC1Q12482 902 aa-0.33□□□□□ -2.46
snR48snR48 SPS100P13130 326 aa-0.34□□□□□ -2.46
snR48snR48 ATG15P25641 520 aa-0.34□□□□□ -2.46
snR48snR48 EFB1P32471 206 aaKnown RBP-0.34□□□□□ -2.46
snR48snR48 AIM29P36154 155 aa-0.34□□□□□ -2.46
snR48snR48 YIL012WP40551 113 aa-0.34□□□□□ -2.46
snR48snR48 SYS1P41544 203 aa-0.34□□□□□ -2.46
snR48snR48 CAB5Q03941 241 aa-0.34□□□□□ -2.46
snR48snR48 ERB1Q04660 807 aaKnown RBP-0.34□□□□□ -2.46
snR48snR48 NNT1Q05874 261 aa-0.34□□□□□ -2.46
snR48snR48 DCI1Q08558 271 aa-0.34□□□□□ -2.46
snR48snR48 SFI1Q12369 946 aa-0.34□□□□□ -2.46
snR48snR48 YAL063C-AQ3E791 96 aa-0.34□□□□□ -2.46
snR48snR48 MDH1P17505 334 aaKnown RBP RIP-Chip data-0.35□□□□□ -2.47not detected
snR48snR48 FPR1P20081 114 aaKnown RBP-0.35□□□□□ -2.47
snR48snR48 DBR1P24309 405 aaKnown RBP-0.35□□□□□ -2.47
snR48snR48 ADK2P26364 225 aa-0.35□□□□□ -2.47
snR48snR48 MBA1P38300 278 aa-0.35□□□□□ -2.47
snR48snR48 ZIM17P42844 174 aa-0.35□□□□□ -2.47
snR48snR48 FYV8P46949 817 aaKnown RBP-0.35□□□□□ -2.47
snR48snR48 CIS3P47001 227 aa-0.35□□□□□ -2.47
snR48snR48 YJL118WP47022 219 aa-0.35□□□□□ -2.47
snR48snR48 YGR111WP53265 400 aa-0.35□□□□□ -2.47
snR48snR48 YNR066CP53752 436 aa-0.35□□□□□ -2.47
snR48snR48 HCH1P53834 153 aa-0.35□□□□□ -2.47
snR48snR48 CIK1Q01649 594 aa-0.35□□□□□ -2.47
snR48snR48 CSM3Q04659 317 aa-0.35□□□□□ -2.47
snR48snR48 APC5Q08683 685 aa-0.35□□□□□ -2.47
snR48snR48 YPL245WQ12179 454 aaKnown RBP-0.35□□□□□ -2.47
snR48snR48 MSK1P32048 576 aa-0.36□□□□□ -2.47
snR48snR48 CAT2P32796 670 aaKnown RBP-0.36□□□□□ -2.47
snR48snR48 MRPL6P32904 214 aa-0.36□□□□□ -2.47
snR48snR48 YHL026CP38740 315 aa-0.36□□□□□ -2.47
snR48snR48 YDR089WP38966 869 aa-0.36□□□□□ -2.47
snR48snR48 PES4P39684 611 aa-0.36□□□□□ -2.47
snR48snR48 COG3P40094 801 aa-0.36□□□□□ -2.47
snR48snR48 SNL1P40548 159 aa-0.36□□□□□ -2.47
snR48snR48 TCB2P48231 1178 aa-0.36□□□□□ -2.47
snR48snR48 AIM36Q03798 255 aa-0.36□□□□□ -2.47
snR48snR48 AIM33Q04516 312 aa-0.36□□□□□ -2.47
snR48snR48 NDL1Q06568 189 aa-0.36□□□□□ -2.47
snR48snR48 IPK1Q06667 281 aa-0.36□□□□□ -2.47
snR48snR48 YOR292CQ08743 309 aa-0.36□□□□□ -2.47
snR48snR48 UAF30Q08747 228 aa-0.36□□□□□ -2.47
snR48snR48 ARF2P19146 181 aaKnown RBP-0.37□□□□□ -2.47
snR48snR48 HXT2P23585 541 aa-0.37□□□□□ -2.47
snR48snR48 SKI2P35207 1287 aaKnown RBP RIP-Chip data-0.37□□□□□ -2.47not detected
snR48snR48 SPL2P38839 148 aa-0.37□□□□□ -2.47
snR48snR48 YGL114WP53134 725 aa-0.37□□□□□ -2.47
snR48snR48 RET3P53600 189 aa-0.37□□□□□ -2.47
snR48snR48 YLR287CQ05881 355 aa-0.37□□□□□ -2.47
snR48snR48 MRX9Q07349 420 aaKnown RBP-0.37□□□□□ -2.47
snR48snR48 YOR268CQ08734 132 aa-0.37□□□□□ -2.47
snR48snR48 YPL278CQ08990 100 aa-0.37□□□□□ -2.47
snR48snR48 VIK1Q12045 647 aa-0.37□□□□□ -2.47
snR48snR48 FSH3Q99369 266 aa-0.37□□□□□ -2.47
snR48snR48 NUP157P40064 1391 aaKnown RBP-0.37□□□□□ -2.47
snR48snR48 PET8P38921 284 aa-0.38□□□□□ -2.47
snR48snR48 SHC1P39000 512 aa-0.38□□□□□ -2.47
snR48snR48 YJL016WP47072 561 aa-0.38□□□□□ -2.47
snR48snR48 YGR266WP53326 701 aa-0.38□□□□□ -2.47
snR48snR48 SVL3Q03088 825 aaKnown RBP-0.38□□□□□ -2.47
snR48snR48 SEC13Q04491 297 aaKnown RBP-0.38□□□□□ -2.47
snR48snR48 FCF1Q05498 189 aaPredicted RBP-0.38□□□□□ -2.47
snR48snR48 PEX27Q08580 376 aa-0.38□□□□□ -2.47
snR48snR48 PAN1P32521 1480 aa-0.38□□□□□ -2.47
snR48snR48 PUT1P09368 476 aa-0.39□□□□□ -2.47
snR48snR48 YGL010WP25338 174 aa-0.39□□□□□ -2.47
snR48snR48 SFC1P33303 322 aa-0.39□□□□□ -2.47
snR48snR48 IML3P38265 245 aa-0.39□□□□□ -2.47
snR48snR48 LSM5P40089 93 aaKnown RBP-0.39□□□□□ -2.47
snR48snR48 NDE1P40215 560 aa-0.39□□□□□ -2.47
snR48snR48 PRP24P49960 444 aaKnown RBP-0.39□□□□□ -2.47
snR48snR48 CAB4P53332 305 aa-0.39□□□□□ -2.47
snR48snR48 TVP15Q03860 143 aa-0.39□□□□□ -2.47
snR48snR48 DTD1Q07648 150 aaKnown RBP-0.39□□□□□ -2.47
snR48snR48 REP1P03871 373 aa-0.4□□□□□ -2.47
snR48snR48 RPS16AP0CX51 143 aaKnown RBP-0.4□□□□□ -2.47
snR48snR48 RPS16BP0CX52 143 aaKnown RBP-0.4□□□□□ -2.47
snR48snR48 CKI1P20485 582 aa-0.4□□□□□ -2.47
snR48snR48 RPL16BP26785 198 aaKnown RBP-0.4□□□□□ -2.47
snR48snR48 IMP1P28627 190 aa-0.4□□□□□ -2.47
Retrieved 100 of 5,963 RNA–protein pairs in 101.7 ms