RNA–Protein interactions for RNA: YLR062C

BUD28, Transcript of Dubious open reading frame, yeastyeast

Gene BUD28, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD28YLR062C PEP4P07267 405 aaKnown RBP4.47□□□□□ -1.69
BUD28YLR062C TFS1P14306 219 aa4.47□□□□□ -1.69
BUD28YLR062C RPB8P20436 146 aa4.47□□□□□ -1.69
BUD28YLR062C DBP2P24783 546 aaKnown RBP4.47□□□□□ -1.69
BUD28YLR062C CLB4P24871 460 aa4.47□□□□□ -1.69
BUD28YLR062C ASF2P32448 525 aaPredicted RBP4.47□□□□□ -1.69
BUD28YLR062C ARC19P33204 171 aaKnown RBP4.47□□□□□ -1.69
BUD28YLR062C SOF1P33750 489 aaKnown RBP4.47□□□□□ -1.69
BUD28YLR062C GPX1P36014 167 aa4.47□□□□□ -1.69
BUD28YLR062C JEN1P36035 616 aa4.47□□□□□ -1.69
BUD28YLR062C TAT1P38085 619 aa4.47□□□□□ -1.69
BUD28YLR062C CHK1P38147 527 aa4.47□□□□□ -1.69
BUD28YLR062C AIM3P38266 947 aaKnown RBP4.47□□□□□ -1.69
BUD28YLR062C YHL012WP38709 493 aa4.47□□□□□ -1.69
BUD28YLR062C RPP1P38786 293 aa4.47□□□□□ -1.69
BUD28YLR062C ZRG8P40021 1076 aa4.47□□□□□ -1.69
BUD28YLR062C YMR144WP40214 342 aaKnown RBP4.47□□□□□ -1.69
BUD28YLR062C GPP1P41277 250 aaKnown RBP4.47□□□□□ -1.69
BUD28YLR062C YNR062CP53748 327 aa4.47□□□□□ -1.69
BUD28YLR062C MRPL19P53875 158 aa4.47□□□□□ -1.69
BUD28YLR062C KAP120Q02932 1032 aa4.47□□□□□ -1.69
BUD28YLR062C YMR102CQ03177 834 aa4.47□□□□□ -1.69
BUD28YLR062C MRPL1Q04599 285 aa4.47□□□□□ -1.69
BUD28YLR062C SNT309Q06091 175 aaPredicted RBP4.47□□□□□ -1.69
BUD28YLR062C YPR147CQ06522 304 aaKnown RBP4.47□□□□□ -1.69
BUD28YLR062C MRL1Q06815 381 aa4.47□□□□□ -1.69
BUD28YLR062C YPL191CQ08930 360 aa4.47□□□□□ -1.69
BUD28YLR062C YDL180WQ12301 547 aa4.47□□□□□ -1.69
BUD28YLR062C DBP10Q12389 995 aaKnown RBP4.47□□□□□ -1.69
BUD28YLR062C APC2Q12440 853 aa4.47□□□□□ -1.69
BUD28YLR062C SET6Q12529 373 aa4.47□□□□□ -1.69
BUD28YLR062C YOL159C-AQ3E769 90 aa4.47□□□□□ -1.69
BUD28YLR062C YOL162WP0CF19 215 aa4.46□□□□□ -1.7
BUD28YLR062C ERS1P17261 260 aa4.46□□□□□ -1.7
BUD28YLR062C NUP1P20676 1076 aa4.46□□□□□ -1.7
BUD28YLR062C PUP2P32379 260 aa4.46□□□□□ -1.7
BUD28YLR062C CYS4P32582 507 aaKnown RBP4.46□□□□□ -1.7
BUD28YLR062C MSN4P33749 630 aa4.46□□□□□ -1.7
BUD28YLR062C YKL071WP36086 256 aa4.46□□□□□ -1.7
BUD28YLR062C GDI1P39958 451 aaKnown RBP4.46□□□□□ -1.7
BUD28YLR062C KRE29P40026 464 aa4.46□□□□□ -1.7
BUD28YLR062C DIM1P41819 318 aaKnown RBP4.46□□□□□ -1.7
BUD28YLR062C YFL051CP43552 160 aa4.46□□□□□ -1.7
BUD28YLR062C ADO1P47143 340 aaKnown RBP4.46□□□□□ -1.7
BUD28YLR062C RMR1P53060 241 aa4.46□□□□□ -1.7
BUD28YLR062C HFD1Q04458 532 aa4.46□□□□□ -1.7
BUD28YLR062C NIP7Q08962 181 aaKnown RBP4.46□□□□□ -1.7
BUD28YLR062C NCE102Q12207 173 aaRIP-Chip data4.46□□□□□ -1.7not detected
BUD28YLR062C NFI1Q12216 726 aa4.46□□□□□ -1.7
BUD28YLR062C RPL24AP04449 155 aaKnown RBP4.45□□□□□ -1.7
BUD28YLR062C RPC40P07703 335 aaKnown RBP4.45□□□□□ -1.7
BUD28YLR062C REC107P21651 314 aa4.45□□□□□ -1.7
BUD28YLR062C RRP7P25368 297 aaPredicted RBP4.45□□□□□ -1.7
BUD28YLR062C PRE2P30656 287 aaKnown RBP4.45□□□□□ -1.7
BUD28YLR062C THI4P32318 326 aa4.45□□□□□ -1.7
BUD28YLR062C MCM10P32354 571 aa4.45□□□□□ -1.7
BUD28YLR062C PPG1P32838 368 aa4.45□□□□□ -1.7
BUD28YLR062C SPC34P36131 295 aa4.45□□□□□ -1.7
BUD28YLR062C FET3P38993 636 aa4.45□□□□□ -1.7
BUD28YLR062C NAB3P38996 802 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
BUD28YLR062C AVT7P40501 490 aa4.45□□□□□ -1.7
BUD28YLR062C VHR1P40522 640 aa4.45□□□□□ -1.7
BUD28YLR062C IDP2P41939 412 aa4.45□□□□□ -1.7
BUD28YLR062C IRC7P43623 340 aa4.45□□□□□ -1.7
BUD28YLR062C PCP1P53259 346 aa4.45□□□□□ -1.7
BUD28YLR062C DAM1P53267 343 aa4.45□□□□□ -1.7
BUD28YLR062C YGR168CP53293 376 aa4.45□□□□□ -1.7
BUD28YLR062C HRT1Q08273 121 aa4.45□□□□□ -1.7
BUD28YLR062C MHF1Q3E835 90 aa4.45□□□□□ -1.7
BUD28YLR062C DPM1P14020 267 aaKnown RBP4.44□□□□□ -1.7
BUD28YLR062C APE2P32454 952 aaKnown RBP4.44□□□□□ -1.7
BUD28YLR062C NIC96P34077 839 aa4.44□□□□□ -1.7
BUD28YLR062C SIC1P38634 284 aa4.44□□□□□ -1.7
BUD28YLR062C ARN2P38724 620 aa4.44□□□□□ -1.7
BUD28YLR062C CTF8P38877 133 aa4.44□□□□□ -1.7
BUD28YLR062C SPO73P40031 143 aa4.44□□□□□ -1.7
BUD28YLR062C PRE6P40303 254 aaKnown RBP4.44□□□□□ -1.7
BUD28YLR062C POP1P41812 875 aa4.44□□□□□ -1.7
BUD28YLR062C AGP3P43548 558 aa4.44□□□□□ -1.7
BUD28YLR062C BRR6P53062 197 aa4.44□□□□□ -1.7
BUD28YLR062C PRM8P53174 237 aa4.44□□□□□ -1.7
BUD28YLR062C INN1P53901 409 aa4.44□□□□□ -1.7
BUD28YLR062C ASI1P54074 624 aa4.44□□□□□ -1.7
BUD28YLR062C DML1Q03652 475 aa4.44□□□□□ -1.7
BUD28YLR062C HMO1Q03973 246 aaKnown RBP4.44□□□□□ -1.7
BUD28YLR062C RSM24Q03976 319 aa4.44□□□□□ -1.7
BUD28YLR062C SNO4Q04902 237 aa4.44□□□□□ -1.7
BUD28YLR062C NDL1Q06568 189 aa4.44□□□□□ -1.7
BUD28YLR062C HSP33Q08914 237 aaKnown RBP4.44□□□□□ -1.7
BUD28YLR062C YPL225WQ08971 146 aaKnown RBP4.44□□□□□ -1.7
BUD28YLR062C HSP32Q08992 237 aa4.44□□□□□ -1.7
BUD28YLR062C SPC3Q12133 184 aa4.44□□□□□ -1.7
BUD28YLR062C YDR215CQ12240 137 aa4.44□□□□□ -1.7
BUD28YLR062C YHR214C-EQ8TGK0 99 aa4.44□□□□□ -1.7
BUD28YLR062C TY1A-LR4P0C2I8 440 aaKnown RBP4.43□□□□□ -1.7
BUD28YLR062C TY1A-DR6P0CX70 440 aa4.43□□□□□ -1.7
BUD28YLR062C TY1A-ER1P0CX71 440 aa4.43□□□□□ -1.7
BUD28YLR062C TY1A-LR2P0CX72 440 aa4.43□□□□□ -1.7
BUD28YLR062C TY1A-PLP0CX73 440 aa4.43□□□□□ -1.7
BUD28YLR062C TY1A-JR1P0CX74 440 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 123.3 ms