RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W ABM1P47146 123 aa4.27□□□□□ -1.73
VPS29YHR012W YJR142WP47173 342 aa4.27□□□□□ -1.73
VPS29YHR012W SIP18P50263 79 aa4.27□□□□□ -1.73
VPS29YHR012W SHE4P51534 789 aa4.27□□□□□ -1.73
VPS29YHR012W SKP1P52286 194 aa4.27□□□□□ -1.73
VPS29YHR012W SBH2P52871 88 aa4.27□□□□□ -1.73
VPS29YHR012W MIG2P53035 382 aa4.27□□□□□ -1.73
VPS29YHR012W YGL235WP53071 178 aa4.27□□□□□ -1.73
VPS29YHR012W YGR168CP53293 376 aa4.27□□□□□ -1.73
VPS29YHR012W SNF12P53628 566 aa4.27□□□□□ -1.73
VPS29YHR012W PET191Q02772 108 aa4.27□□□□□ -1.73
VPS29YHR012W SSY1Q03770 852 aa4.27□□□□□ -1.73
VPS29YHR012W API2Q04413 109 aa4.27□□□□□ -1.73
VPS29YHR012W SEC13Q04491 297 aaKnown RBP4.27□□□□□ -1.73
VPS29YHR012W RNH1Q04740 348 aa4.27□□□□□ -1.73
VPS29YHR012W DBP9Q06218 594 aaKnown RBP4.27□□□□□ -1.73
VPS29YHR012W VPS36Q06696 566 aa4.27□□□□□ -1.73
VPS29YHR012W BTS1Q12051 335 aa4.27□□□□□ -1.73
VPS29YHR012W MRX4Q12467 430 aa4.27□□□□□ -1.73
VPS29YHR012W YOR343CQ12484 108 aa4.27□□□□□ -1.73
VPS29YHR012W MSS18P08593 268 aa4.26□□□□□ -1.73
VPS29YHR012W SEC12P11655 471 aa4.26□□□□□ -1.73
VPS29YHR012W UGA1P17649 471 aa4.26□□□□□ -1.73
VPS29YHR012W PET9P18239 318 aaKnown RBP4.26□□□□□ -1.73
VPS29YHR012W PWP1P21304 576 aaKnown RBP4.26□□□□□ -1.73
VPS29YHR012W EXG1P23776 448 aaKnown RBP4.26□□□□□ -1.73
VPS29YHR012W PEX3P28795 441 aa4.26□□□□□ -1.73
VPS29YHR012W HBS1P32769 611 aaKnown RBP4.26□□□□□ -1.73
VPS29YHR012W YKL071WP36086 256 aa4.26□□□□□ -1.73
VPS29YHR012W FZO1P38297 855 aa4.26□□□□□ -1.73
VPS29YHR012W YHR218WP38899 603 aa4.26□□□□□ -1.73
VPS29YHR012W KRE29P40026 464 aa4.26□□□□□ -1.73
VPS29YHR012W HPM1P40481 377 aa4.26□□□□□ -1.73
VPS29YHR012W YIL012WP40551 113 aa4.26□□□□□ -1.73
VPS29YHR012W DPB11P47027 764 aaPredicted RBP4.26□□□□□ -1.73
VPS29YHR012W ILM1P47155 203 aa4.26□□□□□ -1.73
VPS29YHR012W USE1P53146 245 aa4.26□□□□□ -1.73
VPS29YHR012W MPP6P53725 186 aaPredicted RBP4.26□□□□□ -1.73
VPS29YHR012W YNL033WP53964 284 aa4.26□□□□□ -1.73
VPS29YHR012W YNL019CP53975 284 aa4.26□□□□□ -1.73
VPS29YHR012W TPS1Q00764 495 aaKnown RBP4.26□□□□□ -1.73
VPS29YHR012W RRN5Q02983 363 aa4.26□□□□□ -1.73
VPS29YHR012W RSM28Q03430 361 aa4.26□□□□□ -1.73
VPS29YHR012W PEX12Q04370 399 aa4.26□□□□□ -1.73
VPS29YHR012W GTB1Q04924 702 aa4.26□□□□□ -1.73
VPS29YHR012W RNH202Q05635 350 aa4.26□□□□□ -1.73
VPS29YHR012W SNT309Q06091 175 aaPredicted RBP4.26□□□□□ -1.73
VPS29YHR012W ATG26Q06321 1198 aa4.26□□□□□ -1.73
VPS29YHR012W CRT10Q08226 957 aa4.26□□□□□ -1.73
VPS29YHR012W TMC1Q08422 150 aaPredicted RBP4.26□□□□□ -1.73
VPS29YHR012W OSW1Q08692 278 aa4.26□□□□□ -1.73
VPS29YHR012W SRL2Q12020 392 aa4.26□□□□□ -1.73
VPS29YHR012W MED2Q12124 431 aa4.26□□□□□ -1.73
VPS29YHR012W RPL15AP05748 204 aaKnown RBP4.25□□□□□ -1.73
VPS29YHR012W YPK2P18961 677 aa4.25□□□□□ -1.73
VPS29YHR012W CMK2P22517 447 aa4.25□□□□□ -1.73
VPS29YHR012W URE2P23202 354 aaKnown RBP4.25□□□□□ -1.73
VPS29YHR012W PRP28P23394 588 aa4.25□□□□□ -1.73
VPS29YHR012W SPC29P33419 253 aa4.25□□□□□ -1.73
VPS29YHR012W NIC96P34077 839 aa4.25□□□□□ -1.73
VPS29YHR012W YKL107WP34251 309 aa4.25□□□□□ -1.73
VPS29YHR012W YBR096WP38256 230 aa4.25□□□□□ -1.73
VPS29YHR012W AIM3P38266 947 aaKnown RBP4.25□□□□□ -1.73
VPS29YHR012W TRM5P38793 499 aa4.25□□□□□ -1.73
VPS29YHR012W YEL068CP39977 110 aa4.25□□□□□ -1.73
VPS29YHR012W PIG2P40187 538 aa4.25□□□□□ -1.73
VPS29YHR012W BAT2P47176 376 aaKnown RBP4.25□□□□□ -1.73
VPS29YHR012W IMD4P50094 524 aaKnown RBP4.25□□□□□ -1.73
VPS29YHR012W GPI1P53306 609 aa4.25□□□□□ -1.73
VPS29YHR012W MEP3P53390 489 aa4.25□□□□□ -1.73
VPS29YHR012W CRZ1P53968 678 aa4.25□□□□□ -1.73
VPS29YHR012W RPL15BP54780 204 aaPredicted RBP4.25□□□□□ -1.73
VPS29YHR012W BCP1Q06338 283 aa4.25□□□□□ -1.73
VPS29YHR012W WTM1Q12363 437 aaKnown RBP4.25□□□□□ -1.73
VPS29YHR012W ERP4Q12450 207 aa4.25□□□□□ -1.73
VPS29YHR012W YHR214C-EQ8TGK0 99 aa4.25□□□□□ -1.73
VPS29YHR012W REP1P03871 373 aa4.24□□□□□ -1.73
VPS29YHR012W MSW1P04803 379 aa4.24□□□□□ -1.73
VPS29YHR012W RPS16AP0CX51 143 aaKnown RBP4.24□□□□□ -1.73
VPS29YHR012W RPS16BP0CX52 143 aaKnown RBP4.24□□□□□ -1.73
VPS29YHR012W MRPL33P20084 86 aa4.24□□□□□ -1.73
VPS29YHR012W CLB4P24871 460 aa4.24□□□□□ -1.73
VPS29YHR012W GIT1P25346 518 aa4.24□□□□□ -1.73
VPS29YHR012W VMA3P25515 160 aa4.24□□□□□ -1.73
VPS29YHR012W POL4P25615 582 aa4.24□□□□□ -1.73
VPS29YHR012W PRE2P30656 287 aaKnown RBP4.24□□□□□ -1.73
VPS29YHR012W MDH3P32419 343 aaKnown RBP RIP-Chip data4.24□□□□□ -1.73not detected
VPS29YHR012W GDH2P33327 1092 aaKnown RBP4.24□□□□□ -1.73
VPS29YHR012W YBR197CP38306 217 aa4.24□□□□□ -1.73
VPS29YHR012W YHR219WP38900 624 aa4.24□□□□□ -1.73
VPS29YHR012W RBG1P39729 369 aa4.24□□□□□ -1.73
VPS29YHR012W YER084WP40057 128 aa4.24□□□□□ -1.73
VPS29YHR012W YNL195CP40168 261 aa4.24□□□□□ -1.73
VPS29YHR012W NOP9P47077 666 aaKnown RBP4.24□□□□□ -1.73
VPS29YHR012W YGL101WP53144 215 aa4.24□□□□□ -1.73
VPS29YHR012W GET1P53192 235 aa4.24□□□□□ -1.73
VPS29YHR012W YNR062CP53748 327 aa4.24□□□□□ -1.73
VPS29YHR012W MRP51Q02950 344 aa4.24□□□□□ -1.73
VPS29YHR012W YDR387CQ04162 555 aa4.24□□□□□ -1.73
VPS29YHR012W SNO4Q04902 237 aa4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms