RNA–Protein interactions for RNA: YIL144W

NDC80, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene NDC80, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDC80YIL144W PXR1P53335 271 aaPredicted RBP2.94□□□□□ -1.94
NDC80YIL144W SED5Q01590 340 aa2.94□□□□□ -1.94
NDC80YIL144W ERP1Q05359 219 aaKnown RBP2.94□□□□□ -1.94
NDC80YIL144W ATG34Q12292 412 aa2.94□□□□□ -1.94
NDC80YIL144W PET494P07390 489 aaPredicted RBP2.93□□□□□ -1.94
NDC80YIL144W MRP1P10662 321 aaKnown RBP2.93□□□□□ -1.94
NDC80YIL144W ARF1P11076 181 aaKnown RBP2.93□□□□□ -1.94
NDC80YIL144W SEN2P16658 377 aa2.93□□□□□ -1.94
NDC80YIL144W FAR1P21268 830 aa2.93□□□□□ -1.94
NDC80YIL144W GIT1P25346 518 aa2.93□□□□□ -1.94
NDC80YIL144W RRP3P38712 501 aaKnown RBP2.93□□□□□ -1.94
NDC80YIL144W SOP4P39543 234 aaPredicted RBP2.93□□□□□ -1.94
NDC80YIL144W THO1P40040 218 aaKnown RBP2.93□□□□□ -1.94
NDC80YIL144W AGE2P40529 298 aa2.93□□□□□ -1.94
NDC80YIL144W YFL040WP43562 540 aa2.93□□□□□ -1.94
NDC80YIL144W ALE1Q08548 619 aa2.93□□□□□ -1.94
NDC80YIL144W YLL056CQ12177 298 aa2.93□□□□□ -1.94
NDC80YIL144W MRPL8P22353 238 aa2.92□□□□□ -1.94
NDC80YIL144W TPS2P31688 896 aaKnown RBP2.92□□□□□ -1.94
NDC80YIL144W SSO1P32867 290 aa2.92□□□□□ -1.94
NDC80YIL144W PMU1P36069 295 aa2.92□□□□□ -1.94
NDC80YIL144W MRX3P38172 270 aa2.92□□□□□ -1.94
NDC80YIL144W RFT1P38206 574 aaPredicted RBP2.92□□□□□ -1.94
NDC80YIL144W FIG1P38224 298 aa2.92□□□□□ -1.94
NDC80YIL144W LSM1P47017 172 aaKnown RBP2.92□□□□□ -1.94
NDC80YIL144W AZR1P50080 613 aa2.92□□□□□ -1.94
NDC80YIL144W PHB2P50085 310 aa2.92□□□□□ -1.94
NDC80YIL144W NIF3P53081 288 aa2.92□□□□□ -1.94
NDC80YIL144W CDC14Q00684 551 aa2.92□□□□□ -1.94
NDC80YIL144W CTF19Q02732 369 aa2.92□□□□□ -1.94
NDC80YIL144W YDC1Q02896 317 aa2.92□□□□□ -1.94
NDC80YIL144W PIR3Q03180 325 aa2.92□□□□□ -1.94
NDC80YIL144W VPS60Q03390 229 aa2.92□□□□□ -1.94
NDC80YIL144W ASR1Q06834 288 aa2.92□□□□□ -1.94
NDC80YIL144W NDE2Q07500 545 aa2.92□□□□□ -1.94
NDC80YIL144W YDL144CQ07589 356 aa2.92□□□□□ -1.94
NDC80YIL144W YAP7Q08182 245 aa2.92□□□□□ -1.94
NDC80YIL144W YPQ1Q12010 308 aa2.92□□□□□ -1.94
NDC80YIL144W ERP3Q12403 225 aa2.92□□□□□ -1.94
NDC80YIL144W SET6Q12529 373 aa2.92□□□□□ -1.94
NDC80YIL144W HIS1P00498 297 aaKnown RBP2.92□□□□□ -1.94
NDC80YIL144W NAM2P11325 894 aa2.92□□□□□ -1.94
NDC80YIL144W MTF1P14908 341 aaKnown RBP2.92□□□□□ -1.94
NDC80YIL144W SPO12P17123 173 aa2.92□□□□□ -1.94
NDC80YIL144W IDH1P28834 360 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
NDC80YIL144W MRPL6P32904 214 aa2.92□□□□□ -1.94
NDC80YIL144W IST2P38250 946 aa2.92□□□□□ -1.94
NDC80YIL144W RCK2P38623 610 aa2.92□□□□□ -1.94
NDC80YIL144W YER184CP39961 794 aa2.92□□□□□ -1.94
NDC80YIL144W YFR057WP43625 151 aa2.92□□□□□ -1.94
NDC80YIL144W HMS2P47175 358 aa2.92□□□□□ -1.94
NDC80YIL144W TIS11P47977 285 aa2.92□□□□□ -1.94
NDC80YIL144W NBP1P52919 319 aaPredicted RBP2.92□□□□□ -1.94
NDC80YIL144W YPL080CQ02826 108 aa2.92□□□□□ -1.94
NDC80YIL144W VBA1Q04301 562 aa2.92□□□□□ -1.94
NDC80YIL144W SEC13Q04491 297 aaKnown RBP2.92□□□□□ -1.94
NDC80YIL144W APC9Q12107 265 aa2.92□□□□□ -1.94
NDC80YIL144W TUS1Q06412 1307 aa2.91□□□□□ -1.94
NDC80YIL144W HIS4P00815 799 aaKnown RBP2.91□□□□□ -1.94
NDC80YIL144W RPL20AP0CX23 172 aaKnown RBP2.91□□□□□ -1.94
NDC80YIL144W RPL20BP0CX24 172 aaPredicted RBP2.91□□□□□ -1.94
NDC80YIL144W MCK1P21965 375 aaKnown RBP2.91□□□□□ -1.94
NDC80YIL144W TIP1P27654 210 aaPredicted RBP2.91□□□□□ -1.94
NDC80YIL144W NUP2P32499 720 aa2.91□□□□□ -1.94
NDC80YIL144W SWD2P36104 329 aaPredicted RBP2.91□□□□□ -1.94
NDC80YIL144W YBR137WP38276 179 aa2.91□□□□□ -1.94
NDC80YIL144W PRS2P38620 318 aaKnown RBP2.91□□□□□ -1.94
NDC80YIL144W IKI1P38874 309 aa2.91□□□□□ -1.94
NDC80YIL144W LYS1P38998 373 aaRIP-Chip data2.91□□□□□ -1.94not detected
NDC80YIL144W MST28P39552 234 aa2.91□□□□□ -1.94
NDC80YIL144W NPT1P39683 429 aaKnown RBP2.91□□□□□ -1.94
NDC80YIL144W DDI1P40087 428 aa2.91□□□□□ -1.94
NDC80YIL144W MMF1P40185 145 aaKnown RBP2.91□□□□□ -1.94
NDC80YIL144W ALG8P40351 577 aa2.91□□□□□ -1.94
NDC80YIL144W VEL1P53058 206 aa2.91□□□□□ -1.94
NDC80YIL144W YNR048WP53740 393 aa2.91□□□□□ -1.94
NDC80YIL144W YNL140CP53910 189 aa2.91□□□□□ -1.94
NDC80YIL144W PEX12Q04370 399 aa2.91□□□□□ -1.94
NDC80YIL144W SKI7Q08491 747 aaPredicted RBP2.91□□□□□ -1.94
NDC80YIL144W ESA1Q08649 445 aa2.91□□□□□ -1.94
NDC80YIL144W CSM4Q08955 156 aa2.91□□□□□ -1.94
NDC80YIL144W YAR066WP0CX18 203 aa2.91□□□□□ -1.94
NDC80YIL144W YHR214WP0CX19 203 aa2.91□□□□□ -1.94
NDC80YIL144W ATR1P13090 542 aa2.91□□□□□ -1.94
NDC80YIL144W ARF2P19146 181 aaKnown RBP2.91□□□□□ -1.94
NDC80YIL144W MNS1P32906 549 aa2.91□□□□□ -1.94
NDC80YIL144W NUF2P33895 451 aa2.91□□□□□ -1.94
NDC80YIL144W FRT2P39734 528 aa2.91□□□□□ -1.94
NDC80YIL144W YCH1P42937 148 aa2.91□□□□□ -1.94
NDC80YIL144W JHD2P47156 728 aaPredicted RBP2.91□□□□□ -1.94
NDC80YIL144W LST7P53237 242 aa2.91□□□□□ -1.94
NDC80YIL144W PEX10Q05568 337 aa2.91□□□□□ -1.94
NDC80YIL144W PLB3Q08108 686 aa2.91□□□□□ -1.94
NDC80YIL144W QCR2P07257 368 aa2.9□□□□□ -1.95
NDC80YIL144W RPS24AP0CX31 135 aaKnown RBP2.9□□□□□ -1.95
NDC80YIL144W RPS24BP0CX32 135 aaKnown RBP2.9□□□□□ -1.95
NDC80YIL144W SNA3P14359 133 aa2.9□□□□□ -1.95
NDC80YIL144W SAM2P19358 384 aaKnown RBP2.9□□□□□ -1.95
NDC80YIL144W LSB5P25369 354 aa2.9□□□□□ -1.95
NDC80YIL144W ACB1P31787 87 aa2.9□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms