RNA–Protein interactions for RNA: YNL206C

RTT106, Transcript of Histone chaperone, yeast

Gene RTT106, Length 1,368 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTT106	YNL206C	SCO1	P23833	295 aa		4.85	□□□□□ -1.63
RTT106	YNL206C	UBC8	P28263	218 aa		4.85	□□□□□ -1.63
RTT106	YNL206C	ECM15	P35195	104 aa		4.85	□□□□□ -1.63
RTT106	YNL206C	GPX1	P36014	167 aa		4.85	□□□□□ -1.63
RTT106	YNL206C	PEX18	P38855	283 aa		4.85	□□□□□ -1.63
RTT106	YNL206C	CTF8	P38877	133 aa		4.85	□□□□□ -1.63
RTT106	YNL206C	FET3	P38993	636 aa		4.85	□□□□□ -1.63
RTT106	YNL206C	YEL068C	P39977	110 aa		4.85	□□□□□ -1.63
RTT106	YNL206C	SLS1	P42900	643 aa		4.85	□□□□□ -1.63
RTT106	YNL206C	FAR7	P43592	221 aa		4.85	□□□□□ -1.63
RTT106	YNL206C	IRC7	P43623	340 aa		4.85	□□□□□ -1.63
RTT106	YNL206C	MSY1	P48527	492 aa		4.85	□□□□□ -1.63
RTT106	YNL206C	MRK1	P50873	501 aa		4.85	□□□□□ -1.63
RTT106	YNL206C	SNF12	P53628	566 aa		4.85	□□□□□ -1.63
RTT106	YNL206C	DML1	Q03652	475 aa		4.85	□□□□□ -1.63
RTT106	YNL206C	HFD1	Q04458	532 aa		4.85	□□□□□ -1.63
RTT106	YNL206C	UTP21	Q06078	939 aa	Predicted RBP	4.85	□□□□□ -1.63
RTT106	YNL206C	DTD1	Q07648	150 aa	Known RBP	4.85	□□□□□ -1.63
RTT106	YNL206C	COQ10	Q08058	207 aa		4.85	□□□□□ -1.63
RTT106	YNL206C	PEP4	P07267	405 aa	Known RBP	4.84	□□□□□ -1.63
RTT106	YNL206C	MET2	P08465	486 aa		4.84	□□□□□ -1.63
RTT106	YNL206C	YOL162W	P0CF19	215 aa		4.84	□□□□□ -1.63
RTT106	YNL206C	FBA1	P14540	359 aa	Known RBP	4.84	□□□□□ -1.63
RTT106	YNL206C	RPB8	P20436	146 aa		4.84	□□□□□ -1.63
RTT106	YNL206C	ATG15	P25641	520 aa		4.84	□□□□□ -1.63
RTT106	YNL206C	SRO77	P38163	1010 aa		4.84	□□□□□ -1.63
RTT106	YNL206C	YMR262W	P38430	313 aa		4.84	□□□□□ -1.63
RTT106	YNL206C	PTH1	P38876	190 aa	Known RBP	4.84	□□□□□ -1.63
RTT106	YNL206C	YAR028W	P39548	234 aa		4.84	□□□□□ -1.63
RTT106	YNL206C	KRE29	P40026	464 aa		4.84	□□□□□ -1.63
RTT106	YNL206C	THO1	P40040	218 aa	Known RBP	4.84	□□□□□ -1.63
RTT106	YNL206C	RFC4	P40339	323 aa	Known RBP	4.84	□□□□□ -1.63
RTT106	YNL206C	PRM8	P53174	237 aa		4.84	□□□□□ -1.63
RTT106	YNL206C	ERP6	P53198	216 aa		4.84	□□□□□ -1.63
RTT106	YNL206C	SEC13	Q04491	297 aa	Known RBP	4.84	□□□□□ -1.63
RTT106	YNL206C	SNO4	Q04902	237 aa		4.84	□□□□□ -1.63
RTT106	YNL206C	YPR127W	Q06494	345 aa		4.84	□□□□□ -1.63
RTT106	YNL206C	HSP33	Q08914	237 aa	Known RBP	4.84	□□□□□ -1.63
RTT106	YNL206C	HSP32	Q08992	237 aa		4.84	□□□□□ -1.63
RTT106	YNL206C	NFI1	Q12216	726 aa		4.84	□□□□□ -1.63
RTT106	YNL206C	YLR126C	Q12288	251 aa		4.84	□□□□□ -1.63
RTT106	YNL206C	APC2	Q12440	853 aa		4.84	□□□□□ -1.63
RTT106	YNL206C	FOL3	Q12676	427 aa	Predicted RBP	4.84	□□□□□ -1.63
RTT106	YNL206C	RPS13	P05756	151 aa	Known RBP	4.83	□□□□□ -1.64
RTT106	YNL206C	CDC36	P06100	191 aa	Predicted RBP	4.83	□□□□□ -1.64
RTT106	YNL206C	RPC40	P07703	335 aa	Known RBP	4.83	□□□□□ -1.64
RTT106	YNL206C	SNF4	P12904	322 aa		4.83	□□□□□ -1.64
RTT106	YNL206C	SNF6	P18888	332 aa		4.83	□□□□□ -1.64
RTT106	YNL206C	BUD5	P25300	642 aa	Predicted RBP	4.83	□□□□□ -1.64
RTT106	YNL206C	RRP7	P25368	297 aa	Predicted RBP	4.83	□□□□□ -1.64
RTT106	YNL206C	PRE2	P30656	287 aa	Known RBP	4.83	□□□□□ -1.64
RTT106	YNL206C	APE2	P32454	952 aa	Known RBP	4.83	□□□□□ -1.64
RTT106	YNL206C	TRS65	P32893	560 aa		4.83	□□□□□ -1.64
RTT106	YNL206C	COS9	P36034	407 aa		4.83	□□□□□ -1.64
RTT106	YNL206C	YKL071W	P36086	256 aa		4.83	□□□□□ -1.64
RTT106	YNL206C	MRPL39	P36533	70 aa		4.83	□□□□□ -1.64
RTT106	YNL206C	CHK1	P38147	527 aa		4.83	□□□□□ -1.64
RTT106	YNL206C	RPS20	P38701	121 aa	Known RBP	4.83	□□□□□ -1.64
RTT106	YNL206C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
RTT106	YNL206C	VHR1	P40522	640 aa		4.83	□□□□□ -1.64
RTT106	YNL206C	FMP33	P46998	180 aa		4.83	□□□□□ -1.64
RTT106	YNL206C	BRR6	P53062	197 aa		4.83	□□□□□ -1.64
RTT106	YNL206C	MON1	P53129	644 aa		4.83	□□□□□ -1.64
RTT106	YNL206C	COS1	P53822	381 aa		4.83	□□□□□ -1.64
RTT106	YNL206C	KAP120	Q02932	1032 aa		4.83	□□□□□ -1.64
RTT106	YNL206C	SCS7	Q03529	384 aa		4.83	□□□□□ -1.64
RTT106	YNL206C	HMO1	Q03973	246 aa	Known RBP	4.83	□□□□□ -1.64
RTT106	YNL206C	VBA4	Q04602	768 aa	Known RBP	4.83	□□□□□ -1.64
RTT106	YNL206C	YMR226C	Q05016	267 aa	Known RBP	4.83	□□□□□ -1.64
RTT106	YNL206C	COQ11	Q05892	277 aa		4.83	□□□□□ -1.64
RTT106	YNL206C	MED2	Q12124	431 aa		4.83	□□□□□ -1.64
RTT106	YNL206C	SPC3	Q12133	184 aa		4.83	□□□□□ -1.64
RTT106	YNL206C	YDL180W	Q12301	547 aa		4.83	□□□□□ -1.64
RTT106	YNL206C	YOR343C	Q12484	108 aa		4.83	□□□□□ -1.64
RTT106	YNL206C	YDL007C-A	Q2V2Q0	85 aa		4.83	□□□□□ -1.64
RTT106	YNL206C	MHF1	Q3E835	90 aa		4.83	□□□□□ -1.64
RTT106	YNL206C	HEM4	P06174	275 aa		4.82	□□□□□ -1.64
RTT106	YNL206C	RHO1	P06780	209 aa	Known RBP	4.82	□□□□□ -1.64
RTT106	YNL206C	YAK1	P14680	807 aa		4.82	□□□□□ -1.64
RTT106	YNL206C	SAM35	P14693	329 aa		4.82	□□□□□ -1.64
RTT106	YNL206C	CYS4	P32582	507 aa	Known RBP	4.82	□□□□□ -1.64
RTT106	YNL206C	SOF1	P33750	489 aa	Known RBP	4.82	□□□□□ -1.64
RTT106	YNL206C	SPO73	P40031	143 aa		4.82	□□□□□ -1.64
RTT106	YNL206C	NAS2	P40555	220 aa		4.82	□□□□□ -1.64
RTT106	YNL206C	AGP3	P43548	558 aa		4.82	□□□□□ -1.64
RTT106	YNL206C	IDS2	P46958	469 aa		4.82	□□□□□ -1.64
RTT106	YNL206C	MDE1	P47095	244 aa		4.82	□□□□□ -1.64
RTT106	YNL206C	ADO1	P47143	340 aa	Known RBP	4.82	□□□□□ -1.64
RTT106	YNL206C	SAM37	P50110	327 aa		4.82	□□□□□ -1.64
RTT106	YNL206C	YGL235W	P53071	178 aa		4.82	□□□□□ -1.64
RTT106	YNL206C	MPP6	P53725	186 aa	Predicted RBP	4.82	□□□□□ -1.64
RTT106	YNL206C	ASI2	P53895	289 aa		4.82	□□□□□ -1.64
RTT106	YNL206C	YDR239C	Q03780	787 aa		4.82	□□□□□ -1.64
RTT106	YNL206C	RSA3	Q05942	220 aa	Known RBP	4.82	□□□□□ -1.64
RTT106	YNL206C	SNT309	Q06091	175 aa	Predicted RBP	4.82	□□□□□ -1.64
RTT106	YNL206C	YPR147C	Q06522	304 aa	Known RBP	4.82	□□□□□ -1.64
RTT106	YNL206C	RAF1	Q06891	181 aa		4.82	□□□□□ -1.64
RTT106	YNL206C	HRT1	Q08273	121 aa		4.82	□□□□□ -1.64
RTT106	YNL206C	UIP4	Q08926	304 aa		4.82	□□□□□ -1.64
RTT106	YNL206C	YLR358C	O13565	187 aa		4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 89.1 ms