RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	ARO8	P53090	500 aa	Known RBP	4.31	□□□□□ -1.72
SUP35	YDR172W	MRPL13	Q02204	264 aa		4.31	□□□□□ -1.72
SUP35	YDR172W	PFA5	Q03289	374 aa		4.31	□□□□□ -1.72
SUP35	YDR172W	MSS11	Q03825	758 aa		4.31	□□□□□ -1.72
SUP35	YDR172W	STP3	Q05937	343 aa		4.31	□□□□□ -1.72
SUP35	YDR172W	BNA5	Q05979	453 aa		4.31	□□□□□ -1.72
SUP35	YDR172W	SUS1	Q6WNK7	96 aa		4.31	□□□□□ -1.72
SUP35	YDR172W	KIN28	P06242	306 aa		4.3	□□□□□ -1.72
SUP35	YDR172W	GRX2	P17695	143 aa	Known RBP	4.3	□□□□□ -1.72
SUP35	YDR172W	MXR2	P25566	168 aa		4.3	□□□□□ -1.72
SUP35	YDR172W	ECM15	P35195	104 aa		4.3	□□□□□ -1.72
SUP35	YDR172W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.3	□□□□□ -1.72	not detected
SUP35	YDR172W	PRP39	P39682	629 aa	Known RBP	4.3	□□□□□ -1.72
SUP35	YDR172W	FET5	P43561	622 aa		4.3	□□□□□ -1.72
SUP35	YDR172W	SPT20	P50875	604 aa		4.3	□□□□□ -1.72
SUP35	YDR172W	RRN9	P53437	365 aa		4.3	□□□□□ -1.72
SUP35	YDR172W	YMR252C	Q04814	134 aa		4.3	□□□□□ -1.72
SUP35	YDR172W	MFB1	Q04922	465 aa		4.3	□□□□□ -1.72
SUP35	YDR172W	RRP9	Q06506	573 aa	Known RBP	4.3	□□□□□ -1.72
SUP35	YDR172W	YPR196W	Q06595	470 aa		4.3	□□□□□ -1.72
SUP35	YDR172W	NOP12	Q08208	459 aa	Known RBP	4.3	□□□□□ -1.72
SUP35	YDR172W	YOR289W	Q12012	251 aa	Predicted RBP	4.3	□□□□□ -1.72
SUP35	YDR172W	YGR161W-C	Q3E744	92 aa		4.3	□□□□□ -1.72
SUP35	YDR172W	RPS18A	P0CX55	146 aa	Known RBP	4.3	□□□□□ -1.72
SUP35	YDR172W	RPS18B	P0CX56	146 aa	Predicted RBP	4.3	□□□□□ -1.72
SUP35	YDR172W	YCL002C	P25565	263 aa		4.3	□□□□□ -1.72
SUP35	YDR172W	HSP30	P25619	332 aa		4.3	□□□□□ -1.72
SUP35	YDR172W	RNP1	P32385	249 aa		4.3	□□□□□ -1.72
SUP35	YDR172W	MDL1	P33310	695 aa		4.3	□□□□□ -1.72
SUP35	YDR172W	CLG1	P35190	452 aa		4.3	□□□□□ -1.72
SUP35	YDR172W	TRR2	P38816	342 aa		4.3	□□□□□ -1.72
SUP35	YDR172W	UTP25	P40498	721 aa	Known RBP	4.3	□□□□□ -1.72
SUP35	YDR172W	SMK1	P41808	388 aa		4.3	□□□□□ -1.72
SUP35	YDR172W	POP1	P41812	875 aa		4.3	□□□□□ -1.72
SUP35	YDR172W	ERV29	P53337	310 aa		4.3	□□□□□ -1.72
SUP35	YDR172W	MNT4	P53745	580 aa		4.3	□□□□□ -1.72
SUP35	YDR172W	PLB2	Q03674	706 aa		4.3	□□□□□ -1.72
SUP35	YDR172W	GPN3	Q06543	272 aa		4.3	□□□□□ -1.72
SUP35	YDR172W	MRPL35	Q06678	367 aa		4.3	□□□□□ -1.72
SUP35	YDR172W	BRX1	Q08235	291 aa	Known RBP	4.3	□□□□□ -1.72
SUP35	YDR172W	TIR4	Q12218	487 aa	Predicted RBP	4.3	□□□□□ -1.72
SUP35	YDR172W	YOL114C	Q12322	202 aa		4.3	□□□□□ -1.72
SUP35	YDR172W	YLR099W-A	Q3E798	87 aa		4.3	□□□□□ -1.72
SUP35	YDR172W	PDE2	P06776	526 aa		4.29	□□□□□ -1.72
SUP35	YDR172W	RPL1A	P0CX43	217 aa	Known RBP	4.29	□□□□□ -1.72
SUP35	YDR172W	RPL1B	P0CX44	217 aa	Known RBP	4.29	□□□□□ -1.72
SUP35	YDR172W	DPM1	P14020	267 aa	Known RBP	4.29	□□□□□ -1.72
SUP35	YDR172W	ERD2	P18414	219 aa		4.29	□□□□□ -1.72
SUP35	YDR172W	PRP2	P20095	876 aa	Predicted RBP	4.29	□□□□□ -1.72
SUP35	YDR172W	RPA135	P22138	1203 aa	Known RBP	4.29	□□□□□ -1.72
SUP35	YDR172W	FUN26	P31381	517 aa		4.29	□□□□□ -1.72
SUP35	YDR172W	VPS51	P36116	164 aa		4.29	□□□□□ -1.72
SUP35	YDR172W	YBR184W	P38299	523 aa		4.29	□□□□□ -1.72
SUP35	YDR172W	MBA1	P38300	278 aa		4.29	□□□□□ -1.72
SUP35	YDR172W	PTH1	P38876	190 aa	Known RBP	4.29	□□□□□ -1.72
SUP35	YDR172W	YNL208W	P40159	199 aa	Known RBP	4.29	□□□□□ -1.72
SUP35	YDR172W	ATG18	P43601	500 aa		4.29	□□□□□ -1.72
SUP35	YDR172W	BUR2	Q05949	395 aa		4.29	□□□□□ -1.72
SUP35	YDR172W	YPR091C	Q06833	770 aa		4.29	□□□□□ -1.72
SUP35	YDR172W	SSK1	Q07084	712 aa		4.29	□□□□□ -1.72
SUP35	YDR172W	CYK3	Q07533	885 aa		4.29	□□□□□ -1.72
SUP35	YDR172W	YPL199C	Q08954	240 aa		4.29	□□□□□ -1.72
SUP35	YDR172W	ENV7	Q12003	364 aa		4.29	□□□□□ -1.72
SUP35	YDR172W	HSP42	Q12329	375 aa		4.29	□□□□□ -1.72
SUP35	YDR172W	NPC2	Q12408	173 aa		4.29	□□□□□ -1.72
SUP35	YDR172W	BAR1	P12630	587 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	PRE7	P23724	241 aa	Known RBP	4.28	□□□□□ -1.72
SUP35	YDR172W	GPI12	P23797	304 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	ATG22	P25568	528 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	HOM6	P31116	359 aa	Known RBP	4.28	□□□□□ -1.72
SUP35	YDR172W	PPQ1	P32945	549 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	YOR062C	P36025	268 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	UTP30	P36144	274 aa	Known RBP	4.28	□□□□□ -1.72
SUP35	YDR172W	YBR063C	P38083	404 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	THI2	P38141	450 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	CHS7	P38843	316 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	HPA3	P39979	161 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	TIM54	P47045	478 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	COS10	P52924	374 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	YGL101W	P53144	215 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	YNR062C	P53748	327 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	NGL2	Q03264	515 aa	Known RBP	4.28	□□□□□ -1.72
SUP35	YDR172W	YDR514C	Q04408	483 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	HLR1	Q04429	423 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	YMR315W	Q04869	349 aa	Known RBP	4.28	□□□□□ -1.72
SUP35	YDR172W	RBS1	Q05672	457 aa	Known RBP	4.28	□□□□□ -1.72
SUP35	YDR172W	NMA1	Q06178	401 aa	Known RBP	4.28	□□□□□ -1.72
SUP35	YDR172W	PHO92	Q06390	306 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	TAZ1	Q06510	381 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	YLR030W	Q07967	263 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	SCM3	Q12334	223 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	RTN2	Q12443	393 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	DET1	Q99288	334 aa	Known RBP	4.28	□□□□□ -1.72
SUP35	YDR172W	CYR1	P08678	2026 aa	Known RBP	4.28	□□□□□ -1.72
SUP35	YDR172W	CYC1	P00044	109 aa	Predicted RBP	4.28	□□□□□ -1.72
SUP35	YDR172W	PHO80	P20052	293 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	SAR1	P20606	190 aa	Known RBP	4.28	□□□□□ -1.72
SUP35	YDR172W	ERG4	P25340	473 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	ERG9	P29704	444 aa		4.28	□□□□□ -1.72
SUP35	YDR172W	PRE2	P30656	287 aa	Known RBP	4.28	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms