RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	YER010C	P40011	234 aa		6.54	□□□□□ -1.36
SKP1	YDR328C	PCL6	P40038	420 aa		6.54	□□□□□ -1.36
SKP1	YDR328C	ECL1	P48235	211 aa		6.54	□□□□□ -1.36
SKP1	YDR328C	SCW11	P53189	542 aa		6.54	□□□□□ -1.36
SKP1	YDR328C	MAL12	P53341	584 aa		6.54	□□□□□ -1.36
SKP1	YDR328C	HOL1	P53389	586 aa		6.54	□□□□□ -1.36
SKP1	YDR328C	SRL4	Q03085	281 aa		6.54	□□□□□ -1.36
SKP1	YDR328C	MAK3	Q03503	176 aa		6.54	□□□□□ -1.36
SKP1	YDR328C	GRX3	Q03835	250 aa		6.54	□□□□□ -1.36
SKP1	YDR328C	YLR346C	Q06139	101 aa		6.54	□□□□□ -1.36
SKP1	YDR328C	TAZ1	Q06510	381 aa		6.54	□□□□□ -1.36
SKP1	YDR328C	YOL024W	Q08172	172 aa		6.54	□□□□□ -1.36
SKP1	YDR328C	HRT1	Q08273	121 aa		6.54	□□□□□ -1.36
SKP1	YDR328C	GRE1	Q08969	168 aa		6.54	□□□□□ -1.36
SKP1	YDR328C	MDM32	Q12171	622 aa		6.54	□□□□□ -1.36
SKP1	YDR328C	SWM1	Q12379	170 aa		6.54	□□□□□ -1.36
SKP1	YDR328C	TEL1	P38110	2787 aa		6.53	□□□□□ -1.36
SKP1	YDR328C	PEP4	P07267	405 aa	Known RBP	6.53	□□□□□ -1.36
SKP1	YDR328C	YHR214C-D	P0CX93	97 aa		6.53	□□□□□ -1.36
SKP1	YDR328C	NVJ1	P38881	321 aa		6.53	□□□□□ -1.36
SKP1	YDR328C	MLH1	P38920	769 aa		6.53	□□□□□ -1.36
SKP1	YDR328C	YGR054W	P53235	642 aa	Known RBP	6.53	□□□□□ -1.36
SKP1	YDR328C	OGG1	P53397	376 aa	Predicted RBP	6.53	□□□□□ -1.36
SKP1	YDR328C	SCS7	Q03529	384 aa		6.53	□□□□□ -1.36
SKP1	YDR328C	YMR315W	Q04869	349 aa	Known RBP	6.53	□□□□□ -1.36
SKP1	YDR328C	COX20	Q04935	205 aa		6.53	□□□□□ -1.36
SKP1	YDR328C	IRC19	Q07843	230 aa		6.53	□□□□□ -1.36
SKP1	YDR328C	FRE5	Q08908	694 aa		6.53	□□□□□ -1.36
SKP1	YDR328C	RKM1	Q08961	583 aa	Predicted RBP	6.53	□□□□□ -1.36
SKP1	YDR328C	GAS1	P22146	559 aa	Known RBP	6.52	□□□□□ -1.37
SKP1	YDR328C	ARO7	P32178	256 aa		6.52	□□□□□ -1.37
SKP1	YDR328C	NUD1	P32336	851 aa		6.52	□□□□□ -1.37
SKP1	YDR328C	MTC2	P34246	357 aa		6.52	□□□□□ -1.37
SKP1	YDR328C	VBA2	P38358	474 aa	Known RBP	6.52	□□□□□ -1.37
SKP1	YDR328C	PFS2	P42841	465 aa	Known RBP	6.52	□□□□□ -1.37
SKP1	YDR328C	ECO1	P43605	281 aa		6.52	□□□□□ -1.37
SKP1	YDR328C	SAM37	P50110	327 aa		6.52	□□□□□ -1.37
SKP1	YDR328C	ATG4	P53867	494 aa		6.52	□□□□□ -1.37
SKP1	YDR328C	NOG1	Q02892	647 aa	Known RBP	6.52	□□□□□ -1.37
SKP1	YDR328C	RCF1	Q03713	159 aa		6.52	□□□□□ -1.37
SKP1	YDR328C	MDM36	Q06820	579 aa		6.52	□□□□□ -1.37
SKP1	YDR328C	YDL114W	Q07530	308 aa		6.52	□□□□□ -1.37
SKP1	YDR328C	YOR238W	Q08634	303 aa		6.52	□□□□□ -1.37
SKP1	YDR328C	RDL2	Q08742	149 aa	Known RBP	6.52	□□□□□ -1.37
SKP1	YDR328C	YDL176W	Q12027	708 aa		6.52	□□□□□ -1.37
SKP1	YDR328C	REP1	P03871	373 aa		6.51	□□□□□ -1.37
SKP1	YDR328C	GIT1	P25346	518 aa		6.51	□□□□□ -1.37
SKP1	YDR328C	FUN19	P28003	413 aa	Predicted RBP	6.51	□□□□□ -1.37
SKP1	YDR328C	DTR1	P38125	572 aa		6.51	□□□□□ -1.37
SKP1	YDR328C	CHK1	P38147	527 aa		6.51	□□□□□ -1.37
SKP1	YDR328C	YER184C	P39961	794 aa		6.51	□□□□□ -1.37
SKP1	YDR328C	JLP2	P40206	208 aa		6.51	□□□□□ -1.37
SKP1	YDR328C	YIL165C	P40446	119 aa		6.51	□□□□□ -1.37
SKP1	YDR328C	SEC24	P40482	926 aa	Known RBP	6.51	□□□□□ -1.37
SKP1	YDR328C	NAS2	P40555	220 aa		6.51	□□□□□ -1.37
SKP1	YDR328C	YJL218W	P40892	196 aa	Known RBP	6.51	□□□□□ -1.37
SKP1	YDR328C	REE1	P40893	198 aa		6.51	□□□□□ -1.37
SKP1	YDR328C	SFH5	P47008	294 aa		6.51	□□□□□ -1.37
SKP1	YDR328C	YAE1	P47118	141 aa	Predicted RBP	6.51	□□□□□ -1.37
SKP1	YDR328C	YGR126W	P53274	230 aa		6.51	□□□□□ -1.37
SKP1	YDR328C	PBP1	P53297	722 aa	Known RBP	6.51	□□□□□ -1.37
SKP1	YDR328C	YPL039W	Q03080	316 aa		6.51	□□□□□ -1.37
SKP1	YDR328C	MIX14	Q04341	121 aa		6.51	□□□□□ -1.37
SKP1	YDR328C	MRPL51	Q06090	140 aa	Predicted RBP	6.51	□□□□□ -1.37
SKP1	YDR328C	RRP9	Q06506	573 aa	Known RBP	6.51	□□□□□ -1.37
SKP1	YDR328C	YPR147C	Q06522	304 aa	Known RBP	6.51	□□□□□ -1.37
SKP1	YDR328C	IPK1	Q06667	281 aa		6.51	□□□□□ -1.37
SKP1	YDR328C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	6.51	□□□□□ -1.37	not detected
SKP1	YDR328C	YOL114C	Q12322	202 aa		6.51	□□□□□ -1.37
SKP1	YDR328C	IES3	Q12345	250 aa		6.51	□□□□□ -1.37
SKP1	YDR328C	MTR10	Q99189	972 aa		6.51	□□□□□ -1.37
SKP1	YDR328C	TOR1	P35169	2470 aa		6.5	□□□□□ -1.37
SKP1	YDR328C	YGL041W-A	P0C5N3	154 aa		6.5	□□□□□ -1.37
SKP1	YDR328C	CTA1	P15202	515 aa		6.5	□□□□□ -1.37
SKP1	YDR328C	PRE7	P23724	241 aa	Known RBP	6.5	□□□□□ -1.37
SKP1	YDR328C	RPL24B	P24000	155 aa	Known RBP	6.5	□□□□□ -1.37
SKP1	YDR328C	CLB2	P24869	491 aa		6.5	□□□□□ -1.37
SKP1	YDR328C	NFS1	P25374	497 aa		6.5	□□□□□ -1.37
SKP1	YDR328C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	6.5	□□□□□ -1.37	not detected
SKP1	YDR328C	GPX2	P38143	162 aa		6.5	□□□□□ -1.37
SKP1	YDR328C	AMN1	P38285	549 aa	Predicted RBP	6.5	□□□□□ -1.37
SKP1	YDR328C	PHO90	P39535	881 aa		6.5	□□□□□ -1.37
SKP1	YDR328C	FMC1	P40491	155 aa		6.5	□□□□□ -1.37
SKP1	YDR328C	PPT1	P53043	513 aa		6.5	□□□□□ -1.37
SKP1	YDR328C	BRR6	P53062	197 aa		6.5	□□□□□ -1.37
SKP1	YDR328C	MKC7	P53379	596 aa		6.5	□□□□□ -1.37
SKP1	YDR328C	PDR16	P53860	351 aa	Known RBP	6.5	□□□□□ -1.37
SKP1	YDR328C	APM1	Q00776	475 aa	Predicted RBP	6.5	□□□□□ -1.37
SKP1	YDR328C	FDC1	Q03034	503 aa		6.5	□□□□□ -1.37
SKP1	YDR328C	SDC1	Q03323	175 aa		6.5	□□□□□ -1.37
SKP1	YDR328C	MGR3	Q04472	501 aa		6.5	□□□□□ -1.37
SKP1	YDR328C	VBA4	Q04602	768 aa	Known RBP	6.5	□□□□□ -1.37
SKP1	YDR328C	YPR109W	Q06104	294 aa		6.5	□□□□□ -1.37
SKP1	YDR328C	ACF2	Q12168	779 aa		6.5	□□□□□ -1.37
SKP1	YDR328C	FLO9	P39712	1322 aa		6.5	□□□□□ -1.37
SKP1	YDR328C	YAL064W-B	O13512	126 aa		6.49	□□□□□ -1.37
SKP1	YDR328C	OPI3	P05375	206 aa		6.49	□□□□□ -1.37
SKP1	YDR328C	KIN28	P06242	306 aa		6.49	□□□□□ -1.37
SKP1	YDR328C	HMG1	P12683	1054 aa		6.49	□□□□□ -1.37
SKP1	YDR328C	ATS1	P31386	333 aa		6.49	□□□□□ -1.37

Retrieved 100 of 5,963 RNA–protein pairs in 51.9 ms