RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	RSA1	Q08932	381 aa		3.78	□□□□□ -1.8
UBC8	YEL012W	ATX2	Q12067	313 aa		3.78	□□□□□ -1.8
UBC8	YEL012W	REX3	Q12090	404 aa		3.78	□□□□□ -1.8
UBC8	YEL012W	PAR32	Q12515	295 aa	Known RBP	3.78	□□□□□ -1.8
UBC8	YEL012W	YCL012C	Q8J0M4	134 aa		3.78	□□□□□ -1.8
UBC8	YEL012W	YOR032W-A	Q8TGS1	66 aa		3.78	□□□□□ -1.8
UBC8	YEL012W	RPL42A	P0CX27	106 aa	Known RBP	3.77	□□□□□ -1.81
UBC8	YEL012W	RPL42B	P0CX28	106 aa	Known RBP	3.77	□□□□□ -1.81
UBC8	YEL012W	PTH1	P38876	190 aa	Known RBP	3.77	□□□□□ -1.81
UBC8	YEL012W	GAT2	P40209	560 aa		3.77	□□□□□ -1.81
UBC8	YEL012W	GCD10	P41814	478 aa		3.77	□□□□□ -1.81
UBC8	YEL012W	HXT14	P42833	540 aa		3.77	□□□□□ -1.81
UBC8	YEL012W	PGU1	P47180	361 aa		3.77	□□□□□ -1.81
UBC8	YEL012W	YGR126W	P53274	230 aa		3.77	□□□□□ -1.81
UBC8	YEL012W	SEC10	Q06245	871 aa		3.77	□□□□□ -1.81
UBC8	YEL012W	YLL007C	Q07799	665 aa		3.77	□□□□□ -1.81
UBC8	YEL012W	STE7	P06784	515 aa		3.76	□□□□□ -1.81
UBC8	YEL012W	COS2	P0CX12	379 aa		3.76	□□□□□ -1.81
UBC8	YEL012W	COS3	P0CX13	379 aa		3.76	□□□□□ -1.81
UBC8	YEL012W	MCK1	P21965	375 aa	Known RBP	3.76	□□□□□ -1.81
UBC8	YEL012W	SLM5	P25345	492 aa	Known RBP	3.76	□□□□□ -1.81
UBC8	YEL012W	VMA8	P32610	256 aa	Known RBP	3.76	□□□□□ -1.81
UBC8	YEL012W	YME1	P32795	747 aa		3.76	□□□□□ -1.81
UBC8	YEL012W	RPS1A	P33442	255 aa	Known RBP	3.76	□□□□□ -1.81
UBC8	YEL012W	MSN2	P33748	704 aa		3.76	□□□□□ -1.81
UBC8	YEL012W	DOA1	P36037	715 aa		3.76	□□□□□ -1.81
UBC8	YEL012W	RSM22	P36056	628 aa		3.76	□□□□□ -1.81
UBC8	YEL012W	LAG1	P38703	411 aa		3.76	□□□□□ -1.81
UBC8	YEL012W	TRR2	P38816	342 aa		3.76	□□□□□ -1.81
UBC8	YEL012W	YHR177W	P38867	453 aa		3.76	□□□□□ -1.81
UBC8	YEL012W	AIM2	P39721	246 aa		3.76	□□□□□ -1.81
UBC8	YEL012W	AST2	P39945	430 aa	Known RBP	3.76	□□□□□ -1.81
UBC8	YEL012W	YNL208W	P40159	199 aa	Known RBP	3.76	□□□□□ -1.81
UBC8	YEL012W	COS4	P43542	379 aa		3.76	□□□□□ -1.81
UBC8	YEL012W	FMP32	P43557	207 aa		3.76	□□□□□ -1.81
UBC8	YEL012W	SMM1	P53720	384 aa	Known RBP	3.76	□□□□□ -1.81
UBC8	YEL012W	CTL1	Q03220	320 aa	Known RBP	3.76	□□□□□ -1.81
UBC8	YEL012W	YMR111C	Q04461	462 aa	Predicted RBP	3.76	□□□□□ -1.81
UBC8	YEL012W	GLO2	Q05584	274 aa		3.76	□□□□□ -1.81
UBC8	YEL012W	RRG7	Q08774	242 aa	Predicted RBP	3.76	□□□□□ -1.81
UBC8	YEL012W	RDR1	Q08904	546 aa		3.76	□□□□□ -1.81
UBC8	YEL012W	SLF1	Q12034	447 aa	Known RBP	3.76	□□□□□ -1.81
UBC8	YEL012W	YDL211C	Q12121	372 aa		3.76	□□□□□ -1.81
UBC8	YEL012W	MTR10	Q99189	972 aa		3.76	□□□□□ -1.81
UBC8	YEL012W	RAD52	P06778	471 aa	Known RBP	3.75	□□□□□ -1.81
UBC8	YEL012W	RPL31B	P0C2H9	113 aa	Known RBP	3.75	□□□□□ -1.81
UBC8	YEL012W	YFL068W	P0CX99	160 aa		3.75	□□□□□ -1.81
UBC8	YEL012W	YLL066W-A	P0CY00	160 aa		3.75	□□□□□ -1.81
UBC8	YEL012W	YLL067W-A	P0CY01	160 aa		3.75	□□□□□ -1.81
UBC8	YEL012W	ARF1	P11076	181 aa	Known RBP	3.75	□□□□□ -1.81
UBC8	YEL012W	RPI1	P23250	407 aa	Known RBP	3.75	□□□□□ -1.81
UBC8	YEL012W	YIM1	P28625	365 aa		3.75	□□□□□ -1.81
UBC8	YEL012W	COX13	P32799	129 aa		3.75	□□□□□ -1.81
UBC8	YEL012W	VPS21	P36017	210 aa	Known RBP	3.75	□□□□□ -1.81
UBC8	YEL012W	ROT2	P38138	954 aa		3.75	□□□□□ -1.81
UBC8	YEL012W	PCL6	P40038	420 aa		3.75	□□□□□ -1.81
UBC8	YEL012W	YIL001W	P40560	513 aa		3.75	□□□□□ -1.81
UBC8	YEL012W	RTS2	P40962	232 aa		3.75	□□□□□ -1.81
UBC8	YEL012W	ATG27	P46989	271 aa		3.75	□□□□□ -1.81
UBC8	YEL012W	YNR068C	P53754	272 aa		3.75	□□□□□ -1.81
UBC8	YEL012W	RHO4	Q00246	291 aa		3.75	□□□□□ -1.81
UBC8	YEL012W	YML122C	Q03207	126 aa		3.75	□□□□□ -1.81
UBC8	YEL012W	INP1	Q03694	420 aa		3.75	□□□□□ -1.81
UBC8	YEL012W	ESA1	Q08649	445 aa		3.75	□□□□□ -1.81
UBC8	YEL012W	YLR053C	Q12026	108 aa		3.75	□□□□□ -1.81
UBC8	YEL012W	BSC1	Q12140	328 aa		3.75	□□□□□ -1.81
UBC8	YEL012W	SKS1	Q12505	502 aa		3.75	□□□□□ -1.81
UBC8	YEL012W	FOL3	Q12676	427 aa	Predicted RBP	3.75	□□□□□ -1.81
UBC8	YEL012W	Q0297	Q9ZZV8	51 aa		3.75	□□□□□ -1.81
UBC8	YEL012W	BAR1	P12630	587 aa		3.74	□□□□□ -1.81
UBC8	YEL012W	CLB3	P24870	427 aa		3.74	□□□□□ -1.81
UBC8	YEL012W	SPO23	P33757	523 aa		3.74	□□□□□ -1.81
UBC8	YEL012W	VPS51	P36116	164 aa		3.74	□□□□□ -1.81
UBC8	YEL012W	RPC37	P36121	282 aa		3.74	□□□□□ -1.81
UBC8	YEL012W	SPC34	P36131	295 aa		3.74	□□□□□ -1.81
UBC8	YEL012W	LAS1	P36146	502 aa	Predicted RBP	3.74	□□□□□ -1.81
UBC8	YEL012W	YPK3	P38070	525 aa		3.74	□□□□□ -1.81
UBC8	YEL012W	TCM62	P38228	572 aa	Known RBP	3.74	□□□□□ -1.81
UBC8	YEL012W	YGP1	P38616	354 aa	Known RBP	3.74	□□□□□ -1.81
UBC8	YEL012W	KEL2	P50090	882 aa		3.74	□□□□□ -1.81
UBC8	YEL012W	DUG3	P53871	357 aa		3.74	□□□□□ -1.81
UBC8	YEL012W	YNL181W	P53878	407 aa		3.74	□□□□□ -1.81
UBC8	YEL012W	YLR460C	P54007	376 aa		3.74	□□□□□ -1.81
UBC8	YEL012W	SHR3	Q02774	210 aa		3.74	□□□□□ -1.81
UBC8	YEL012W	PAL1	Q05518	499 aa	Known RBP	3.74	□□□□□ -1.81
UBC8	YEL012W	YLR446W	Q06204	433 aa		3.74	□□□□□ -1.81
UBC8	YEL012W	YPR091C	Q06833	770 aa		3.74	□□□□□ -1.81
UBC8	YEL012W	TMC1	Q08422	150 aa	Predicted RBP	3.74	□□□□□ -1.81
UBC8	YEL012W	RIO1	Q12196	484 aa	Known RBP	3.74	□□□□□ -1.81
UBC8	YEL012W	RRP36	Q12481	300 aa	Predicted RBP	3.74	□□□□□ -1.81
UBC8	YEL012W	PSF1	Q12488	208 aa		3.74	□□□□□ -1.81
UBC8	YEL012W	CBP2	P03874	630 aa	Predicted RBP	3.73	□□□□□ -1.81
UBC8	YEL012W	RHO2	P06781	192 aa		3.73	□□□□□ -1.81
UBC8	YEL012W	ERD1	P16151	362 aa		3.73	□□□□□ -1.81
UBC8	YEL012W	BUB2	P26448	306 aa	Predicted RBP	3.73	□□□□□ -1.81
UBC8	YEL012W	SNC1	P31109	117 aa		3.73	□□□□□ -1.81
UBC8	YEL012W	SEC17	P32602	292 aa		3.73	□□□□□ -1.81
UBC8	YEL012W	SSO1	P32867	290 aa		3.73	□□□□□ -1.81
UBC8	YEL012W	TPO5	P36029	618 aa		3.73	□□□□□ -1.81
UBC8	YEL012W	PHD1	P36093	366 aa		3.73	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 61.5 ms