RNA–Protein interactions for RNA: YJL173C

RFA3, Transcript of Subunit of heterotrimeric Replication Protein A (RPA), yeastyeast

Gene RFA3, Length 369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFA3YJL173C RCK1P38622 512 aa2.58□□□□□ -2
RFA3YJL173C DSE1P40077 573 aa2.58□□□□□ -2
RFA3YJL173C YGR016WP53209 190 aa2.58□□□□□ -2
RFA3YJL173C RDL2Q08742 149 aaKnown RBP2.58□□□□□ -2
RFA3YJL173C RNR2P09938 399 aaKnown RBP2.57□□□□□ -2
RFA3YJL173C SLM1P40485 686 aa2.57□□□□□ -2
RFA3YJL173C YPL245WQ12179 454 aaKnown RBP2.57□□□□□ -2
RFA3YJL173C PRP46Q12417 451 aaPredicted RBP2.57□□□□□ -2
RFA3YJL173C MRPL20P22354 195 aaPredicted RBP2.56□□□□□ -2
RFA3YJL173C YJL144WP47009 104 aa2.56□□□□□ -2
RFA3YJL173C YGR168CP53293 376 aa2.56□□□□□ -2
RFA3YJL173C MIM1Q08176 113 aa2.56□□□□□ -2
RFA3YJL173C TFC7Q12415 435 aa2.56□□□□□ -2
RFA3YJL173C RPS23AP0CX29 145 aaKnown RBP2.55□□□□□ -2
RFA3YJL173C RPS23BP0CX30 145 aa2.55□□□□□ -2
RFA3YJL173C ERD1P16151 362 aa2.55□□□□□ -2
RFA3YJL173C INO2P26798 304 aa2.55□□□□□ -2
RFA3YJL173C UIP5P36137 443 aa2.55□□□□□ -2
RFA3YJL173C CSI1Q04368 295 aa2.55□□□□□ -2
RFA3YJL173C TRM10Q12400 293 aa2.55□□□□□ -2
RFA3YJL173C HPR1P17629 752 aaKnown RBP2.54□□□□□ -2
RFA3YJL173C BUD2P33314 1104 aa2.54□□□□□ -2
RFA3YJL173C LIN1P38852 340 aaPredicted RBP2.54□□□□□ -2
RFA3YJL173C ASP1P38986 381 aaPredicted RBP2.54□□□□□ -2
RFA3YJL173C YLR012CQ07927 99 aa2.54□□□□□ -2
RFA3YJL173C YPR063CQ12160 140 aa2.54□□□□□ -2
RFA3YJL173C CBP2P03874 630 aaPredicted RBP2.53□□□□□ -2
RFA3YJL173C DAL5P15365 543 aa2.53□□□□□ -2
RFA3YJL173C ECM14P38836 430 aa2.53□□□□□ -2
RFA3YJL173C IRC4Q03036 179 aa2.53□□□□□ -2
RFA3YJL173C HRT1Q08273 121 aa2.53□□□□□ -2
RFA3YJL173C VIK1Q12045 647 aa2.53□□□□□ -2
RFA3YJL173C GAL3P13045 520 aa2.52□□□□□ -2.01
RFA3YJL173C CSE1P33307 960 aa2.52□□□□□ -2.01
RFA3YJL173C PET8P38921 284 aa2.52□□□□□ -2.01
RFA3YJL173C NAS2P40555 220 aa2.52□□□□□ -2.01
RFA3YJL173C BUD13P46947 266 aaPredicted RBP2.52□□□□□ -2.01
RFA3YJL173C FYV8P46949 817 aaKnown RBP2.52□□□□□ -2.01
RFA3YJL173C YNR066CP53752 436 aa2.52□□□□□ -2.01
RFA3YJL173C UBX2Q04228 584 aa2.52□□□□□ -2.01
RFA3YJL173C YPL264CQ08980 353 aa2.52□□□□□ -2.01
RFA3YJL173C ERP3Q12403 225 aa2.52□□□□□ -2.01
RFA3YJL173C RPL18AP0CX49 186 aaKnown RBP2.51□□□□□ -2.01
RFA3YJL173C RPL18BP0CX50 186 aaKnown RBP2.51□□□□□ -2.01
RFA3YJL173C SUR1P33300 382 aa2.51□□□□□ -2.01
RFA3YJL173C YDR222WQ04925 415 aa2.51□□□□□ -2.01
RFA3YJL173C ZRT1P32804 376 aa2.5□□□□□ -2.01
RFA3YJL173C TKL2P33315 681 aa2.5□□□□□ -2.01
RFA3YJL173C SOP4P39543 234 aaPredicted RBP2.5□□□□□ -2.01
RFA3YJL173C EDC2P40023 145 aaPredicted RBP2.5□□□□□ -2.01
RFA3YJL173C UTP25P40498 721 aaKnown RBP2.5□□□□□ -2.01
RFA3YJL173C SHE4P51534 789 aa2.5□□□□□ -2.01
RFA3YJL173C YPL080CQ02826 108 aa2.5□□□□□ -2.01
RFA3YJL173C GTO3Q04806 366 aa2.5□□□□□ -2.01
RFA3YJL173C SGT2Q12118 346 aaKnown RBP2.5□□□□□ -2.01
RFA3YJL173C IES3Q12345 250 aa2.5□□□□□ -2.01
RFA3YJL173C ARO4P32449 370 aaKnown RBP2.49□□□□□ -2.01
RFA3YJL173C ALK2P32789 676 aaPredicted RBP2.49□□□□□ -2.01
RFA3YJL173C PPQ1P32945 549 aa2.49□□□□□ -2.01
RFA3YJL173C MED8P38304 223 aa2.49□□□□□ -2.01
RFA3YJL173C YHR035WP38769 630 aa2.49□□□□□ -2.01
RFA3YJL173C CAJ1P39101 391 aa2.49□□□□□ -2.01
RFA3YJL173C ECO1P43605 281 aa2.49□□□□□ -2.01
RFA3YJL173C SNX41Q04053 625 aa2.49□□□□□ -2.01
RFA3YJL173C SEC13Q04491 297 aaKnown RBP2.49□□□□□ -2.01
RFA3YJL173C YDR114CQ04597 100 aa2.49□□□□□ -2.01
RFA3YJL173C YDR286CQ05530 114 aa2.49□□□□□ -2.01
RFA3YJL173C YOR292CQ08743 309 aa2.49□□□□□ -2.01
RFA3YJL173C UTP23Q12339 254 aaKnown RBP2.49□□□□□ -2.01
RFA3YJL173C LAG2Q92325 660 aa2.49□□□□□ -2.01
RFA3YJL173C VMA2P16140 517 aaKnown RBP2.48□□□□□ -2.01
RFA3YJL173C DAL81P21657 970 aa2.48□□□□□ -2.01
RFA3YJL173C OPI1P21957 404 aa2.48□□□□□ -2.01
RFA3YJL173C YPS1P32329 569 aa2.48□□□□□ -2.01
RFA3YJL173C MRPL6P32904 214 aa2.48□□□□□ -2.01
RFA3YJL173C PES4P39684 611 aa2.48□□□□□ -2.01
RFA3YJL173C INA22P40576 216 aa2.48□□□□□ -2.01
RFA3YJL173C YFR045WP43617 309 aa2.48□□□□□ -2.01
RFA3YJL173C YGL088WP53151 121 aa2.48□□□□□ -2.01
RFA3YJL173C YNL040WP53960 456 aaPredicted RBP2.48□□□□□ -2.01
RFA3YJL173C ARC18Q05933 178 aaKnown RBP2.48□□□□□ -2.01
RFA3YJL173C DXO1Q06349 442 aa2.48□□□□□ -2.01
RFA3YJL173C RLP24Q07915 199 aaKnown RBP2.48□□□□□ -2.01
RFA3YJL173C SAM4Q08985 325 aaKnown RBP2.48□□□□□ -2.01
RFA3YJL173C TDH3P00359 332 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
RFA3YJL173C CDC37P06101 506 aaKnown RBP2.47□□□□□ -2.01
RFA3YJL173C AIM29P36154 155 aa2.47□□□□□ -2.01
RFA3YJL173C SMC2P38989 1170 aaKnown RBP2.47□□□□□ -2.01
RFA3YJL173C AIM20P40451 204 aa2.47□□□□□ -2.01
RFA3YJL173C HSH155P49955 971 aaKnown RBP2.47□□□□□ -2.01
RFA3YJL173C ACT1P60010 375 aaKnown RBP2.47□□□□□ -2.01
RFA3YJL173C YPL113CQ02961 396 aa2.47□□□□□ -2.01
RFA3YJL173C PGC1Q08959 321 aa2.47□□□□□ -2.01
RFA3YJL173C TRX1P22217 103 aaKnown RBP2.46□□□□□ -2.02
RFA3YJL173C VPH2P32341 215 aa2.46□□□□□ -2.02
RFA3YJL173C UTR5P32630 166 aa2.46□□□□□ -2.02
RFA3YJL173C YKL162CP36052 402 aa2.46□□□□□ -2.02
RFA3YJL173C SDH4P37298 181 aa2.46□□□□□ -2.02
RFA3YJL173C END3P39013 349 aa2.46□□□□□ -2.02
RFA3YJL173C YFL040WP43562 540 aa2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms