RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W RMI1Q02685 241 aa1.85□□□□□ -2.11
RPL40AYIL148W SPO19Q03029 223 aa1.85□□□□□ -2.11
RPL40AYIL148W SNX41Q04053 625 aa1.85□□□□□ -2.11
RPL40AYIL148W UTP15Q04305 513 aaKnown RBP1.85□□□□□ -2.11
RPL40AYIL148W YMR111CQ04461 462 aaPredicted RBP1.85□□□□□ -2.11
RPL40AYIL148W RDL2Q08742 149 aaKnown RBP1.85□□□□□ -2.11
RPL40AYIL148W TAF10Q12030 206 aa1.85□□□□□ -2.11
RPL40AYIL148W SLM3Q12093 417 aa1.85□□□□□ -2.11
RPL40AYIL148W YPL245WQ12179 454 aaKnown RBP1.85□□□□□ -2.11
RPL40AYIL148W ILV1P00927 576 aaKnown RBP1.84□□□□□ -2.11
RPL40AYIL148W SPS100P13130 326 aa1.84□□□□□ -2.11
RPL40AYIL148W MRPL20P22354 195 aaPredicted RBP1.84□□□□□ -2.11
RPL40AYIL148W IFM1P25038 676 aa1.84□□□□□ -2.11
RPL40AYIL148W PDC2P32896 925 aa1.84□□□□□ -2.11
RPL40AYIL148W CBF5P33322 483 aaKnown RBP RIP-Chip data1.84□□□□□ -2.11not detected
RPL40AYIL148W TAE1P38340 232 aa1.84□□□□□ -2.11
RPL40AYIL148W RRT13P40042 185 aa1.84□□□□□ -2.11
RPL40AYIL148W RTT105P40063 208 aa1.84□□□□□ -2.11
RPL40AYIL148W MRX5P47007 382 aa1.84□□□□□ -2.11
RPL40AYIL148W SEH1P53011 349 aaKnown RBP1.84□□□□□ -2.11
RPL40AYIL148W FLC3P53121 802 aa1.84□□□□□ -2.11
RPL40AYIL148W OKP1P53298 406 aa1.84□□□□□ -2.11
RPL40AYIL148W YNL260CP53846 198 aa1.84□□□□□ -2.11
RPL40AYIL148W YNL050CP53952 270 aa1.84□□□□□ -2.11
RPL40AYIL148W GPN3Q06543 272 aa1.84□□□□□ -2.11
RPL40AYIL148W YLR012CQ07927 99 aa1.84□□□□□ -2.11
RPL40AYIL148W VIK1Q12045 647 aa1.84□□□□□ -2.11
RPL40AYIL148W MSS116P15424 664 aaKnown RBP1.83□□□□□ -2.12
RPL40AYIL148W VPS1P21576 704 aaKnown RBP1.83□□□□□ -2.12
RPL40AYIL148W ECT1P33412 323 aa1.83□□□□□ -2.12
RPL40AYIL148W YKL063CP35725 167 aa1.83□□□□□ -2.12
RPL40AYIL148W YKL162CP36052 402 aa1.83□□□□□ -2.12
RPL40AYIL148W MRPL27P36526 146 aaPredicted RBP1.83□□□□□ -2.12
RPL40AYIL148W DTR1P38125 572 aa1.83□□□□□ -2.12
RPL40AYIL148W HIS2P38635 335 aa1.83□□□□□ -2.12
RPL40AYIL148W VPS45P38932 577 aa1.83□□□□□ -2.12
RPL40AYIL148W SEO1P39709 593 aa1.83□□□□□ -2.12
RPL40AYIL148W ALD5P40047 520 aaKnown RBP1.83□□□□□ -2.12
RPL40AYIL148W PMT4P46971 762 aa1.83□□□□□ -2.12
RPL40AYIL148W GTO1P48239 356 aa1.83□□□□□ -2.12
RPL40AYIL148W ERV25P54837 211 aaKnown RBP1.83□□□□□ -2.12
RPL40AYIL148W SED5Q01590 340 aa1.83□□□□□ -2.12
RPL40AYIL148W YPL077CQ02831 240 aa1.83□□□□□ -2.12
RPL40AYIL148W API2Q04413 109 aa1.83□□□□□ -2.12
RPL40AYIL148W ERV41Q04651 352 aa1.83□□□□□ -2.12
RPL40AYIL148W FAR10Q06001 478 aa1.83□□□□□ -2.12
RPL40AYIL148W BCP1Q06338 283 aa1.83□□□□□ -2.12
RPL40AYIL148W BER1Q06688 274 aaKnown RBP1.83□□□□□ -2.12
RPL40AYIL148W ASR1Q06834 288 aa1.83□□□□□ -2.12
RPL40AYIL148W YOL029CQ08187 201 aa1.83□□□□□ -2.12
RPL40AYIL148W YOR376WQ08900 122 aa1.83□□□□□ -2.12
RPL40AYIL148W YPR064WQ12492 139 aa1.83□□□□□ -2.12
RPL40AYIL148W LAG2Q92325 660 aa1.83□□□□□ -2.12
RPL40AYIL148W DBP3P20447 523 aaKnown RBP1.82□□□□□ -2.12
RPL40AYIL148W GPI12P23797 304 aa1.82□□□□□ -2.12
RPL40AYIL148W MRPL6P32904 214 aa1.82□□□□□ -2.12
RPL40AYIL148W SMP1P38128 452 aa1.82□□□□□ -2.12
RPL40AYIL148W RFT1P38206 574 aaPredicted RBP1.82□□□□□ -2.12
RPL40AYIL148W CHL4P38907 458 aa1.82□□□□□ -2.12
RPL40AYIL148W FMP48P53233 369 aa1.82□□□□□ -2.12
RPL40AYIL148W INP1Q03694 420 aa1.82□□□□□ -2.12
RPL40AYIL148W TSA2Q04120 196 aa1.82□□□□□ -2.12
RPL40AYIL148W MRX8Q05473 314 aa1.82□□□□□ -2.12
RPL40AYIL148W ARC18Q05933 178 aaKnown RBP1.82□□□□□ -2.12
RPL40AYIL148W APC9Q12107 265 aa1.82□□□□□ -2.12
RPL40AYIL148W POM33Q12164 279 aa1.82□□□□□ -2.12
RPL40AYIL148W BI3Q9ZZW7 517 aa1.82□□□□□ -2.12
RPL40AYIL148W FLO11P08640 1367 aa1.82□□□□□ -2.12
RPL40AYIL148W ADH1P00330 348 aaKnown RBP1.81□□□□□ -2.12
RPL40AYIL148W TDH3P00359 332 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
RPL40AYIL148W SSA3P09435 649 aaKnown RBP1.81□□□□□ -2.12
RPL40AYIL148W OM45P16547 393 aa1.81□□□□□ -2.12
RPL40AYIL148W CKA2P19454 339 aa1.81□□□□□ -2.12
RPL40AYIL148W YSR3P23501 404 aa1.81□□□□□ -2.12
RPL40AYIL148W YKL187CP34231 750 aa1.81□□□□□ -2.12
RPL40AYIL148W MCH2P36032 473 aa1.81□□□□□ -2.12
RPL40AYIL148W MRPL37P36532 105 aa1.81□□□□□ -2.12
RPL40AYIL148W SOP4P39543 234 aaPredicted RBP1.81□□□□□ -2.12
RPL40AYIL148W CDC40P40968 455 aaPredicted RBP1.81□□□□□ -2.12
RPL40AYIL148W LOC1P43586 204 aaPredicted RBP1.81□□□□□ -2.12
RPL40AYIL148W MIC19P43594 170 aa1.81□□□□□ -2.12
RPL40AYIL148W COQ5P49017 307 aa1.81□□□□□ -2.12
RPL40AYIL148W MND1P53102 219 aa1.81□□□□□ -2.12
RPL40AYIL148W SDS23P53172 527 aa1.81□□□□□ -2.12
RPL40AYIL148W COG7P53195 279 aa1.81□□□□□ -2.12
RPL40AYIL148W VTI1Q04338 217 aa1.81□□□□□ -2.12
RPL40AYIL148W YAL067W-AQ8TGK6 75 aa1.81□□□□□ -2.12
RPL40AYIL148W TPI1P00942 248 aaKnown RBP1.8□□□□□ -2.12
RPL40AYIL148W RPL24AP04449 155 aaKnown RBP1.8□□□□□ -2.12
RPL40AYIL148W RPL31AP0C2H8 113 aaKnown RBP1.8□□□□□ -2.12
RPL40AYIL148W CDC13P32797 924 aaKnown RBP1.8□□□□□ -2.12
RPL40AYIL148W SKG6P32900 734 aaPredicted RBP1.8□□□□□ -2.12
RPL40AYIL148W TIP20P33891 701 aa1.8□□□□□ -2.12
RPL40AYIL148W YKL070WP36087 169 aa1.8□□□□□ -2.12
RPL40AYIL148W MEP1P40260 492 aa1.8□□□□□ -2.12
RPL40AYIL148W SLM1P40485 686 aa1.8□□□□□ -2.12
RPL40AYIL148W AGP3P43548 558 aa1.8□□□□□ -2.12
RPL40AYIL148W YGL118CP53132 145 aa1.8□□□□□ -2.12
RPL40AYIL148W BIO4P53630 237 aa1.8□□□□□ -2.12
RPL40AYIL148W MPP6P53725 186 aaPredicted RBP1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms