RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W UIP4Q08926 304 aa6.09□□□□□ -1.43
NUP49YGL172W HER1Q12276 1246 aa6.09□□□□□ -1.43
NUP49YGL172W YPR071WQ12346 211 aa6.09□□□□□ -1.43
NUP49YGL172W YPL119C-AQ3E751 87 aa6.09□□□□□ -1.43
NUP49YGL172W EHD3P28817 500 aa6.08□□□□□ -1.44
NUP49YGL172W PRE2P30656 287 aaKnown RBP6.08□□□□□ -1.44
NUP49YGL172W RPC82P32349 654 aa6.08□□□□□ -1.44
NUP49YGL172W PRP21P32524 280 aaPredicted RBP6.08□□□□□ -1.44
NUP49YGL172W LHS1P36016 881 aa6.08□□□□□ -1.44
NUP49YGL172W EGD2P38879 174 aaKnown RBP6.08□□□□□ -1.44
NUP49YGL172W ISC1P40015 477 aaKnown RBP6.08□□□□□ -1.44
NUP49YGL172W SHO1P40073 367 aa6.08□□□□□ -1.44
NUP49YGL172W YIL169CP40442 995 aa6.08□□□□□ -1.44
NUP49YGL172W HNT2P49775 206 aa6.08□□□□□ -1.44
NUP49YGL172W EXG2P52911 562 aa6.08□□□□□ -1.44
NUP49YGL172W GRX5Q02784 150 aa6.08□□□□□ -1.44
NUP49YGL172W SRP1Q02821 542 aaKnown RBP6.08□□□□□ -1.44
NUP49YGL172W SNZ1Q03148 297 aa6.08□□□□□ -1.44
NUP49YGL172W SNO4Q04902 237 aa6.08□□□□□ -1.44
NUP49YGL172W SNT309Q06091 175 aaPredicted RBP6.08□□□□□ -1.44
NUP49YGL172W YLR345WQ06137 509 aa6.08□□□□□ -1.44
NUP49YGL172W HNT3Q08702 217 aa6.08□□□□□ -1.44
NUP49YGL172W RDL2Q08742 149 aaKnown RBP6.08□□□□□ -1.44
NUP49YGL172W HSP33Q08914 237 aaKnown RBP6.08□□□□□ -1.44
NUP49YGL172W HSP32Q08992 237 aa6.08□□□□□ -1.44
NUP49YGL172W MET32Q12041 191 aa6.08□□□□□ -1.44
NUP49YGL172W GAL1P04385 528 aa6.08□□□□□ -1.44
NUP49YGL172W DPM1P14020 267 aaKnown RBP6.08□□□□□ -1.44
NUP49YGL172W NUP1P20676 1076 aa6.08□□□□□ -1.44
NUP49YGL172W ATS1P31386 333 aa6.08□□□□□ -1.44
NUP49YGL172W HIS7P33734 552 aaKnown RBP6.08□□□□□ -1.44
NUP49YGL172W TIF3P34167 436 aaKnown RBP6.08□□□□□ -1.44
NUP49YGL172W MAE1P36013 669 aaKnown RBP6.08□□□□□ -1.44
NUP49YGL172W GPX1P36014 167 aa6.08□□□□□ -1.44
NUP49YGL172W YKL071WP36086 256 aa6.08□□□□□ -1.44
NUP49YGL172W RPP1P38786 293 aa6.08□□□□□ -1.44
NUP49YGL172W SSZ1P38788 538 aaKnown RBP6.08□□□□□ -1.44
NUP49YGL172W FET3P38993 636 aa6.08□□□□□ -1.44
NUP49YGL172W SIT1P39980 628 aa6.08□□□□□ -1.44
NUP49YGL172W SLS1P42900 643 aa6.08□□□□□ -1.44
NUP49YGL172W IDS2P46958 469 aa6.08□□□□□ -1.44
NUP49YGL172W NIT2P47016 307 aa6.08□□□□□ -1.44
NUP49YGL172W LYS5P50113 272 aa6.08□□□□□ -1.44
NUP49YGL172W YGL101WP53144 215 aa6.08□□□□□ -1.44
NUP49YGL172W YGR066CP53242 292 aa6.08□□□□□ -1.44
NUP49YGL172W ELP6Q04868 273 aa6.08□□□□□ -1.44
NUP49YGL172W IRC19Q07843 230 aa6.08□□□□□ -1.44
NUP49YGL172W COQ10Q08058 207 aa6.08□□□□□ -1.44
NUP49YGL172W RLM1Q12224 676 aa6.08□□□□□ -1.44
NUP49YGL172W YDL177CQ12257 170 aa6.08□□□□□ -1.44
NUP49YGL172W PDX1P16451 410 aa6.07□□□□□ -1.44
NUP49YGL172W RPB8P20436 146 aa6.07□□□□□ -1.44
NUP49YGL172W AIM17P23180 465 aaKnown RBP6.07□□□□□ -1.44
NUP49YGL172W URE2P23202 354 aaKnown RBP6.07□□□□□ -1.44
NUP49YGL172W PCL2P25693 308 aa6.07□□□□□ -1.44
NUP49YGL172W OAC1P32332 324 aa6.07□□□□□ -1.44
NUP49YGL172W TRS65P32893 560 aa6.07□□□□□ -1.44
NUP49YGL172W NIC96P34077 839 aa6.07□□□□□ -1.44
NUP49YGL172W MRPL16P38064 232 aa6.07□□□□□ -1.44
NUP49YGL172W ZRG8P40021 1076 aa6.07□□□□□ -1.44
NUP49YGL172W MSS2P40990 351 aa6.07□□□□□ -1.44
NUP49YGL172W STB1P42845 420 aa6.07□□□□□ -1.44
NUP49YGL172W MDE1P47095 244 aa6.07□□□□□ -1.44
NUP49YGL172W BPL1P48445 690 aaPredicted RBP6.07□□□□□ -1.44
NUP49YGL172W SLD3P53135 668 aa6.07□□□□□ -1.44
NUP49YGL172W FDC1Q03034 503 aa6.07□□□□□ -1.44
NUP49YGL172W YPL039WQ03080 316 aa6.07□□□□□ -1.44
NUP49YGL172W TLG1Q03322 224 aa6.07□□□□□ -1.44
NUP49YGL172W UTP21Q06078 939 aaPredicted RBP6.07□□□□□ -1.44
NUP49YGL172W YDL218WQ07629 317 aa6.07□□□□□ -1.44
NUP49YGL172W HRT1Q08273 121 aa6.07□□□□□ -1.44
NUP49YGL172W SIA1Q12212 622 aa6.07□□□□□ -1.44
NUP49YGL172W PST2Q12335 198 aaKnown RBP6.07□□□□□ -1.44
NUP49YGL172W Q0144Q9ZZW2 109 aa6.07□□□□□ -1.44
NUP49YGL172W TY1A-LR4P0C2I8 440 aaKnown RBP6.06□□□□□ -1.44
NUP49YGL172W TY1A-DR6P0CX70 440 aa6.06□□□□□ -1.44
NUP49YGL172W TY1A-ER1P0CX71 440 aa6.06□□□□□ -1.44
NUP49YGL172W TY1A-LR2P0CX72 440 aa6.06□□□□□ -1.44
NUP49YGL172W TY1A-PLP0CX73 440 aa6.06□□□□□ -1.44
NUP49YGL172W TY1A-JR1P0CX74 440 aa6.06□□□□□ -1.44
NUP49YGL172W TY1A-LR3P0CX75 440 aa6.06□□□□□ -1.44
NUP49YGL172W TY1A-ML2P0CX76 440 aa6.06□□□□□ -1.44
NUP49YGL172W SCO1P23833 295 aa6.06□□□□□ -1.44
NUP49YGL172W ERG9P29704 444 aa6.06□□□□□ -1.44
NUP49YGL172W MDH3P32419 343 aaKnown RBP RIP-Chip data6.06□□□□□ -1.44not detected
NUP49YGL172W YEF1P32622 495 aa6.06□□□□□ -1.44
NUP49YGL172W ARN2P38724 620 aa6.06□□□□□ -1.44
NUP49YGL172W CHL4P38907 458 aa6.06□□□□□ -1.44
NUP49YGL172W SOP4P39543 234 aaPredicted RBP6.06□□□□□ -1.44
NUP49YGL172W NAS2P40555 220 aa6.06□□□□□ -1.44
NUP49YGL172W RET2P43621 546 aa6.06□□□□□ -1.44
NUP49YGL172W PRY1P47032 299 aa6.06□□□□□ -1.44
NUP49YGL172W YJR098CP47139 656 aa6.06□□□□□ -1.44
NUP49YGL172W BRR6P53062 197 aa6.06□□□□□ -1.44
NUP49YGL172W YGR126WP53274 230 aa6.06□□□□□ -1.44
NUP49YGL172W OGG1P53397 376 aaPredicted RBP6.06□□□□□ -1.44
NUP49YGL172W MPP6P53725 186 aaPredicted RBP6.06□□□□□ -1.44
NUP49YGL172W OST6Q03723 332 aa6.06□□□□□ -1.44
NUP49YGL172W RSA3Q05942 220 aaKnown RBP6.06□□□□□ -1.44
NUP49YGL172W TY1A-GR1Q12085 440 aa6.06□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 89.2 ms