RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W AEP3Q12089 606 aa4.83□□□□□ -1.64
UBP9YER098W YCL001W-BQ96VH2 84 aa4.83□□□□□ -1.64
UBP9YER098W AI5_BETAQ9ZZX0 354 aa4.83□□□□□ -1.64
UBP9YER098W REP2P03872 296 aa4.82□□□□□ -1.64
UBP9YER098W CHO1P08456 276 aa4.82□□□□□ -1.64
UBP9YER098W YFR010W-AP0C5N0 62 aa4.82□□□□□ -1.64
UBP9YER098W YUR1P26725 428 aa4.82□□□□□ -1.64
UBP9YER098W SPO23P33757 523 aa4.82□□□□□ -1.64
UBP9YER098W MRPL37P36532 105 aa4.82□□□□□ -1.64
UBP9YER098W YMC2P38087 329 aa4.82□□□□□ -1.64
UBP9YER098W SEN34P39707 275 aa4.82□□□□□ -1.64
UBP9YER098W NSE4P43124 402 aa4.82□□□□□ -1.64
UBP9YER098W AZR1P50080 613 aa4.82□□□□□ -1.64
UBP9YER098W PMT5P52867 743 aa4.82□□□□□ -1.64
UBP9YER098W NQM1P53228 333 aaPredicted RBP4.82□□□□□ -1.64
UBP9YER098W YGR067CP53243 804 aa4.82□□□□□ -1.64
UBP9YER098W YPR003CP53394 754 aa4.82□□□□□ -1.64
UBP9YER098W YMR130WQ04223 302 aa4.82□□□□□ -1.64
UBP9YER098W PHO92Q06390 306 aa4.82□□□□□ -1.64
UBP9YER098W CYK3Q07533 885 aa4.82□□□□□ -1.64
UBP9YER098W ZEO1Q08245 113 aa4.82□□□□□ -1.64
UBP9YER098W RRG7Q08774 242 aaPredicted RBP4.82□□□□□ -1.64
UBP9YER098W YPL247CQ12523 523 aa4.82□□□□□ -1.64
UBP9YER098W TFB5Q3E7C1 72 aaPredicted RBP4.82□□□□□ -1.64
UBP9YER098W SUS1Q6WNK7 96 aa4.82□□□□□ -1.64
UBP9YER098W PRP2P20095 876 aaPredicted RBP4.81□□□□□ -1.64
UBP9YER098W RPS1BP23248 255 aaKnown RBP4.81□□□□□ -1.64
UBP9YER098W SNC1P31109 117 aa4.81□□□□□ -1.64
UBP9YER098W LDS1P31379 325 aa4.81□□□□□ -1.64
UBP9YER098W YSC83P32792 385 aa4.81□□□□□ -1.64
UBP9YER098W RPS1AP33442 255 aaKnown RBP4.81□□□□□ -1.64
UBP9YER098W DBP8P38719 431 aa4.81□□□□□ -1.64
UBP9YER098W FET3P38993 636 aa4.81□□□□□ -1.64
UBP9YER098W YIL089WP40500 205 aa4.81□□□□□ -1.64
UBP9YER098W GNA1P43577 159 aaPredicted RBP4.81□□□□□ -1.64
UBP9YER098W SEH1P53011 349 aaKnown RBP4.81□□□□□ -1.64
UBP9YER098W YGL117WP53133 265 aa4.81□□□□□ -1.64
UBP9YER098W MNT4P53745 580 aa4.81□□□□□ -1.64
UBP9YER098W ALG11P53954 548 aaKnown RBP4.81□□□□□ -1.64
UBP9YER098W PRP38Q00723 242 aaPredicted RBP4.81□□□□□ -1.64
UBP9YER098W TOF2Q02208 771 aa4.81□□□□□ -1.64
UBP9YER098W EGD1Q02642 157 aaKnown RBP4.81□□□□□ -1.64
UBP9YER098W PRM15Q03262 622 aa4.81□□□□□ -1.64
UBP9YER098W GPN3Q06543 272 aa4.81□□□□□ -1.64
UBP9YER098W UBX3Q12229 455 aa4.81□□□□□ -1.64
UBP9YER098W RKM5Q12367 367 aa4.81□□□□□ -1.64
UBP9YER098W RIB3Q99258 208 aa4.81□□□□□ -1.64
UBP9YER098W CHS1P08004 1131 aa4.81□□□□□ -1.64
UBP9YER098W BEM1P29366 551 aa4.81□□□□□ -1.64
UBP9YER098W AFG1P32317 509 aa4.81□□□□□ -1.64
UBP9YER098W ECM25P32525 599 aa4.81□□□□□ -1.64
UBP9YER098W MRPL6P32904 214 aa4.81□□□□□ -1.64
UBP9YER098W GEP4P38812 185 aa4.81□□□□□ -1.64
UBP9YER098W RPS10BP46784 105 aaKnown RBP4.81□□□□□ -1.64
UBP9YER098W ASG7P46993 209 aa4.81□□□□□ -1.64
UBP9YER098W YJL043WP47053 257 aa4.81□□□□□ -1.64
UBP9YER098W AIM24P47127 394 aa4.81□□□□□ -1.64
UBP9YER098W ERG26P53199 349 aaKnown RBP4.81□□□□□ -1.64
UBP9YER098W TIM13P53299 105 aa4.81□□□□□ -1.64
UBP9YER098W LAP3Q01532 483 aaKnown RBP RIP-Chip data4.81□□□□□ -1.64not detected
UBP9YER098W YMR206WQ03695 313 aa4.81□□□□□ -1.64
UBP9YER098W AIM36Q03798 255 aa4.81□□□□□ -1.64
UBP9YER098W HPT1Q04178 221 aaKnown RBP4.81□□□□□ -1.64
UBP9YER098W CDC123Q05791 360 aa4.81□□□□□ -1.64
UBP9YER098W YLR283WQ05867 314 aa4.81□□□□□ -1.64
UBP9YER098W YLL056CQ12177 298 aa4.81□□□□□ -1.64
UBP9YER098W GLT1Q12680 2145 aaKnown RBP4.81□□□□□ -1.64
UBP9YER098W PCC1Q3E833 88 aa4.81□□□□□ -1.64
UBP9YER098W HSP26P15992 214 aaKnown RBP RIP-Chip data4.8□□□□□ -1.64not detected
UBP9YER098W CDC23P16522 626 aa4.8□□□□□ -1.64
UBP9YER098W BUB2P26448 306 aaPredicted RBP4.8□□□□□ -1.64
UBP9YER098W VMA5P31412 392 aaKnown RBP4.8□□□□□ -1.64
UBP9YER098W MSN2P33748 704 aa4.8□□□□□ -1.64
UBP9YER098W NSG1P38837 291 aa4.8□□□□□ -1.64
UBP9YER098W YHR182WP38870 785 aa4.8□□□□□ -1.64
UBP9YER098W RPL10P41805 221 aaKnown RBP4.8□□□□□ -1.64
UBP9YER098W AVT1P47082 602 aa4.8□□□□□ -1.64
UBP9YER098W PRP24P49960 444 aaKnown RBP4.8□□□□□ -1.64
UBP9YER098W LSM7P53905 115 aaKnown RBP4.8□□□□□ -1.64
UBP9YER098W RSM23Q01163 450 aa4.8□□□□□ -1.64
UBP9YER098W GAS3Q03655 524 aa4.8□□□□□ -1.64
UBP9YER098W ATG38Q05789 226 aaKnown RBP4.8□□□□□ -1.64
UBP9YER098W YDL199CQ12407 687 aa4.8□□□□□ -1.64
UBP9YER098W HKR1P41809 1802 aa4.8□□□□□ -1.64
UBP9YER098W SPS4P09937 338 aa4.8□□□□□ -1.64
UBP9YER098W MER1P16523 270 aa4.8□□□□□ -1.64
UBP9YER098W BUD5P25300 642 aaPredicted RBP4.8□□□□□ -1.64
UBP9YER098W SRB6P32570 121 aa4.8□□□□□ -1.64
UBP9YER098W PDC2P32896 925 aa4.8□□□□□ -1.64
UBP9YER098W HPA3P39979 161 aa4.8□□□□□ -1.64
UBP9YER098W AGE2P40529 298 aa4.8□□□□□ -1.64
UBP9YER098W LSB1P53281 241 aa4.8□□□□□ -1.64
UBP9YER098W RSM27P53305 110 aa4.8□□□□□ -1.64
UBP9YER098W YMR178WQ03219 274 aaKnown RBP4.8□□□□□ -1.64
UBP9YER098W VAM3Q12241 283 aa4.8□□□□□ -1.64
UBP9YER098W MHF2Q3E829 80 aa4.8□□□□□ -1.64
UBP9YER098W MTR10Q99189 972 aa4.8□□□□□ -1.64
UBP9YER098W YLR422WQ06409 1932 aa4.8□□□□□ -1.64
UBP9YER098W SPS2P08459 502 aa4.79□□□□□ -1.64
UBP9YER098W MAS2P11914 482 aa4.79□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms