RNA–Protein interactions for RNA: YGR039W

YGR039W, Transcript of Dubious open reading frame, yeast

Gene YGR039W, Length 312 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YGR039W	YGR039W	PFS1	P38872	237 aa		2.8	□□□□□ -1.96
YGR039W	YGR039W	RPH1	P39956	796 aa		2.8	□□□□□ -1.96
YGR039W	YGR039W	DDI1	P40087	428 aa		2.8	□□□□□ -1.96
YGR039W	YGR039W	HIT1	P46973	164 aa		2.8	□□□□□ -1.96
YGR039W	YGR039W	LCB3	P47013	409 aa		2.8	□□□□□ -1.96
YGR039W	YGR039W	HAM1	P47119	197 aa	Known RBP	2.8	□□□□□ -1.96
YGR039W	YGR039W	SUR7	P54003	302 aa		2.8	□□□□□ -1.96
YGR039W	YGR039W	SLT2	Q00772	484 aa		2.8	□□□□□ -1.96
YGR039W	YGR039W	SMD2	Q06217	110 aa	Known RBP	2.8	□□□□□ -1.96
YGR039W	YGR039W	TSR1	Q07381	788 aa	Known RBP	2.8	□□□□□ -1.96
YGR039W	YGR039W	NDE2	Q07500	545 aa		2.8	□□□□□ -1.96
YGR039W	YGR039W	YDL114W	Q07530	308 aa		2.8	□□□□□ -1.96
YGR039W	YGR039W	CLP1	Q08685	445 aa	Predicted RBP	2.8	□□□□□ -1.96
YGR039W	YGR039W	YDL109C	Q12103	647 aa		2.8	□□□□□ -1.96
YGR039W	YGR039W	RPP0	P05317	312 aa	Known RBP	2.79	□□□□□ -1.96
YGR039W	YGR039W	CDC33	P07260	213 aa	Known RBP	2.79	□□□□□ -1.96
YGR039W	YGR039W	ZRC1	P20107	442 aa		2.79	□□□□□ -1.96
YGR039W	YGR039W	RPL16A	P26784	199 aa	Known RBP	2.79	□□□□□ -1.96
YGR039W	YGR039W	IES6	P32617	166 aa		2.79	□□□□□ -1.96
YGR039W	YGR039W	YKL063C	P35725	167 aa		2.79	□□□□□ -1.96
YGR039W	YGR039W	CAB3	P36076	571 aa		2.79	□□□□□ -1.96
YGR039W	YGR039W	MRX3	P38172	270 aa		2.79	□□□□□ -1.96
YGR039W	YGR039W	PRS2	P38620	318 aa	Known RBP	2.79	□□□□□ -1.96
YGR039W	YGR039W	SOP4	P39543	234 aa	Predicted RBP	2.79	□□□□□ -1.96
YGR039W	YGR039W	DFG10	P40526	253 aa		2.79	□□□□□ -1.96
YGR039W	YGR039W	YIL029C	P40538	142 aa		2.79	□□□□□ -1.96
YGR039W	YGR039W	YNL320W	P42840	284 aa		2.79	□□□□□ -1.96
YGR039W	YGR039W	NCA3	P46955	337 aa		2.79	□□□□□ -1.96
YGR039W	YGR039W	CDH1	P53197	566 aa		2.79	□□□□□ -1.96
YGR039W	YGR039W	VHT1	P53241	593 aa		2.79	□□□□□ -1.96
YGR039W	YGR039W	CPD1	P53314	239 aa		2.79	□□□□□ -1.96
YGR039W	YGR039W	MTM1	P53320	366 aa		2.79	□□□□□ -1.96
YGR039W	YGR039W	MRPL50	P53724	139 aa		2.79	□□□□□ -1.96
YGR039W	YGR039W	WSC2	P53832	503 aa		2.79	□□□□□ -1.96
YGR039W	YGR039W	YNL040W	P53960	456 aa	Predicted RBP	2.79	□□□□□ -1.96
YGR039W	YGR039W	BNA7	Q04066	261 aa		2.79	□□□□□ -1.96
YGR039W	YGR039W	KRE28	Q04431	385 aa		2.79	□□□□□ -1.96
YGR039W	YGR039W	SPO77	Q06134	477 aa		2.79	□□□□□ -1.96
YGR039W	YGR039W	LOT6	Q07923	191 aa		2.79	□□□□□ -1.96
YGR039W	YGR039W	YOR387C	Q08910	206 aa		2.79	□□□□□ -1.96
YGR039W	YGR039W	FCY22	Q12119	530 aa		2.79	□□□□□ -1.96
YGR039W	YGR039W	POM33	Q12164	279 aa		2.79	□□□□□ -1.96
YGR039W	YGR039W	YDL199C	Q12407	687 aa		2.79	□□□□□ -1.96
YGR039W	YGR039W	IZH4	Q99393	312 aa		2.79	□□□□□ -1.96
YGR039W	YGR039W	PIS1	P06197	220 aa	Known RBP	2.78	□□□□□ -1.96
YGR039W	YGR039W	RPL23A	P0CX41	137 aa	Known RBP	2.78	□□□□□ -1.96
YGR039W	YGR039W	RPL23B	P0CX42	137 aa	Known RBP	2.78	□□□□□ -1.96
YGR039W	YGR039W	TCP1	P12612	559 aa	Known RBP	2.78	□□□□□ -1.96
YGR039W	YGR039W	REV1	P12689	985 aa		2.78	□□□□□ -1.96
YGR039W	YGR039W	SPS100	P13130	326 aa		2.78	□□□□□ -1.96
YGR039W	YGR039W	CPR1	P14832	162 aa	Known RBP	2.78	□□□□□ -1.96
YGR039W	YGR039W	CBS2	P14905	389 aa		2.78	□□□□□ -1.96
YGR039W	YGR039W	FUS3	P16892	353 aa	Known RBP	2.78	□□□□□ -1.96
YGR039W	YGR039W	COQ1	P18900	473 aa		2.78	□□□□□ -1.96
YGR039W	YGR039W	YPK2	P18961	677 aa		2.78	□□□□□ -1.96
YGR039W	YGR039W	MCK1	P21965	375 aa	Known RBP	2.78	□□□□□ -1.96
YGR039W	YGR039W	POF1	P25576	258 aa		2.78	□□□□□ -1.96
YGR039W	YGR039W	RPL16B	P26785	198 aa	Known RBP	2.78	□□□□□ -1.96
YGR039W	YGR039W	PMT2	P31382	759 aa		2.78	□□□□□ -1.96
YGR039W	YGR039W	CSE1	P33307	960 aa		2.78	□□□□□ -1.96
YGR039W	YGR039W	YKL187C	P34231	750 aa		2.78	□□□□□ -1.96
YGR039W	YGR039W	MAL32	P38158	584 aa		2.78	□□□□□ -1.96
YGR039W	YGR039W	MDM31	P38880	579 aa		2.78	□□□□□ -1.96
YGR039W	YGR039W	PTI1	P39927	425 aa	Predicted RBP	2.78	□□□□□ -1.96
YGR039W	YGR039W	YER184C	P39961	794 aa		2.78	□□□□□ -1.96
YGR039W	YGR039W	HEM14	P40012	539 aa		2.78	□□□□□ -1.96
YGR039W	YGR039W	TAD2	P47058	250 aa		2.78	□□□□□ -1.96
YGR039W	YGR039W	RPC17	P47076	161 aa		2.78	□□□□□ -1.96
YGR039W	YGR039W	HOC1	P47124	396 aa		2.78	□□□□□ -1.96
YGR039W	YGR039W	YJR085C	P47131	105 aa	Known RBP	2.78	□□□□□ -1.96
YGR039W	YGR039W	SWC4	P53201	476 aa		2.78	□□□□□ -1.96
YGR039W	YGR039W	MAL12	P53341	584 aa		2.78	□□□□□ -1.96
YGR039W	YGR039W	MSO1	P53604	210 aa	Known RBP	2.78	□□□□□ -1.96
YGR039W	YGR039W	HCH1	P53834	153 aa		2.78	□□□□□ -1.96
YGR039W	YGR039W	NUP116	Q02630	1113 aa		2.78	□□□□□ -1.96
YGR039W	YGR039W	TAZ1	Q06510	381 aa		2.78	□□□□□ -1.96
YGR039W	YGR039W	YPR091C	Q06833	770 aa		2.78	□□□□□ -1.96
YGR039W	YGR039W	CSM4	Q08955	156 aa		2.78	□□□□□ -1.96
YGR039W	YGR039W	TAF10	Q12030	206 aa		2.78	□□□□□ -1.96
YGR039W	YGR039W	YGK3	Q12222	375 aa	Predicted RBP	2.78	□□□□□ -1.96
YGR039W	YGR039W	MCT1	Q12283	360 aa		2.78	□□□□□ -1.96
YGR039W	YGR039W	UTP23	Q12339	254 aa	Known RBP	2.78	□□□□□ -1.96
YGR039W	YGR039W	SNF8	Q12483	233 aa		2.78	□□□□□ -1.96
YGR039W	YGR039W	SEY1	Q99287	776 aa		2.78	□□□□□ -1.96
YGR039W	YGR039W	HIS1	P00498	297 aa	Known RBP	2.77	□□□□□ -1.97
YGR039W	YGR039W	HEM4	P06174	275 aa		2.77	□□□□□ -1.97
YGR039W	YGR039W	RPS18A	P0CX55	146 aa	Known RBP	2.77	□□□□□ -1.97
YGR039W	YGR039W	RPS18B	P0CX56	146 aa	Predicted RBP	2.77	□□□□□ -1.97
YGR039W	YGR039W	MRP1	P10662	321 aa	Known RBP	2.77	□□□□□ -1.97
YGR039W	YGR039W	NHP6B	P11633	99 aa	Known RBP	2.77	□□□□□ -1.97
YGR039W	YGR039W	MIR1	P23641	311 aa	Known RBP	2.77	□□□□□ -1.97
YGR039W	YGR039W	RPL24B	P24000	155 aa	Known RBP	2.77	□□□□□ -1.97
YGR039W	YGR039W	PPA2	P28239	310 aa		2.77	□□□□□ -1.97
YGR039W	YGR039W	RIB1	P38066	345 aa		2.77	□□□□□ -1.97
YGR039W	YGR039W	ECM8	P38246	354 aa		2.77	□□□□□ -1.97
YGR039W	YGR039W	RCK1	P38622	512 aa		2.77	□□□□□ -1.97
YGR039W	YGR039W	URA8	P38627	578 aa	Predicted RBP	2.77	□□□□□ -1.97
YGR039W	YGR039W	TDA11	P38854	504 aa		2.77	□□□□□ -1.97
YGR039W	YGR039W	CHL4	P38907	458 aa		2.77	□□□□□ -1.97
YGR039W	YGR039W	PRM5	P40476	318 aa		2.77	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms