RNA–Protein interactions for RNA: YDR088C

SLU7, Transcript of RNA splicing factor, yeast

Gene SLU7, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLU7	YDR088C	APC2	Q12440	853 aa		2.35	□□□□□ -2.03
SLU7	YDR088C	CAR2	P07991	424 aa	Known RBP	2.34	□□□□□ -2.03
SLU7	YDR088C	MSS116	P15424	664 aa	Known RBP	2.34	□□□□□ -2.03
SLU7	YDR088C	MRPL20	P22354	195 aa	Predicted RBP	2.34	□□□□□ -2.03
SLU7	YDR088C	RPB9	P27999	122 aa		2.34	□□□□□ -2.03
SLU7	YDR088C	ZRT3	P34240	503 aa		2.34	□□□□□ -2.03
SLU7	YDR088C	FRM2	P37261	193 aa		2.34	□□□□□ -2.03
SLU7	YDR088C	RFT1	P38206	574 aa	Predicted RBP	2.34	□□□□□ -2.03
SLU7	YDR088C	BDH1	P39714	382 aa		2.34	□□□□□ -2.03
SLU7	YDR088C	UFE1	P41834	346 aa		2.34	□□□□□ -2.03
SLU7	YDR088C	SDS23	P53172	527 aa		2.34	□□□□□ -2.03
SLU7	YDR088C	FMP48	P53233	369 aa		2.34	□□□□□ -2.03
SLU7	YDR088C	IRC4	Q03036	179 aa		2.34	□□□□□ -2.03
SLU7	YDR088C	UBX2	Q04228	584 aa		2.34	□□□□□ -2.03
SLU7	YDR088C	UTP15	Q04305	513 aa	Known RBP	2.34	□□□□□ -2.03
SLU7	YDR088C	ECM19	Q06011	112 aa		2.34	□□□□□ -2.03
SLU7	YDR088C	SAM4	Q08985	325 aa	Known RBP	2.34	□□□□□ -2.03
SLU7	YDR088C	YDL211C	Q12121	372 aa		2.34	□□□□□ -2.03
SLU7	YDR088C	YPR1	Q12458	312 aa		2.34	□□□□□ -2.03
SLU7	YDR088C	PRM4	Q12498	284 aa		2.34	□□□□□ -2.03
SLU7	YDR088C	DFM1	Q12743	341 aa	Known RBP	2.34	□□□□□ -2.03
SLU7	YDR088C	GCD2	P12754	651 aa	Predicted RBP	2.33	□□□□□ -2.04
SLU7	YDR088C	FUS3	P16892	353 aa	Known RBP	2.33	□□□□□ -2.04
SLU7	YDR088C	TPS2	P31688	896 aa	Known RBP	2.33	□□□□□ -2.04
SLU7	YDR088C	RAD23	P32628	398 aa	Known RBP	2.33	□□□□□ -2.04
SLU7	YDR088C	ZRT1	P32804	376 aa		2.33	□□□□□ -2.04
SLU7	YDR088C	PRY2	P36110	329 aa		2.33	□□□□□ -2.04
SLU7	YDR088C	YBR062C	P38239	180 aa		2.33	□□□□□ -2.04
SLU7	YDR088C	CTM1	P38818	585 aa		2.33	□□□□□ -2.04
SLU7	YDR088C	MNN9	P39107	395 aa	Known RBP	2.33	□□□□□ -2.04
SLU7	YDR088C	SOP4	P39543	234 aa	Predicted RBP	2.33	□□□□□ -2.04
SLU7	YDR088C	FRT2	P39734	528 aa		2.33	□□□□□ -2.04
SLU7	YDR088C	MRX8	Q05473	314 aa		2.33	□□□□□ -2.04
SLU7	YDR088C	PBP4	Q07362	185 aa	Known RBP	2.33	□□□□□ -2.04
SLU7	YDR088C	ERD1	P16151	362 aa		2.32	□□□□□ -2.04
SLU7	YDR088C	YKL187C	P34231	750 aa		2.32	□□□□□ -2.04
SLU7	YDR088C	CDC40	P40968	455 aa	Predicted RBP	2.32	□□□□□ -2.04
SLU7	YDR088C	SNX41	Q04053	625 aa		2.32	□□□□□ -2.04
SLU7	YDR088C	VAC14	Q06708	880 aa		2.32	□□□□□ -2.04
SLU7	YDR088C	ZIP1	P31111	875 aa		2.31	□□□□□ -2.04
SLU7	YDR088C	SKG6	P32900	734 aa	Predicted RBP	2.31	□□□□□ -2.04
SLU7	YDR088C	GPX1	P36014	167 aa		2.31	□□□□□ -2.04
SLU7	YDR088C	YPC1	P38298	316 aa		2.31	□□□□□ -2.04
SLU7	YDR088C	YMR262W	P38430	313 aa		2.31	□□□□□ -2.04
SLU7	YDR088C	YHR035W	P38769	630 aa		2.31	□□□□□ -2.04
SLU7	YDR088C	TRR2	P38816	342 aa		2.31	□□□□□ -2.04
SLU7	YDR088C	PFS2	P42841	465 aa	Known RBP	2.31	□□□□□ -2.04
SLU7	YDR088C	BIO4	P53630	237 aa		2.31	□□□□□ -2.04
SLU7	YDR088C	HST4	P53688	370 aa		2.31	□□□□□ -2.04
SLU7	YDR088C	YNR066C	P53752	436 aa		2.31	□□□□□ -2.04
SLU7	YDR088C	APC4	Q04601	652 aa		2.31	□□□□□ -2.04
SLU7	YDR088C	RRG8	Q06109	277 aa		2.31	□□□□□ -2.04
SLU7	YDR088C	DTD1	Q07648	150 aa	Known RBP	2.31	□□□□□ -2.04
SLU7	YDR088C	APC9	Q12107	265 aa		2.31	□□□□□ -2.04
SLU7	YDR088C	PFK27	Q12471	397 aa	Predicted RBP	2.31	□□□□□ -2.04
SLU7	YDR088C	BI3	Q9ZZW7	517 aa		2.31	□□□□□ -2.04
SLU7	YDR088C	AGA2	P32781	87 aa		2.3	□□□□□ -2.04
SLU7	YDR088C	SLM1	P40485	686 aa		2.3	□□□□□ -2.04
SLU7	YDR088C	LOC1	P43586	204 aa	Predicted RBP	2.3	□□□□□ -2.04
SLU7	YDR088C	GCD14	P46959	383 aa	Predicted RBP	2.3	□□□□□ -2.04
SLU7	YDR088C	VOA1	P53262	265 aa		2.3	□□□□□ -2.04
SLU7	YDR088C	YGR266W	P53326	701 aa		2.3	□□□□□ -2.04
SLU7	YDR088C	SMD1	Q02260	146 aa	Predicted RBP	2.3	□□□□□ -2.04
SLU7	YDR088C	UTP23	Q12339	254 aa	Known RBP	2.3	□□□□□ -2.04
SLU7	YDR088C	PRM7	Q12459	698 aa		2.3	□□□□□ -2.04
SLU7	YDR088C	RAD7	P06779	565 aa		2.29	□□□□□ -2.04
SLU7	YDR088C	YCR025C	P25352	136 aa		2.29	□□□□□ -2.04
SLU7	YDR088C	RPL5	P26321	297 aa	Known RBP	2.29	□□□□□ -2.04
SLU7	YDR088C	INO2	P26798	304 aa		2.29	□□□□□ -2.04
SLU7	YDR088C	MCH2	P36032	473 aa		2.29	□□□□□ -2.04
SLU7	YDR088C	GDS1	P41913	522 aa		2.29	□□□□□ -2.04
SLU7	YDR088C	SEC13	Q04491	297 aa	Known RBP	2.29	□□□□□ -2.04
SLU7	YDR088C	ECM18	Q04623	453 aa		2.29	□□□□□ -2.04
SLU7	YDR088C	DIB1	Q06819	143 aa	Predicted RBP	2.29	□□□□□ -2.04
SLU7	YDR088C	YOR292C	Q08743	309 aa		2.29	□□□□□ -2.04
SLU7	YDR088C	YPL245W	Q12179	454 aa	Known RBP	2.29	□□□□□ -2.04
SLU7	YDR088C	TRM10	Q12400	293 aa		2.29	□□□□□ -2.04
SLU7	YDR088C	TFC7	Q12415	435 aa		2.29	□□□□□ -2.04
SLU7	YDR088C	DCP1	Q12517	231 aa	Predicted RBP	2.29	□□□□□ -2.04
SLU7	YDR088C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	2.28	□□□□□ -2.04	not detected
SLU7	YDR088C	CPT1	P17898	393 aa		2.28	□□□□□ -2.04
SLU7	YDR088C	CKA2	P19454	339 aa		2.28	□□□□□ -2.04
SLU7	YDR088C	GPI12	P23797	304 aa		2.28	□□□□□ -2.04
SLU7	YDR088C	LOH1	P47055	219 aa		2.28	□□□□□ -2.04
SLU7	YDR088C	UBC13	P52490	153 aa		2.28	□□□□□ -2.04
SLU7	YDR088C	YGL118C	P53132	145 aa		2.28	□□□□□ -2.04
SLU7	YDR088C	PNC1	P53184	216 aa	Known RBP	2.28	□□□□□ -2.04
SLU7	YDR088C	CAX4	P53223	239 aa		2.28	□□□□□ -2.04
SLU7	YDR088C	ZRG17	P53735	605 aa		2.28	□□□□□ -2.04
SLU7	YDR088C	GMC1	Q04399	608 aa		2.28	□□□□□ -2.04
SLU7	YDR088C	YLR446W	Q06204	433 aa		2.28	□□□□□ -2.04
SLU7	YDR088C	LAG2	Q92325	660 aa		2.28	□□□□□ -2.04
SLU7	YDR088C	RPL31A	P0C2H8	113 aa	Known RBP	2.27	□□□□□ -2.05
SLU7	YDR088C	CDC42	P19073	191 aa		2.27	□□□□□ -2.05
SLU7	YDR088C	DBP3	P20447	523 aa	Known RBP	2.27	□□□□□ -2.05
SLU7	YDR088C	RPL16B	P26785	198 aa	Known RBP	2.27	□□□□□ -2.05
SLU7	YDR088C	FMT1	P32785	401 aa		2.27	□□□□□ -2.05
SLU7	YDR088C	SWD2	P36104	329 aa	Predicted RBP	2.27	□□□□□ -2.05
SLU7	YDR088C	MRPL40	P36534	297 aa		2.27	□□□□□ -2.05
SLU7	YDR088C	CPR7	P47103	393 aa		2.27	□□□□□ -2.05

Retrieved 100 of 5,963 RNA–protein pairs in 163.3 ms