RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W SDT1P53078 280 aa4.33□□□□□ -1.72
SPC42YKL042W RNH201P53942 307 aa4.33□□□□□ -1.72
SPC42YKL042W SCS7Q03529 384 aa4.33□□□□□ -1.72
SPC42YKL042W ATC1Q04005 294 aa4.33□□□□□ -1.72
SPC42YKL042W FAR10Q06001 478 aa4.33□□□□□ -1.72
SPC42YKL042W RPN8Q08723 338 aaKnown RBP4.33□□□□□ -1.72
SPC42YKL042W YOR376WQ08900 122 aa4.33□□□□□ -1.72
SPC42YKL042W RPL21BQ12672 160 aaKnown RBP4.33□□□□□ -1.72
SPC42YKL042W RPL31AP0C2H8 113 aaKnown RBP4.32□□□□□ -1.72
SPC42YKL042W YSR3P23501 404 aa4.32□□□□□ -1.72
SPC42YKL042W IES6P32617 166 aa4.32□□□□□ -1.72
SPC42YKL042W SHE1P38200 338 aa4.32□□□□□ -1.72
SPC42YKL042W SOP4P39543 234 aaPredicted RBP4.32□□□□□ -1.72
SPC42YKL042W SCC4P40090 624 aa4.32□□□□□ -1.72
SPC42YKL042W NRM1P53718 249 aa4.32□□□□□ -1.72
SPC42YKL042W YPL077CQ02831 240 aa4.32□□□□□ -1.72
SPC42YKL042W YDR115WQ04598 105 aa4.32□□□□□ -1.72
SPC42YKL042W GPN3Q06543 272 aa4.32□□□□□ -1.72
SPC42YKL042W ASR1Q06834 288 aa4.32□□□□□ -1.72
SPC42YKL042W SSK22P25390 1331 aaPredicted RBP4.31□□□□□ -1.72
SPC42YKL042W TDH1P00360 332 aaKnown RBP4.31□□□□□ -1.72
SPC42YKL042W HPR1P17629 752 aaKnown RBP4.31□□□□□ -1.72
SPC42YKL042W INO2P26798 304 aa4.31□□□□□ -1.72
SPC42YKL042W COT1P32798 439 aa4.31□□□□□ -1.72
SPC42YKL042W MCH2P36032 473 aa4.31□□□□□ -1.72
SPC42YKL042W STB1P42845 420 aa4.31□□□□□ -1.72
SPC42YKL042W SCW10Q04951 389 aa4.31□□□□□ -1.72
SPC42YKL042W GCG1P32656 232 aaKnown RBP4.3□□□□□ -1.72
SPC42YKL042W SKG6P32900 734 aaPredicted RBP4.3□□□□□ -1.72
SPC42YKL042W CBF5P33322 483 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
SPC42YKL042W YKL063CP35725 167 aa4.3□□□□□ -1.72
SPC42YKL042W RPC37P36121 282 aa4.3□□□□□ -1.72
SPC42YKL042W YIA6P40556 373 aa4.3□□□□□ -1.72
SPC42YKL042W GDS1P41913 522 aa4.3□□□□□ -1.72
SPC42YKL042W VHT1P53241 593 aa4.3□□□□□ -1.72
SPC42YKL042W TPC1P53257 314 aa4.3□□□□□ -1.72
SPC42YKL042W POM33Q12164 279 aa4.3□□□□□ -1.72
SPC42YKL042W RRP42Q12277 265 aaPredicted RBP4.3□□□□□ -1.72
SPC42YKL042W ILV1P00927 576 aaKnown RBP4.29□□□□□ -1.72
SPC42YKL042W BGL2P15703 313 aaKnown RBP4.29□□□□□ -1.72
SPC42YKL042W GPI18P38211 433 aa4.29□□□□□ -1.72
SPC42YKL042W YPC1P38298 316 aa4.29□□□□□ -1.72
SPC42YKL042W RCK1P38622 512 aa4.29□□□□□ -1.72
SPC42YKL042W SHQ1P40486 507 aaPredicted RBP4.29□□□□□ -1.72
SPC42YKL042W UBC13P52490 153 aa4.29□□□□□ -1.72
SPC42YKL042W MRX11Q03079 207 aa4.29□□□□□ -1.72
SPC42YKL042W MMT2Q08970 484 aa4.29□□□□□ -1.72
SPC42YKL042W SRO7Q12038 1033 aa4.29□□□□□ -1.72
SPC42YKL042W COX4P04037 155 aa4.28□□□□□ -1.72
SPC42YKL042W RSR1P13856 272 aa4.28□□□□□ -1.72
SPC42YKL042W MRPL20P22354 195 aaPredicted RBP4.28□□□□□ -1.72
SPC42YKL042W RPT5P33297 434 aaKnown RBP4.28□□□□□ -1.72
SPC42YKL042W SHE3P38272 425 aaKnown RBP4.28□□□□□ -1.72
SPC42YKL042W PET8P38921 284 aa4.28□□□□□ -1.72
SPC42YKL042W RMI1Q02685 241 aa4.28□□□□□ -1.72
SPC42YKL042W GMC2Q06201 188 aa4.28□□□□□ -1.72
SPC42YKL042W MHR1Q06630 226 aa4.28□□□□□ -1.72
SPC42YKL042W TMC1Q08422 150 aaPredicted RBP4.28□□□□□ -1.72
SPC42YKL042W YOL107WQ12239 342 aa4.28□□□□□ -1.72
SPC42YKL042W TFC7Q12415 435 aa4.28□□□□□ -1.72
SPC42YKL042W YPR064WQ12492 139 aa4.28□□□□□ -1.72
SPC42YKL042W TDH3P00359 332 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
SPC42YKL042W ASP3-2P0CX77 362 aa4.27□□□□□ -1.73
SPC42YKL042W ASP3-3P0CX78 362 aa4.27□□□□□ -1.73
SPC42YKL042W ASP3-4P0CX79 362 aa4.27□□□□□ -1.73
SPC42YKL042W ASP3-1P0CZ17 362 aa4.27□□□□□ -1.73
SPC42YKL042W PRE5P40302 234 aaKnown RBP4.27□□□□□ -1.73
SPC42YKL042W HIT1P46973 164 aa4.27□□□□□ -1.73
SPC42YKL042W KAP114P53067 1004 aa4.27□□□□□ -1.73
SPC42YKL042W YGL039WP53183 348 aaKnown RBP4.27□□□□□ -1.73
SPC42YKL042W COX20Q04935 205 aa4.27□□□□□ -1.73
SPC42YKL042W FOL3Q12676 427 aaPredicted RBP4.27□□□□□ -1.73
SPC42YKL042W COY1P34237 679 aa4.26□□□□□ -1.73
SPC42YKL042W EFM1P38732 585 aa4.26□□□□□ -1.73
SPC42YKL042W SPT8P38915 602 aa4.26□□□□□ -1.73
SPC42YKL042W ALD5P40047 520 aaKnown RBP4.26□□□□□ -1.73
SPC42YKL042W YLR446WQ06204 433 aa4.26□□□□□ -1.73
SPC42YKL042W YPL245WQ12179 454 aaKnown RBP4.26□□□□□ -1.73
SPC42YKL042W BI3Q9ZZW7 517 aa4.26□□□□□ -1.73
SPC42YKL042W YJL118WP47022 219 aa4.25□□□□□ -1.73
SPC42YKL042W NUP84P52891 726 aa4.25□□□□□ -1.73
SPC42YKL042W LSB1P53281 241 aa4.25□□□□□ -1.73
SPC42YKL042W KTR6P54070 446 aa4.25□□□□□ -1.73
SPC42YKL042W ADD37Q03233 198 aa4.25□□□□□ -1.73
SPC42YKL042W GMC1Q04399 608 aa4.25□□□□□ -1.73
SPC42YKL042W YLR173WQ06247 608 aa4.25□□□□□ -1.73
SPC42YKL042W MIM1Q08176 113 aa4.25□□□□□ -1.73
SPC42YKL042W LAG2Q92325 660 aa4.25□□□□□ -1.73
SPC42YKL042W TFS1P14306 219 aa4.24□□□□□ -1.73
SPC42YKL042W VPS1P21576 704 aaKnown RBP4.24□□□□□ -1.73
SPC42YKL042W IFM1P25038 676 aa4.24□□□□□ -1.73
SPC42YKL042W IMP3P32899 183 aaPredicted RBP4.24□□□□□ -1.73
SPC42YKL042W TAE1P38340 232 aa4.24□□□□□ -1.73
SPC42YKL042W YPS5P53057 165 aa4.24□□□□□ -1.73
SPC42YKL042W SDS23P53172 527 aa4.24□□□□□ -1.73
SPC42YKL042W CPD1P53314 239 aa4.24□□□□□ -1.73
SPC42YKL042W MRPS16Q02608 121 aa4.24□□□□□ -1.73
SPC42YKL042W RPL21AQ02753 160 aaKnown RBP4.24□□□□□ -1.73
SPC42YKL042W TAZ1Q06510 381 aa4.24□□□□□ -1.73
SPC42YKL042W BTS1Q12051 335 aa4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 28.7 ms