RNA–Protein interactions for RNA: YHL002W

HSE1, Transcript of Subunit of the endosomal Vps27p-Hse1p complex, yeastyeast

Gene HSE1, Length 1,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSE1YHL002W NFI1Q12216 726 aa2.5□□□□□ -2.01
HSE1YHL002W ARO4P32449 370 aaKnown RBP2.49□□□□□ -2.01
HSE1YHL002W SDH4P37298 181 aa2.49□□□□□ -2.01
HSE1YHL002W CTM1P38818 585 aa2.49□□□□□ -2.01
HSE1YHL002W BUD13P46947 266 aaPredicted RBP2.49□□□□□ -2.01
HSE1YHL002W YGL114WP53134 725 aa2.49□□□□□ -2.01
HSE1YHL002W YGL088WP53151 121 aa2.49□□□□□ -2.01
HSE1YHL002W PXR1P53335 271 aaPredicted RBP2.49□□□□□ -2.01
HSE1YHL002W CSI1Q04368 295 aa2.49□□□□□ -2.01
HSE1YHL002W RDL2Q08742 149 aaKnown RBP2.49□□□□□ -2.01
HSE1YHL002W IES3Q12345 250 aa2.49□□□□□ -2.01
HSE1YHL002W TFC7Q12415 435 aa2.49□□□□□ -2.01
HSE1YHL002W SPO24Q3E752 67 aa2.49□□□□□ -2.01
HSE1YHL002W TAL1P15019 335 aaKnown RBP2.49□□□□□ -2.01
HSE1YHL002W VMA5P31412 392 aaKnown RBP2.49□□□□□ -2.01
HSE1YHL002W SMC2P38989 1170 aaKnown RBP2.49□□□□□ -2.01
HSE1YHL002W TAF6P53040 516 aa2.49□□□□□ -2.01
HSE1YHL002W YPL245WQ12179 454 aaKnown RBP2.49□□□□□ -2.01
HSE1YHL002W TRM10Q12400 293 aa2.49□□□□□ -2.01
HSE1YHL002W SPT7P35177 1332 aa2.48□□□□□ -2.01
HSE1YHL002W OPI1P21957 404 aa2.48□□□□□ -2.01
HSE1YHL002W MIG1P27705 504 aa2.48□□□□□ -2.01
HSE1YHL002W BUD2P33314 1104 aa2.48□□□□□ -2.01
HSE1YHL002W YFR045WP43617 309 aa2.48□□□□□ -2.01
HSE1YHL002W HSH155P49955 971 aaKnown RBP2.48□□□□□ -2.01
HSE1YHL002W YDR222WQ04925 415 aa2.48□□□□□ -2.01
HSE1YHL002W DXO1Q06349 442 aa2.48□□□□□ -2.01
HSE1YHL002W SGT2Q12118 346 aaKnown RBP2.48□□□□□ -2.01
HSE1YHL002W CBP2P03874 630 aaPredicted RBP2.47□□□□□ -2.01
HSE1YHL002W DAL81P21657 970 aa2.47□□□□□ -2.01
HSE1YHL002W POT1P27796 417 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
HSE1YHL002W ACB1P31787 87 aa2.47□□□□□ -2.01
HSE1YHL002W SHE4P51534 789 aa2.47□□□□□ -2.01
HSE1YHL002W YGR016WP53209 190 aa2.47□□□□□ -2.01
HSE1YHL002W YPL113CQ02961 396 aa2.47□□□□□ -2.01
HSE1YHL002W RLP24Q07915 199 aaKnown RBP2.47□□□□□ -2.01
HSE1YHL002W ERP3Q12403 225 aa2.47□□□□□ -2.01
HSE1YHL002W MET2P08465 486 aa2.46□□□□□ -2.02
HSE1YHL002W ERD1P16151 362 aa2.46□□□□□ -2.02
HSE1YHL002W TPM1P17536 199 aaKnown RBP2.46□□□□□ -2.02
HSE1YHL002W VPH1P32563 840 aaKnown RBP2.46□□□□□ -2.02
HSE1YHL002W CSE1P33307 960 aa2.46□□□□□ -2.02
HSE1YHL002W SIF2P38262 535 aa2.46□□□□□ -2.02
HSE1YHL002W MED8P38304 223 aa2.46□□□□□ -2.02
HSE1YHL002W SCC4P40090 624 aa2.46□□□□□ -2.02
HSE1YHL002W YIL089WP40500 205 aa2.46□□□□□ -2.02
HSE1YHL002W ECO1P43605 281 aa2.46□□□□□ -2.02
HSE1YHL002W FYV8P46949 817 aaKnown RBP2.46□□□□□ -2.02
HSE1YHL002W YNR066CP53752 436 aa2.46□□□□□ -2.02
HSE1YHL002W RVB1Q03940 463 aaKnown RBP2.46□□□□□ -2.02
HSE1YHL002W YDR114CQ04597 100 aa2.46□□□□□ -2.02
HSE1YHL002W BUR2Q05949 395 aa2.46□□□□□ -2.02
HSE1YHL002W SUR1P33300 382 aa2.45□□□□□ -2.02
HSE1YHL002W PET8P38921 284 aa2.45□□□□□ -2.02
HSE1YHL002W EDC2P40023 145 aaPredicted RBP2.45□□□□□ -2.02
HSE1YHL002W ACT1P60010 375 aaKnown RBP2.45□□□□□ -2.02
HSE1YHL002W YPL080CQ02826 108 aa2.45□□□□□ -2.02
HSE1YHL002W YLR012CQ07927 99 aa2.45□□□□□ -2.02
HSE1YHL002W PML1Q07930 204 aaPredicted RBP2.45□□□□□ -2.02
HSE1YHL002W YDR262WQ12331 272 aa2.45□□□□□ -2.02
HSE1YHL002W YKR032WP36127 104 aa2.44□□□□□ -2.02
HSE1YHL002W CAJ1P39101 391 aa2.44□□□□□ -2.02
HSE1YHL002W YNL040WP53960 456 aaPredicted RBP2.43□□□□□ -2.02
HSE1YHL002W YGR168CP53293 376 aa2.42□□□□□ -2.02
HSE1YHL002W MIX17Q03667 156 aa2.42□□□□□ -2.02
HSE1YHL002W UBX2Q04228 584 aa2.42□□□□□ -2.02
HSE1YHL002W YOR292CQ08743 309 aa2.42□□□□□ -2.02
HSE1YHL002W VIK1Q12045 647 aa2.42□□□□□ -2.02
HSE1YHL002W MRX4Q12467 430 aa2.42□□□□□ -2.02
HSE1YHL002W KRR1P25586 316 aaPredicted RBP2.41□□□□□ -2.02
HSE1YHL002W RNR2P09938 399 aaKnown RBP2.4□□□□□ -2.02
HSE1YHL002W KRE1P17260 313 aa2.4□□□□□ -2.02
HSE1YHL002W YEL043WP32618 956 aa2.4□□□□□ -2.02
HSE1YHL002W AIM29P36154 155 aa2.4□□□□□ -2.02
HSE1YHL002W PDR16P53860 351 aaKnown RBP2.4□□□□□ -2.02
HSE1YHL002W IRC4Q03036 179 aa2.4□□□□□ -2.02
HSE1YHL002W CLP1Q08685 445 aaPredicted RBP2.4□□□□□ -2.02
HSE1YHL002W PSY3Q12318 242 aa2.4□□□□□ -2.02
HSE1YHL002W RPL18AP0CX49 186 aaKnown RBP2.39□□□□□ -2.03
HSE1YHL002W RPL18BP0CX50 186 aaKnown RBP2.39□□□□□ -2.03
HSE1YHL002W VMA2P16140 517 aaKnown RBP2.39□□□□□ -2.03
HSE1YHL002W RSA4P25382 515 aaKnown RBP2.39□□□□□ -2.03
HSE1YHL002W UIP5P36137 443 aa2.39□□□□□ -2.03
HSE1YHL002W LIN1P38852 340 aaPredicted RBP2.39□□□□□ -2.03
HSE1YHL002W SOP4P39543 234 aaPredicted RBP2.39□□□□□ -2.03
HSE1YHL002W ARC18Q05933 178 aaKnown RBP2.39□□□□□ -2.03
HSE1YHL002W PGC1Q08959 321 aa2.39□□□□□ -2.03
HSE1YHL002W TDH2P00358 332 aaKnown RBP2.38□□□□□ -2.03
HSE1YHL002W TDH3P00359 332 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
HSE1YHL002W CDC42P19073 191 aa2.38□□□□□ -2.03
HSE1YHL002W PRE7P23724 241 aaKnown RBP2.38□□□□□ -2.03
HSE1YHL002W MRPL6P32904 214 aa2.38□□□□□ -2.03
HSE1YHL002W PES4P39684 611 aa2.38□□□□□ -2.03
HSE1YHL002W UFD1P53044 361 aa2.38□□□□□ -2.03
HSE1YHL002W SNX41Q04053 625 aa2.38□□□□□ -2.03
HSE1YHL002W SEC13Q04491 297 aaKnown RBP2.38□□□□□ -2.03
HSE1YHL002W YAK1P14680 807 aa2.37□□□□□ -2.03
HSE1YHL002W VPH2P32341 215 aa2.37□□□□□ -2.03
HSE1YHL002W SMI1P32566 505 aa2.37□□□□□ -2.03
HSE1YHL002W YHR035WP38769 630 aa2.37□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms