RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	SEC31	P38968	1273 aa	Known RBP	5.02	□□□□□ -1.61
CSL4	YNL232W	SWD1	P39706	426 aa		5.02	□□□□□ -1.61
CSL4	YNL232W	RFC4	P40339	323 aa	Known RBP	5.02	□□□□□ -1.61
CSL4	YNL232W	MOB2	P43563	287 aa		5.02	□□□□□ -1.61
CSL4	YNL232W	GTO1	P48239	356 aa		5.02	□□□□□ -1.61
CSL4	YNL232W	MRK1	P50873	501 aa		5.02	□□□□□ -1.61
CSL4	YNL232W	CIK1	Q01649	594 aa		5.02	□□□□□ -1.61
CSL4	YNL232W	SKO1	Q02100	647 aa		5.02	□□□□□ -1.61
CSL4	YNL232W	RDL1	Q12305	139 aa	Known RBP	5.02	□□□□□ -1.61
CSL4	YNL232W	RTR2	Q12378	196 aa		5.02	□□□□□ -1.61
CSL4	YNL232W	NTG1	P31378	399 aa		5.01	□□□□□ -1.61
CSL4	YNL232W	CAF4	P36130	643 aa		5.01	□□□□□ -1.61
CSL4	YNL232W	LAS1	P36146	502 aa	Predicted RBP	5.01	□□□□□ -1.61
CSL4	YNL232W	PEX18	P38855	283 aa		5.01	□□□□□ -1.61
CSL4	YNL232W	NOP16	P40007	231 aa	Known RBP	5.01	□□□□□ -1.61
CSL4	YNL232W	YJL068C	P40363	299 aa		5.01	□□□□□ -1.61
CSL4	YNL232W	HIS6	P40545	261 aa		5.01	□□□□□ -1.61
CSL4	YNL232W	CAK1	P43568	368 aa	Predicted RBP	5.01	□□□□□ -1.61
CSL4	YNL232W	GLO1	P50107	326 aa		5.01	□□□□□ -1.61
CSL4	YNL232W	NOP19	P53317	196 aa	Predicted RBP	5.01	□□□□□ -1.61
CSL4	YNL232W	DSL1	P53847	754 aa		5.01	□□□□□ -1.61
CSL4	YNL232W	MRPL19	P53875	158 aa		5.01	□□□□□ -1.61
CSL4	YNL232W	HOT1	Q03213	719 aa		5.01	□□□□□ -1.61
CSL4	YNL232W	YKU80	Q04437	629 aa		5.01	□□□□□ -1.61
CSL4	YNL232W	NAT4	Q04751	285 aa		5.01	□□□□□ -1.61
CSL4	YNL232W	YLR036C	Q07986	203 aa		5.01	□□□□□ -1.61
CSL4	YNL232W	SLF1	Q12034	447 aa	Known RBP	5.01	□□□□□ -1.61
CSL4	YNL232W	RPS21B	Q3E754	87 aa	Known RBP	5.01	□□□□□ -1.61
CSL4	YNL232W	MTC4	P38335	694 aa	Known RBP	5	□□□□□ -1.61
CSL4	YNL232W	SLZ1	P40167	298 aa		5	□□□□□ -1.61
CSL4	YNL232W	ADO1	P47143	340 aa	Known RBP	5	□□□□□ -1.61
CSL4	YNL232W	PAC10	P48363	199 aa		5	□□□□□ -1.61
CSL4	YNL232W	RBG2	P53295	368 aa	Known RBP	5	□□□□□ -1.61
CSL4	YNL232W	DCP2	P53550	970 aa	Known RBP	5	□□□□□ -1.61
CSL4	YNL232W	RCF2	P53721	224 aa		5	□□□□□ -1.61
CSL4	YNL232W	DBP6	P53734	629 aa	Known RBP	5	□□□□□ -1.61
CSL4	YNL232W	ARG5,6	Q01217	863 aa		5	□□□□□ -1.61
CSL4	YNL232W	SED1	Q01589	338 aa		5	□□□□□ -1.61
CSL4	YNL232W	PIN3	Q06449	215 aa		5	□□□□□ -1.61
CSL4	YNL232W	SRL2	Q12020	392 aa		5	□□□□□ -1.61
CSL4	YNL232W	MCP1	Q12106	302 aa		5	□□□□□ -1.61
CSL4	YNL232W	YAL064W-B	O13512	126 aa		4.99	□□□□□ -1.61
CSL4	YNL232W	YCL049C	P25577	312 aa		4.99	□□□□□ -1.61
CSL4	YNL232W	PAC2	P39937	518 aa		4.99	□□□□□ -1.61
CSL4	YNL232W	SMX2	P40204	77 aa	Known RBP	4.99	□□□□□ -1.61
CSL4	YNL232W	EGT2	P42835	1041 aa		4.99	□□□□□ -1.61
CSL4	YNL232W	FAR3	P46671	204 aa		4.99	□□□□□ -1.61
CSL4	YNL232W	ABM1	P47146	123 aa		4.99	□□□□□ -1.61
CSL4	YNL232W	YGR126W	P53274	230 aa		4.99	□□□□□ -1.61
CSL4	YNL232W	CRZ1	P53968	678 aa		4.99	□□□□□ -1.61
CSL4	YNL232W	KAP120	Q02932	1032 aa		4.99	□□□□□ -1.61
CSL4	YNL232W	SNZ1	Q03148	297 aa		4.99	□□□□□ -1.61
CSL4	YNL232W	RSN1	Q03516	953 aa		4.99	□□□□□ -1.61
CSL4	YNL232W	RAD30	Q04049	632 aa		4.99	□□□□□ -1.61
CSL4	YNL232W	URC2	Q04411	772 aa		4.99	□□□□□ -1.61
CSL4	YNL232W	RAS2	P01120	322 aa	Known RBP	4.98	□□□□□ -1.61
CSL4	YNL232W	UNG1	P12887	359 aa		4.98	□□□□□ -1.61
CSL4	YNL232W	DBR1	P24309	405 aa	Known RBP	4.98	□□□□□ -1.61
CSL4	YNL232W	CLB2	P24869	491 aa		4.98	□□□□□ -1.61
CSL4	YNL232W	MRE11	P32829	692 aa		4.98	□□□□□ -1.61
CSL4	YNL232W	SOF1	P33750	489 aa	Known RBP	4.98	□□□□□ -1.61
CSL4	YNL232W	COS9	P36034	407 aa		4.98	□□□□□ -1.61
CSL4	YNL232W	SPP381	P38282	291 aa	Predicted RBP	4.98	□□□□□ -1.61
CSL4	YNL232W	AGX1	P43567	385 aa		4.98	□□□□□ -1.61
CSL4	YNL232W	SIP18	P50263	79 aa		4.98	□□□□□ -1.61
CSL4	YNL232W	MTQ1	P53944	314 aa		4.98	□□□□□ -1.61
CSL4	YNL232W	ERV25	P54837	211 aa	Known RBP	4.98	□□□□□ -1.61
CSL4	YNL232W	RPL6A	Q02326	176 aa	Known RBP	4.98	□□□□□ -1.61
CSL4	YNL232W	MRP51	Q02950	344 aa		4.98	□□□□□ -1.61
CSL4	YNL232W	RRN5	Q02983	363 aa		4.98	□□□□□ -1.61
CSL4	YNL232W	RCE1	Q03530	315 aa		4.98	□□□□□ -1.61
CSL4	YNL232W	VBA4	Q04602	768 aa	Known RBP	4.98	□□□□□ -1.61
CSL4	YNL232W	CRT10	Q08226	957 aa		4.98	□□□□□ -1.61
CSL4	YNL232W	YPR202W	Q08993	238 aa		4.98	□□□□□ -1.61
CSL4	YNL232W	JLP1	Q12358	412 aa		4.98	□□□□□ -1.61
CSL4	YNL232W	ATP2	P00830	511 aa	Known RBP	4.97	□□□□□ -1.61
CSL4	YNL232W	MSS18	P08593	268 aa		4.97	□□□□□ -1.61
CSL4	YNL232W	RPL35A	P0CX84	120 aa	Known RBP	4.97	□□□□□ -1.61
CSL4	YNL232W	RPL35B	P0CX85	120 aa	Known RBP	4.97	□□□□□ -1.61
CSL4	YNL232W	THR1	P17423	357 aa	Known RBP	4.97	□□□□□ -1.61
CSL4	YNL232W	SPO7	P18410	259 aa		4.97	□□□□□ -1.61
CSL4	YNL232W	PRP28	P23394	588 aa		4.97	□□□□□ -1.61
CSL4	YNL232W	SWH1	P35845	1188 aa		4.97	□□□□□ -1.61
CSL4	YNL232W	CHK1	P38147	527 aa		4.97	□□□□□ -1.61
CSL4	YNL232W	YLF2	P38746	405 aa		4.97	□□□□□ -1.61
CSL4	YNL232W	YHR180W	P38868	163 aa		4.97	□□□□□ -1.61
CSL4	YNL232W	YER084W	P40057	128 aa		4.97	□□□□□ -1.61
CSL4	YNL232W	PEF1	P53238	335 aa		4.97	□□□□□ -1.61
CSL4	YNL232W	PRM15	Q03262	622 aa		4.97	□□□□□ -1.61
CSL4	YNL232W	YDR476C	Q03362	224 aa		4.97	□□□□□ -1.61
CSL4	YNL232W	GGA1	Q06336	557 aa		4.97	□□□□□ -1.61
CSL4	YNL232W	OSW1	Q08692	278 aa		4.97	□□□□□ -1.61
CSL4	YNL232W	GPN2	Q08726	347 aa	Predicted RBP	4.97	□□□□□ -1.61
CSL4	YNL232W	MED2	Q12124	431 aa		4.97	□□□□□ -1.61
CSL4	YNL232W	USV1	Q12132	391 aa		4.97	□□□□□ -1.61
CSL4	YNL232W	RNH203	Q12338	110 aa		4.97	□□□□□ -1.61
CSL4	YNL232W	Q0142	Q9ZZW4	58 aa		4.97	□□□□□ -1.61
CSL4	YNL232W	CDC8	P00572	216 aa		4.96	□□□□□ -1.62
CSL4	YNL232W	ZWF1	P11412	505 aa	Known RBP	4.96	□□□□□ -1.62
CSL4	YNL232W	RVS161	P25343	265 aa	Known RBP	4.96	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms