RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W VMA16P23968 213 aa3.43□□□□□ -1.86
SPT6YGR116W RPD3P32561 433 aa3.43□□□□□ -1.86
SPT6YGR116W YPT31P38555 223 aaKnown RBP3.43□□□□□ -1.86
SPT6YGR116W LYS12P40495 371 aaKnown RBP3.43□□□□□ -1.86
SPT6YGR116W ADO1P47143 340 aaKnown RBP3.43□□□□□ -1.86
SPT6YGR116W NUP57P48837 541 aa3.43□□□□□ -1.86
SPT6YGR116W RDR1Q08904 546 aa3.43□□□□□ -1.86
SPT6YGR116W UBR1P19812 1950 aa3.43□□□□□ -1.86
SPT6YGR116W CDC28P00546 298 aaKnown RBP3.43□□□□□ -1.86
SPT6YGR116W MSF1P08425 469 aa3.43□□□□□ -1.86
SPT6YGR116W MRP1P10662 321 aaKnown RBP3.43□□□□□ -1.86
SPT6YGR116W POX1P13711 748 aa3.43□□□□□ -1.86
SPT6YGR116W YUR1P26725 428 aa3.43□□□□□ -1.86
SPT6YGR116W PPG1P32838 368 aa3.43□□□□□ -1.86
SPT6YGR116W PRP39P39682 629 aaKnown RBP3.43□□□□□ -1.86
SPT6YGR116W SMB1P40018 196 aaKnown RBP3.43□□□□□ -1.86
SPT6YGR116W VMA21P41806 77 aa3.43□□□□□ -1.86
SPT6YGR116W EAF6P47128 113 aa3.43□□□□□ -1.86
SPT6YGR116W VPS25P47142 202 aa3.43□□□□□ -1.86
SPT6YGR116W SAM37P50110 327 aa3.43□□□□□ -1.86
SPT6YGR116W TIM21P53220 239 aa3.43□□□□□ -1.86
SPT6YGR116W COQ6P53318 479 aa3.43□□□□□ -1.86
SPT6YGR116W YNR065CP53751 1116 aa3.43□□□□□ -1.86
SPT6YGR116W MSC1Q03104 513 aa3.43□□□□□ -1.86
SPT6YGR116W RSM10Q03201 203 aa3.43□□□□□ -1.86
SPT6YGR116W RRP45Q05636 305 aaKnown RBP3.43□□□□□ -1.86
SPT6YGR116W YPR114WQ06107 315 aa3.43□□□□□ -1.86
SPT6YGR116W PLB3Q08108 686 aa3.43□□□□□ -1.86
SPT6YGR116W TPO4Q12256 659 aa3.43□□□□□ -1.86
SPT6YGR116W YDR461C-AQ2V2P7 80 aa3.43□□□□□ -1.86
SPT6YGR116W PRB1P09232 635 aa3.42□□□□□ -1.86
SPT6YGR116W PUT1P09368 476 aa3.42□□□□□ -1.86
SPT6YGR116W TY2A-LR1P0C2J4 438 aa3.42□□□□□ -1.86
SPT6YGR116W YML003WP0CF16 290 aa3.42□□□□□ -1.86
SPT6YGR116W TY2A-FP0CX61 438 aa3.42□□□□□ -1.86
SPT6YGR116W TY2A-GR2P0CX62 438 aa3.42□□□□□ -1.86
SPT6YGR116W EPT1P22140 391 aa3.42□□□□□ -1.86
SPT6YGR116W TY2A-CP25383 438 aa3.42□□□□□ -1.86
SPT6YGR116W BUB3P26449 341 aa3.42□□□□□ -1.86
SPT6YGR116W HXT4P32467 576 aa3.42□□□□□ -1.86
SPT6YGR116W SPS19P32573 292 aaKnown RBP3.42□□□□□ -1.86
SPT6YGR116W CLB6P32943 380 aa3.42□□□□□ -1.86
SPT6YGR116W YNK1P36010 153 aaKnown RBP3.42□□□□□ -1.86
SPT6YGR116W EMC3P36039 253 aa3.42□□□□□ -1.86
SPT6YGR116W MRPL37P36532 105 aa3.42□□□□□ -1.86
SPT6YGR116W SCO2P38072 301 aa3.42□□□□□ -1.86
SPT6YGR116W POP8P38208 133 aa3.42□□□□□ -1.86
SPT6YGR116W TAT2P38967 592 aa3.42□□□□□ -1.86
SPT6YGR116W PTC2P39966 464 aaKnown RBP3.42□□□□□ -1.86
SPT6YGR116W LYS20P48570 428 aaKnown RBP3.42□□□□□ -1.86
SPT6YGR116W PKP2P53170 491 aa3.42□□□□□ -1.86
SPT6YGR116W YGR015CP53208 328 aa3.42□□□□□ -1.86
SPT6YGR116W SNO1Q03144 224 aa3.42□□□□□ -1.86
SPT6YGR116W TY2A-DR2Q03483 438 aa3.42□□□□□ -1.86
SPT6YGR116W SWF1Q04629 336 aa3.42□□□□□ -1.86
SPT6YGR116W CIA1Q05583 330 aa3.42□□□□□ -1.86
SPT6YGR116W YLR225CQ05948 407 aaKnown RBP3.42□□□□□ -1.86
SPT6YGR116W ECM22Q05958 814 aaPredicted RBP3.42□□□□□ -1.86
SPT6YGR116W KEI1Q06346 221 aa3.42□□□□□ -1.86
SPT6YGR116W MHR1Q06630 226 aa3.42□□□□□ -1.86
SPT6YGR116W TMS1Q12116 473 aa3.42□□□□□ -1.86
SPT6YGR116W TY2A-BQ12260 438 aa3.42□□□□□ -1.86
SPT6YGR116W TY2A-OR2Q12293 438 aa3.42□□□□□ -1.86
SPT6YGR116W TY2A-DR1Q12392 438 aa3.42□□□□□ -1.86
SPT6YGR116W TY2A-OR1Q12439 438 aa3.42□□□□□ -1.86
SPT6YGR116W TY2A-DR3Q99303 438 aa3.42□□□□□ -1.86
SPT6YGR116W YOR338WQ99326 363 aa3.42□□□□□ -1.86
SPT6YGR116W ADH3P07246 375 aaKnown RBP3.42□□□□□ -1.86
SPT6YGR116W COX9P07255 59 aa3.42□□□□□ -1.86
SPT6YGR116W APA1P16550 321 aaKnown RBP3.42□□□□□ -1.86
SPT6YGR116W SLM5P25345 492 aaKnown RBP3.42□□□□□ -1.86
SPT6YGR116W ATS1P31386 333 aa3.42□□□□□ -1.86
SPT6YGR116W SCM4P32564 187 aa3.42□□□□□ -1.86
SPT6YGR116W CSE2P33308 149 aa3.42□□□□□ -1.86
SPT6YGR116W SGE1P33335 543 aa3.42□□□□□ -1.86
SPT6YGR116W SOL2P37262 315 aa3.42□□□□□ -1.86
SPT6YGR116W RIB5P38145 238 aa3.42□□□□□ -1.86
SPT6YGR116W SRO77P38163 1010 aa3.42□□□□□ -1.86
SPT6YGR116W RPL10P41805 221 aaKnown RBP3.42□□□□□ -1.86
SPT6YGR116W TRM112P53738 135 aaPredicted RBP3.42□□□□□ -1.86
SPT6YGR116W PGA1P53896 198 aa3.42□□□□□ -1.86
SPT6YGR116W OCA2P53949 197 aa3.42□□□□□ -1.86
SPT6YGR116W SMA2Q04658 369 aa3.42□□□□□ -1.86
SPT6YGR116W DCI1Q08558 271 aa3.42□□□□□ -1.86
SPT6YGR116W ADE1P27616 306 aa3.42□□□□□ -1.86
SPT6YGR116W NAB2P32505 525 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
SPT6YGR116W DRE2P36152 348 aa3.42□□□□□ -1.86
SPT6YGR116W THI2P38141 450 aa3.42□□□□□ -1.86
SPT6YGR116W TCM62P38228 572 aaKnown RBP3.42□□□□□ -1.86
SPT6YGR116W MGE1P38523 228 aa3.42□□□□□ -1.86
SPT6YGR116W SUR2P38992 349 aa3.42□□□□□ -1.86
SPT6YGR116W ART5P53244 586 aaKnown RBP3.42□□□□□ -1.86
SPT6YGR116W GPI15P53961 229 aa3.42□□□□□ -1.86
SPT6YGR116W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
SPT6YGR116W BOP2Q06150 570 aa3.42□□□□□ -1.86
SPT6YGR116W BER1Q06688 274 aaKnown RBP3.42□□□□□ -1.86
SPT6YGR116W PHO2P07269 559 aa3.42□□□□□ -1.86
SPT6YGR116W YPK2P18961 677 aa3.42□□□□□ -1.86
SPT6YGR116W CDC50P25656 391 aa3.42□□□□□ -1.86
SPT6YGR116W YIM1P28625 365 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 62 ms