RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeastyeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CST9YLR394W HST1P53685 503 aa2.58□□□□□ -2
CST9YLR394W PRO2P54885 456 aaKnown RBP2.58□□□□□ -2
CST9YLR394W RPL21AQ02753 160 aaKnown RBP2.58□□□□□ -2
CST9YLR394W GAS2Q06135 555 aa2.58□□□□□ -2
CST9YLR394W RPL21BQ12672 160 aaKnown RBP2.58□□□□□ -2
CST9YLR394W SMF2P38778 549 aa2.57□□□□□ -2
CST9YLR394W CHL4P38907 458 aa2.57□□□□□ -2
CST9YLR394W PRP39P39682 629 aaKnown RBP2.57□□□□□ -2
CST9YLR394W MKC7P53379 596 aa2.57□□□□□ -2
CST9YLR394W SLT2Q00772 484 aa2.57□□□□□ -2
CST9YLR394W YMR010WQ03687 405 aa2.57□□□□□ -2
CST9YLR394W TAF10Q12030 206 aa2.57□□□□□ -2
CST9YLR394W TIR4Q12218 487 aaPredicted RBP2.57□□□□□ -2
CST9YLR394W YBL111CQ3E7Y5 667 aa2.57□□□□□ -2
CST9YLR394W SIR4P11978 1358 aa2.56□□□□□ -2
CST9YLR394W FAS2P19097 1887 aaKnown RBP2.56□□□□□ -2
CST9YLR394W TPI1P00942 248 aaKnown RBP2.56□□□□□ -2
CST9YLR394W MID2P36027 376 aa2.56□□□□□ -2
CST9YLR394W BMT2P38278 337 aa2.56□□□□□ -2
CST9YLR394W MMS21P38632 267 aa2.56□□□□□ -2
CST9YLR394W MOB2P43563 287 aa2.56□□□□□ -2
CST9YLR394W ATP22P50273 684 aaPredicted RBP2.56□□□□□ -2
CST9YLR394W MRX11Q03079 207 aa2.56□□□□□ -2
CST9YLR394W VHS1Q03785 461 aa2.56□□□□□ -2
CST9YLR394W RRB1Q04225 511 aaKnown RBP2.56□□□□□ -2
CST9YLR394W SRO7Q12038 1033 aa2.56□□□□□ -2
CST9YLR394W PMD1P32634 1753 aa2.55□□□□□ -2
CST9YLR394W YLL053CP0CD98 152 aa2.55□□□□□ -2
CST9YLR394W ICL1P28240 557 aaPredicted RBP2.55□□□□□ -2
CST9YLR394W ERG9P29704 444 aa2.55□□□□□ -2
CST9YLR394W MYO3P36006 1272 aa2.55□□□□□ -2
CST9YLR394W PEX22P39718 180 aa2.55□□□□□ -2
CST9YLR394W BTT1P40314 149 aaPredicted RBP2.55□□□□□ -2
CST9YLR394W STB1P42845 420 aa2.55□□□□□ -2
CST9YLR394W TPC1P53257 314 aa2.55□□□□□ -2
CST9YLR394W RNH201P53942 307 aa2.55□□□□□ -2
CST9YLR394W ALE1Q08548 619 aa2.55□□□□□ -2
CST9YLR394W RAX2Q12465 1220 aa2.55□□□□□ -2
CST9YLR394W PUT4P15380 627 aa2.54□□□□□ -2
CST9YLR394W OSM1P21375 501 aaKnown RBP2.54□□□□□ -2
CST9YLR394W COS9P36034 407 aa2.54□□□□□ -2
CST9YLR394W FHL1P39521 936 aa2.54□□□□□ -2
CST9YLR394W YGL114WP53134 725 aa2.54□□□□□ -2
CST9YLR394W CWC22P53333 577 aaKnown RBP2.54□□□□□ -2
CST9YLR394W YDR262WQ12331 272 aa2.54□□□□□ -2
CST9YLR394W YPR117WQ06116 2489 aa2.54□□□□□ -2
CST9YLR394W GAL3P13045 520 aa2.53□□□□□ -2
CST9YLR394W KRR1P25586 316 aaPredicted RBP2.53□□□□□ -2
CST9YLR394W MRPS9P38120 278 aa2.53□□□□□ -2
CST9YLR394W SHE3P38272 425 aaKnown RBP2.53□□□□□ -2
CST9YLR394W VEL1P53058 206 aa2.53□□□□□ -2
CST9YLR394W YNL146WP53906 100 aa2.53□□□□□ -2
CST9YLR394W APJ1P53940 528 aa2.53□□□□□ -2
CST9YLR394W KTR6P54070 446 aa2.53□□□□□ -2
CST9YLR394W ABZ2Q03266 374 aa2.53□□□□□ -2
CST9YLR394W SPH1Q06160 661 aa2.53□□□□□ -2
CST9YLR394W DDC1Q08949 612 aa2.53□□□□□ -2
CST9YLR394W YPQ1Q12010 308 aa2.53□□□□□ -2
CST9YLR394W FIG2P25653 1609 aa2.53□□□□□ -2
CST9YLR394W VMA2P16140 517 aaKnown RBP2.52□□□□□ -2.01
CST9YLR394W TRX1P22217 103 aaKnown RBP2.52□□□□□ -2.01
CST9YLR394W DCC1P25559 380 aa2.52□□□□□ -2.01
CST9YLR394W SRB2P34162 210 aa2.52□□□□□ -2.01
CST9YLR394W RRT13P40042 185 aa2.52□□□□□ -2.01
CST9YLR394W AIM20P40451 204 aa2.52□□□□□ -2.01
CST9YLR394W PXR1P53335 271 aaPredicted RBP2.52□□□□□ -2.01
CST9YLR394W RNY1Q02933 434 aaKnown RBP2.52□□□□□ -2.01
CST9YLR394W VPS20Q04272 221 aa2.52□□□□□ -2.01
CST9YLR394W FAR10Q06001 478 aa2.52□□□□□ -2.01
CST9YLR394W REX3Q12090 404 aa2.52□□□□□ -2.01
CST9YLR394W YDR018CQ12185 396 aa2.52□□□□□ -2.01
CST9YLR394W AUS1Q08409 1394 aa2.52□□□□□ -2.01
CST9YLR394W UTP10P42945 1769 aaKnown RBP2.52□□□□□ -2.01
CST9YLR394W REP1P03871 373 aa2.51□□□□□ -2.01
CST9YLR394W RNR2P09938 399 aaKnown RBP2.51□□□□□ -2.01
CST9YLR394W RPL18AP0CX49 186 aaKnown RBP2.51□□□□□ -2.01
CST9YLR394W RPL18BP0CX50 186 aaKnown RBP2.51□□□□□ -2.01
CST9YLR394W SUR1P33300 382 aa2.51□□□□□ -2.01
CST9YLR394W DTR1P38125 572 aa2.51□□□□□ -2.01
CST9YLR394W YFL040WP43562 540 aa2.51□□□□□ -2.01
CST9YLR394W MCH1Q07376 486 aa2.51□□□□□ -2.01
CST9YLR394W YAL067W-AQ8TGK6 75 aa2.51□□□□□ -2.01
CST9YLR394W SPS100P13130 326 aa2.51□□□□□ -2.01
CST9YLR394W EPT1P22140 391 aa2.51□□□□□ -2.01
CST9YLR394W DBP7P36120 742 aaKnown RBP2.51□□□□□ -2.01
CST9YLR394W SHC1P39000 512 aa2.51□□□□□ -2.01
CST9YLR394W YNL320WP42840 284 aa2.51□□□□□ -2.01
CST9YLR394W TAF6P53040 516 aa2.51□□□□□ -2.01
CST9YLR394W API2Q04413 109 aa2.51□□□□□ -2.01
CST9YLR394W RGS2Q99188 309 aa2.51□□□□□ -2.01
CST9YLR394W VPS63O13549 108 aa2.5□□□□□ -2.01
CST9YLR394W ASP3-2P0CX77 362 aa2.5□□□□□ -2.01
CST9YLR394W ASP3-3P0CX78 362 aa2.5□□□□□ -2.01
CST9YLR394W ASP3-4P0CX79 362 aa2.5□□□□□ -2.01
CST9YLR394W ASP3-1P0CZ17 362 aa2.5□□□□□ -2.01
CST9YLR394W BGL2P15703 313 aaKnown RBP2.5□□□□□ -2.01
CST9YLR394W URA10P30402 227 aa2.5□□□□□ -2.01
CST9YLR394W YPS1P32329 569 aa2.5□□□□□ -2.01
CST9YLR394W TIP20P33891 701 aa2.5□□□□□ -2.01
CST9YLR394W YKL162CP36052 402 aa2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms