RNA–Protein interactions for RNA: YGR213C

RTA1, Transcript of Protein involved in 7-aminocholesterol resistance, yeast

Gene RTA1, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTA1	YGR213C	RSM27	P53305	110 aa		3.76	□□□□□ -1.81
RTA1	YGR213C	RPT4	P53549	437 aa	Known RBP	3.76	□□□□□ -1.81
RTA1	YGR213C	TIM10	P87108	93 aa		3.76	□□□□□ -1.81
RTA1	YGR213C	UTP6	Q02354	440 aa	Known RBP	3.76	□□□□□ -1.81
RTA1	YGR213C	YDR249C	Q03787	373 aa		3.76	□□□□□ -1.81
RTA1	YGR213C	AIM32	Q04689	311 aa		3.76	□□□□□ -1.81
RTA1	YGR213C	BUR2	Q05949	395 aa		3.76	□□□□□ -1.81
RTA1	YGR213C	THP1	Q08231	455 aa		3.76	□□□□□ -1.81
RTA1	YGR213C	YPR063C	Q12160	140 aa		3.76	□□□□□ -1.81
RTA1	YGR213C	YDR061W	Q12298	539 aa		3.76	□□□□□ -1.81
RTA1	YGR213C	SNF8	Q12483	233 aa		3.76	□□□□□ -1.81
RTA1	YGR213C	YHR213W-A	Q8TGT4	77 aa		3.76	□□□□□ -1.81
RTA1	YGR213C	ARG4	P04076	463 aa	Predicted RBP	3.75	□□□□□ -1.81
RTA1	YGR213C	QCR2	P07257	368 aa		3.75	□□□□□ -1.81
RTA1	YGR213C	COS2	P0CX12	379 aa		3.75	□□□□□ -1.81
RTA1	YGR213C	COS3	P0CX13	379 aa		3.75	□□□□□ -1.81
RTA1	YGR213C	MRP1	P10662	321 aa	Known RBP	3.75	□□□□□ -1.81
RTA1	YGR213C	UNG1	P12887	359 aa		3.75	□□□□□ -1.81
RTA1	YGR213C	PET9	P18239	318 aa	Known RBP	3.75	□□□□□ -1.81
RTA1	YGR213C	SNF6	P18888	332 aa		3.75	□□□□□ -1.81
RTA1	YGR213C	CPR4	P25334	318 aa		3.75	□□□□□ -1.81
RTA1	YGR213C	YCR007C	P25354	239 aa		3.75	□□□□□ -1.81
RTA1	YGR213C	TFC1	P32367	649 aa		3.75	□□□□□ -1.81
RTA1	YGR213C	CDC13	P32797	924 aa	Known RBP	3.75	□□□□□ -1.81
RTA1	YGR213C	MNS1	P32906	549 aa		3.75	□□□□□ -1.81
RTA1	YGR213C	PTC1	P35182	281 aa		3.75	□□□□□ -1.81
RTA1	YGR213C	KKQ8	P36004	724 aa		3.75	□□□□□ -1.81
RTA1	YGR213C	JEN1	P36035	616 aa		3.75	□□□□□ -1.81
RTA1	YGR213C	SKG1	P36169	355 aa		3.75	□□□□□ -1.81
RTA1	YGR213C	RIB5	P38145	238 aa		3.75	□□□□□ -1.81
RTA1	YGR213C	TCM62	P38228	572 aa	Known RBP	3.75	□□□□□ -1.81
RTA1	YGR213C	AME1	P38313	324 aa		3.75	□□□□□ -1.81
RTA1	YGR213C	COS8	P38723	381 aa		3.75	□□□□□ -1.81
RTA1	YGR213C	WSS1	P38838	269 aa		3.75	□□□□□ -1.81
RTA1	YGR213C	VPS52	P39904	641 aa		3.75	□□□□□ -1.81
RTA1	YGR213C	RFC4	P40339	323 aa	Known RBP	3.75	□□□□□ -1.81
RTA1	YGR213C	MIC19	P43594	170 aa		3.75	□□□□□ -1.81
RTA1	YGR213C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.75	□□□□□ -1.81	not detected
RTA1	YGR213C	YJR030C	P47101	745 aa		3.75	□□□□□ -1.81
RTA1	YGR213C	YPT32	P51996	222 aa	Known RBP	3.75	□□□□□ -1.81
RTA1	YGR213C	UFD1	P53044	361 aa		3.75	□□□□□ -1.81
RTA1	YGR213C	YGR117C	P53270	476 aa		3.75	□□□□□ -1.81
RTA1	YGR213C	CUS2	P53830	285 aa	Predicted RBP	3.75	□□□□□ -1.81
RTA1	YGR213C	RHO3	Q00245	231 aa	Known RBP	3.75	□□□□□ -1.81
RTA1	YGR213C	TRM82	Q03774	444 aa		3.75	□□□□□ -1.81
RTA1	YGR213C	YLR413W	Q06689	675 aa		3.75	□□□□□ -1.81
RTA1	YGR213C	SFM1	Q12314	213 aa		3.75	□□□□□ -1.81
RTA1	YGR213C	YDR262W	Q12331	272 aa		3.75	□□□□□ -1.81
RTA1	YGR213C	STE2	D6VTK4	431 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	HTB1	P02293	131 aa	Known RBP	3.74	□□□□□ -1.81
RTA1	YGR213C	HTB2	P02294	131 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	RPL15A	P05748	204 aa	Known RBP	3.74	□□□□□ -1.81
RTA1	YGR213C	RPL27A	P0C2H6	136 aa	Known RBP	3.74	□□□□□ -1.81
RTA1	YGR213C	RPL27B	P0C2H7	136 aa	Known RBP	3.74	□□□□□ -1.81
RTA1	YGR213C	IMA3	P0CW40	589 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	IMA4	P0CW41	589 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	URA6	P15700	204 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	YIM1	P28625	365 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	PRR1	P28708	518 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	GPI10	P30777	616 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	VMA5	P31412	392 aa	Known RBP	3.74	□□□□□ -1.81
RTA1	YGR213C	PHA2	P32452	334 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	NDC1	P32500	655 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	PRP21	P32524	280 aa	Predicted RBP	3.74	□□□□□ -1.81
RTA1	YGR213C	LHP1	P33399	275 aa	Known RBP	3.74	□□□□□ -1.81
RTA1	YGR213C	RPS1A	P33442	255 aa	Known RBP	3.74	□□□□□ -1.81
RTA1	YGR213C	YOX1	P34161	385 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	CLG1	P35190	452 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	RPC25	P35718	212 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	SHE3	P38272	425 aa	Known RBP	3.74	□□□□□ -1.81
RTA1	YGR213C	URA8	P38627	578 aa	Predicted RBP	3.74	□□□□□ -1.81
RTA1	YGR213C	YMR147W	P40218	223 aa	Known RBP	3.74	□□□□□ -1.81
RTA1	YGR213C	LCB2	P40970	561 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	HXT14	P42833	540 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	AGP3	P43548	558 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	FMP33	P46998	180 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	PET130	P47065	347 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	MOG1	P47123	218 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	ADO1	P47143	340 aa	Known RBP	3.74	□□□□□ -1.81
RTA1	YGR213C	YNR062C	P53748	327 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	OAZ1	Q02803	292 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	ACL4	Q03771	387 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	YDR239C	Q03780	787 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	YDR248C	Q03786	193 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	ERP1	Q05359	219 aa	Known RBP	3.74	□□□□□ -1.81
RTA1	YGR213C	RQC1	Q05468	723 aa	Known RBP	3.74	□□□□□ -1.81
RTA1	YGR213C	YTH1	Q06102	208 aa	Predicted RBP	3.74	□□□□□ -1.81
RTA1	YGR213C	NEJ1	Q06148	342 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	FRQ1	Q06389	190 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	3.74	□□□□□ -1.81	not detected
RTA1	YGR213C	IMA2	Q08295	589 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	YPL257W	Q08974	193 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	YDL009C	Q12210	107 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	RRP42	Q12277	265 aa	Predicted RBP	3.74	□□□□□ -1.81
RTA1	YGR213C	HRT3	Q12347	344 aa		3.74	□□□□□ -1.81
RTA1	YGR213C	POL1	P13382	1468 aa		3.73	□□□□□ -1.81
RTA1	YGR213C	RAD10	P06838	210 aa		3.73	□□□□□ -1.81
RTA1	YGR213C	LPD1	P09624	499 aa	Known RBP	3.73	□□□□□ -1.81
RTA1	YGR213C	NFT1	P0CE68	1218 aa		3.73	□□□□□ -1.81
RTA1	YGR213C	SCH9	P11792	824 aa	Known RBP	3.73	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 38.3 ms