RNA–Protein interactions for RNA: YKL184W

SPE1, Transcript of Ornithine decarboxylase, yeastyeast

Gene SPE1, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPE1YKL184W ERD1P16151 362 aa1.81□□□□□ -2.12
SPE1YKL184W ZRT1P32804 376 aa1.81□□□□□ -2.12
SPE1YKL184W CYM1P32898 989 aa1.81□□□□□ -2.12
SPE1YKL184W KTI12P34253 313 aaKnown RBP1.81□□□□□ -2.12
SPE1YKL184W SHE1P38200 338 aa1.81□□□□□ -2.12
SPE1YKL184W PNC1P53184 216 aaKnown RBP1.81□□□□□ -2.12
SPE1YKL184W VOA1P53262 265 aa1.81□□□□□ -2.12
SPE1YKL184W DBP6P53734 629 aaKnown RBP1.81□□□□□ -2.12
SPE1YKL184W SUR7P54003 302 aa1.81□□□□□ -2.12
SPE1YKL184W IRC4Q03036 179 aa1.81□□□□□ -2.12
SPE1YKL184W INP2Q03824 705 aa1.81□□□□□ -2.12
SPE1YKL184W PBP4Q07362 185 aaKnown RBP1.81□□□□□ -2.12
SPE1YKL184W RPN6Q12377 434 aa1.81□□□□□ -2.12
SPE1YKL184W MRPL23Q12487 163 aaPredicted RBP1.81□□□□□ -2.12
SPE1YKL184W YOL085CQ99345 113 aa1.81□□□□□ -2.12
SPE1YKL184W PEP1P32319 1579 aa1.8□□□□□ -2.12
SPE1YKL184W TAF2P23255 1407 aa1.8□□□□□ -2.12
SPE1YKL184W RPC40P07703 335 aaKnown RBP1.8□□□□□ -2.12
SPE1YKL184W SAR1P20606 190 aaKnown RBP1.8□□□□□ -2.12
SPE1YKL184W DCC1P25559 380 aa1.8□□□□□ -2.12
SPE1YKL184W ACB1P31787 87 aa1.8□□□□□ -2.12
SPE1YKL184W SKG6P32900 734 aaPredicted RBP1.8□□□□□ -2.12
SPE1YKL184W YKL162CP36052 402 aa1.8□□□□□ -2.12
SPE1YKL184W MRPL40P36534 297 aa1.8□□□□□ -2.12
SPE1YKL184W YMR262WP38430 313 aa1.8□□□□□ -2.12
SPE1YKL184W GGC1P38988 300 aa1.8□□□□□ -2.12
SPE1YKL184W YGR266WP53326 701 aa1.8□□□□□ -2.12
SPE1YKL184W ARP5P53946 755 aa1.8□□□□□ -2.12
SPE1YKL184W MMT2Q08970 484 aa1.8□□□□□ -2.12
SPE1YKL184W TAF10Q12030 206 aa1.8□□□□□ -2.12
SPE1YKL184W PAA1Q12447 191 aaKnown RBP1.8□□□□□ -2.12
SPE1YKL184W THO2P53552 1597 aaKnown RBP1.8□□□□□ -2.12
SPE1YKL184W MDS3P53094 1487 aa1.79□□□□□ -2.12
SPE1YKL184W FLO11P08640 1367 aa1.79□□□□□ -2.12
SPE1YKL184W YPR096CO13587 100 aa1.79□□□□□ -2.12
SPE1YKL184W REP1P03871 373 aa1.79□□□□□ -2.12
SPE1YKL184W CSM1P25651 190 aa1.79□□□□□ -2.12
SPE1YKL184W DAL80P26343 269 aa1.79□□□□□ -2.12
SPE1YKL184W UFE1P41834 346 aa1.79□□□□□ -2.12
SPE1YKL184W CPR7P47103 393 aa1.79□□□□□ -2.12
SPE1YKL184W API2Q04413 109 aa1.79□□□□□ -2.12
SPE1YKL184W RRG8Q06109 277 aa1.79□□□□□ -2.12
SPE1YKL184W YLR413WQ06689 675 aa1.79□□□□□ -2.12
SPE1YKL184W VAC14Q06708 880 aa1.79□□□□□ -2.12
SPE1YKL184W ALE1Q08548 619 aa1.79□□□□□ -2.12
SPE1YKL184W DCP1Q12517 231 aaPredicted RBP1.79□□□□□ -2.12
SPE1YKL184W YAL067W-AQ8TGK6 75 aa1.79□□□□□ -2.12
SPE1YKL184W ATG2P53855 1592 aa1.79□□□□□ -2.12
SPE1YKL184W REV3P14284 1504 aa1.79□□□□□ -2.12
SPE1YKL184W BUD4P47136 1447 aa1.79□□□□□ -2.12
SPE1YKL184W INO2P26798 304 aa1.78□□□□□ -2.12
SPE1YKL184W ICL1P28240 557 aaPredicted RBP1.78□□□□□ -2.12
SPE1YKL184W DBP7P36120 742 aaKnown RBP1.78□□□□□ -2.12
SPE1YKL184W YIL059CP40520 121 aa1.78□□□□□ -2.12
SPE1YKL184W GPI8P49018 411 aa1.78□□□□□ -2.12
SPE1YKL184W ZRG17P53735 605 aa1.78□□□□□ -2.12
SPE1YKL184W SED5Q01590 340 aa1.78□□□□□ -2.12
SPE1YKL184W VTI1Q04338 217 aa1.78□□□□□ -2.12
SPE1YKL184W YOL029CQ08187 201 aa1.78□□□□□ -2.12
SPE1YKL184W ERP3Q12403 225 aa1.78□□□□□ -2.12
SPE1YKL184W SAL1D6W196 494 aa1.77□□□□□ -2.13
SPE1YKL184W UGA1P17649 471 aa1.77□□□□□ -2.13
SPE1YKL184W MRPL20P22354 195 aaPredicted RBP1.77□□□□□ -2.13
SPE1YKL184W GPI12P23797 304 aa1.77□□□□□ -2.13
SPE1YKL184W SWD2P36104 329 aaPredicted RBP1.77□□□□□ -2.13
SPE1YKL184W FRM2P37261 193 aa1.77□□□□□ -2.13
SPE1YKL184W TAE1P38340 232 aa1.77□□□□□ -2.13
SPE1YKL184W EFM1P38732 585 aa1.77□□□□□ -2.13
SPE1YKL184W RRF1P38771 230 aa1.77□□□□□ -2.13
SPE1YKL184W MEP1P40260 492 aa1.77□□□□□ -2.13
SPE1YKL184W INA22P40576 216 aa1.77□□□□□ -2.13
SPE1YKL184W OKP1P53298 406 aa1.77□□□□□ -2.13
SPE1YKL184W YNL050CP53952 270 aa1.77□□□□□ -2.13
SPE1YKL184W SCS7Q03529 384 aa1.77□□□□□ -2.13
SPE1YKL184W FAR10Q06001 478 aa1.77□□□□□ -2.13
SPE1YKL184W RDL2Q08742 149 aaKnown RBP1.77□□□□□ -2.13
SPE1YKL184W TFC7Q12415 435 aa1.77□□□□□ -2.13
SPE1YKL184W YIL002W-AQ3E7Z5 69 aa1.77□□□□□ -2.13
SPE1YKL184W DBP3P20447 523 aaKnown RBP1.76□□□□□ -2.13
SPE1YKL184W RPL5P26321 297 aaKnown RBP1.76□□□□□ -2.13
SPE1YKL184W RPL16BP26785 198 aaKnown RBP1.76□□□□□ -2.13
SPE1YKL184W RPS0AP32905 252 aaKnown RBP1.76□□□□□ -2.13
SPE1YKL184W RPC25P35718 212 aa1.76□□□□□ -2.13
SPE1YKL184W GCD14P46959 383 aaPredicted RBP1.76□□□□□ -2.13
SPE1YKL184W LOH1P47055 219 aa1.76□□□□□ -2.13
SPE1YKL184W YGL185CP53100 379 aa1.76□□□□□ -2.13
SPE1YKL184W RPN14P53196 417 aa1.76□□□□□ -2.13
SPE1YKL184W TPC1P53257 314 aa1.76□□□□□ -2.13
SPE1YKL184W INP1Q03694 420 aa1.76□□□□□ -2.13
SPE1YKL184W SNX41Q04053 625 aa1.76□□□□□ -2.13
SPE1YKL184W APC4Q04601 652 aa1.76□□□□□ -2.13
SPE1YKL184W MRX9Q07349 420 aaKnown RBP1.76□□□□□ -2.13
SPE1YKL184W UTP23Q12339 254 aaKnown RBP1.76□□□□□ -2.13
SPE1YKL184W SKI3P17883 1432 aaKnown RBP1.76□□□□□ -2.13
SPE1YKL184W SIN3P22579 1536 aa1.76□□□□□ -2.13
SPE1YKL184W AGA2P32781 87 aa1.75□□□□□ -2.13
SPE1YKL184W PPQ1P32945 549 aa1.75□□□□□ -2.13
SPE1YKL184W CBF5P33322 483 aaKnown RBP RIP-Chip data1.75□□□□□ -2.13not detected
SPE1YKL184W YHR035WP38769 630 aa1.75□□□□□ -2.13
SPE1YKL184W CTM1P38818 585 aa1.75□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms