RNA–Protein interactions for RNA: YJL041W

NSP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NSP1, Length 2,472 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NSP1YJL041W MHF1Q3E835 90 aa3.28□□□□□ -1.88
NSP1YJL041W SEC7P11075 2009 aaKnown RBP3.28□□□□□ -1.89
NSP1YJL041W RHO1P06780 209 aaKnown RBP3.27□□□□□ -1.89
NSP1YJL041W REV1P12689 985 aa3.27□□□□□ -1.89
NSP1YJL041W ATP10P18496 279 aa3.27□□□□□ -1.89
NSP1YJL041W PER1P25625 357 aa3.27□□□□□ -1.89
NSP1YJL041W COQ3P27680 312 aa3.27□□□□□ -1.89
NSP1YJL041W AEP1P32493 518 aa3.27□□□□□ -1.89
NSP1YJL041W ALY1P36117 915 aa3.27□□□□□ -1.89
NSP1YJL041W LAG1P38703 411 aa3.27□□□□□ -1.89
NSP1YJL041W FMO1P38866 432 aa3.27□□□□□ -1.89
NSP1YJL041W ISC1P40015 477 aaKnown RBP3.27□□□□□ -1.89
NSP1YJL041W COG3P40094 801 aa3.27□□□□□ -1.89
NSP1YJL041W ARG2P40360 574 aa3.27□□□□□ -1.89
NSP1YJL041W IRC7P43623 340 aa3.27□□□□□ -1.89
NSP1YJL041W TOS3P43637 560 aa3.27□□□□□ -1.89
NSP1YJL041W PKP2P53170 491 aa3.27□□□□□ -1.89
NSP1YJL041W SPC98P53540 846 aa3.27□□□□□ -1.89
NSP1YJL041W STP1Q00947 519 aa3.27□□□□□ -1.89
NSP1YJL041W RPA49Q01080 415 aaPredicted RBP3.27□□□□□ -1.89
NSP1YJL041W KIN4Q01919 800 aa3.27□□□□□ -1.89
NSP1YJL041W DYN2Q02647 92 aa3.27□□□□□ -1.89
NSP1YJL041W YPL080CQ02826 108 aa3.27□□□□□ -1.89
NSP1YJL041W MTQ2Q03920 221 aaPredicted RBP3.27□□□□□ -1.89
NSP1YJL041W YTH1Q06102 208 aaPredicted RBP3.27□□□□□ -1.89
NSP1YJL041W ATG39Q06159 398 aa3.27□□□□□ -1.89
NSP1YJL041W YPR174CQ06616 221 aaPredicted RBP3.27□□□□□ -1.89
NSP1YJL041W MMT2Q08970 484 aa3.27□□□□□ -1.89
NSP1YJL041W ENV7Q12003 364 aa3.27□□□□□ -1.89
NSP1YJL041W NDJ1Q12366 352 aa3.27□□□□□ -1.89
NSP1YJL041W CYC1P00044 109 aaPredicted RBP3.27□□□□□ -1.89
NSP1YJL041W SRD1P09007 221 aa3.27□□□□□ -1.89
NSP1YJL041W SAN1P22470 610 aa3.27□□□□□ -1.89
NSP1YJL041W YCR007CP25354 239 aa3.27□□□□□ -1.89
NSP1YJL041W PBN1P25580 416 aa3.27□□□□□ -1.89
NSP1YJL041W ARO2P28777 376 aaKnown RBP3.27□□□□□ -1.89
NSP1YJL041W FRE1P32791 686 aa3.27□□□□□ -1.89
NSP1YJL041W MCH2P36032 473 aa3.27□□□□□ -1.89
NSP1YJL041W KSP1P38691 1029 aaKnown RBP3.27□□□□□ -1.89
NSP1YJL041W EFM1P38732 585 aa3.27□□□□□ -1.89
NSP1YJL041W YPT35P38815 214 aaKnown RBP3.27□□□□□ -1.89
NSP1YJL041W CHS7P38843 316 aa3.27□□□□□ -1.89
NSP1YJL041W MGS1P40151 587 aa3.27□□□□□ -1.89
NSP1YJL041W PAU15P40585 124 aa3.27□□□□□ -1.89
NSP1YJL041W FAR3P46671 204 aa3.27□□□□□ -1.89
NSP1YJL041W GPI14P47088 403 aaKnown RBP3.27□□□□□ -1.89
NSP1YJL041W MCM22P47167 239 aa3.27□□□□□ -1.89
NSP1YJL041W TRM9P49957 279 aa3.27□□□□□ -1.89
NSP1YJL041W COG7P53195 279 aa3.27□□□□□ -1.89
NSP1YJL041W YGR168CP53293 376 aa3.27□□□□□ -1.89
NSP1YJL041W CUS2P53830 285 aaPredicted RBP3.27□□□□□ -1.89
NSP1YJL041W SNP1Q00916 300 aaPredicted RBP3.27□□□□□ -1.89
NSP1YJL041W MRPL1Q04599 285 aa3.27□□□□□ -1.89
NSP1YJL041W ERP1Q05359 219 aaKnown RBP3.27□□□□□ -1.89
NSP1YJL041W YLR036CQ07986 203 aa3.27□□□□□ -1.89
NSP1YJL041W THI20Q08224 551 aa3.27□□□□□ -1.89
NSP1YJL041W YPL119C-AQ3E751 87 aa3.27□□□□□ -1.89
NSP1YJL041W VMA9Q3E7B6 73 aa3.27□□□□□ -1.89
NSP1YJL041W PCC1Q3E833 88 aa3.27□□□□□ -1.89
NSP1YJL041W CBP1P07252 654 aa3.26□□□□□ -1.89
NSP1YJL041W GRX2P17695 143 aaKnown RBP3.26□□□□□ -1.89
NSP1YJL041W FUN14P18411 198 aa3.26□□□□□ -1.89
NSP1YJL041W RBK1P25332 333 aa3.26□□□□□ -1.89
NSP1YJL041W YCP4P25349 247 aaKnown RBP3.26□□□□□ -1.89
NSP1YJL041W LSB5P25369 354 aa3.26□□□□□ -1.89
NSP1YJL041W HEM12P32347 362 aaPredicted RBP3.26□□□□□ -1.89
NSP1YJL041W CLB6P32943 380 aa3.26□□□□□ -1.89
NSP1YJL041W PDX3P38075 228 aaKnown RBP3.26□□□□□ -1.89
NSP1YJL041W ZTA1P38230 334 aaKnown RBP3.26□□□□□ -1.89
NSP1YJL041W OSW5P40219 148 aa3.26□□□□□ -1.89
NSP1YJL041W GTS1P40956 396 aa3.26□□□□□ -1.89
NSP1YJL041W CHA4P43634 648 aa3.26□□□□□ -1.89
NSP1YJL041W BIT61P47041 543 aa3.26□□□□□ -1.89
NSP1YJL041W YJR012CP47087 207 aa3.26□□□□□ -1.89
NSP1YJL041W EFM3P47163 339 aa3.26□□□□□ -1.89
NSP1YJL041W ROG1P53118 685 aa3.26□□□□□ -1.89
NSP1YJL041W TIM21P53220 239 aa3.26□□□□□ -1.89
NSP1YJL041W SYF2P53277 215 aaPredicted RBP3.26□□□□□ -1.89
NSP1YJL041W YGR151CP53287 111 aa3.26□□□□□ -1.89
NSP1YJL041W YAP1802P53309 568 aa3.26□□□□□ -1.89
NSP1YJL041W MPA43P53583 542 aaPredicted RBP3.26□□□□□ -1.89
NSP1YJL041W APS2Q00381 147 aa3.26□□□□□ -1.89
NSP1YJL041W RNY1Q02933 434 aaKnown RBP3.26□□□□□ -1.89
NSP1YJL041W ODC1Q03028 310 aa3.26□□□□□ -1.89
NSP1YJL041W ELC1Q03071 99 aa3.26□□□□□ -1.89
NSP1YJL041W YAP6Q03935 383 aa3.26□□□□□ -1.89
NSP1YJL041W HSP31Q04432 237 aa3.26□□□□□ -1.89
NSP1YJL041W COQ10Q08058 207 aa3.26□□□□□ -1.89
NSP1YJL041W SAM4Q08985 325 aaKnown RBP3.26□□□□□ -1.89
NSP1YJL041W UPC2Q12151 913 aa3.26□□□□□ -1.89
NSP1YJL041W RRP42Q12277 265 aaPredicted RBP3.26□□□□□ -1.89
NSP1YJL041W FRE6Q12473 712 aa3.26□□□□□ -1.89
NSP1YJL041W PRM4Q12498 284 aa3.26□□□□□ -1.89
NSP1YJL041W ADH2P00331 348 aaKnown RBP3.26□□□□□ -1.89
NSP1YJL041W CDC9P04819 755 aa3.26□□□□□ -1.89
NSP1YJL041W MDH1P17505 334 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
NSP1YJL041W YSR3P23501 404 aa3.26□□□□□ -1.89
NSP1YJL041W RIM1P32445 135 aaKnown RBP3.26□□□□□ -1.89
NSP1YJL041W APT2P36973 181 aa3.26□□□□□ -1.89
NSP1YJL041W BNA4P38169 460 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms