RNA–Protein interactions for RNA: YDL196W

YDL196W, Transcript of Dubious open reading frame, yeast

Gene YDL196W, Length 330 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDL196W	YDL196W	YKL063C	P35725	167 aa		0.82	□□□□□ -2.28
YDL196W	YDL196W	SWD2	P36104	329 aa	Predicted RBP	0.82	□□□□□ -2.28
YDL196W	YDL196W	PRY2	P36110	329 aa		0.82	□□□□□ -2.28
YDL196W	YDL196W	MRPL27	P36526	146 aa	Predicted RBP	0.82	□□□□□ -2.28
YDL196W	YDL196W	CTM1	P38818	585 aa		0.82	□□□□□ -2.28
YDL196W	YDL196W	FET3	P38993	636 aa		0.82	□□□□□ -2.28
YDL196W	YDL196W	INA22	P40576	216 aa		0.82	□□□□□ -2.28
YDL196W	YDL196W	CDC40	P40968	455 aa	Predicted RBP	0.82	□□□□□ -2.28
YDL196W	YDL196W	YFL040W	P43562	540 aa		0.82	□□□□□ -2.28
YDL196W	YDL196W	CTK3	P46963	296 aa	Predicted RBP	0.82	□□□□□ -2.28
YDL196W	YDL196W	GPI8	P49018	411 aa		0.82	□□□□□ -2.28
YDL196W	YDL196W	RIB4	P50861	169 aa	Predicted RBP	0.82	□□□□□ -2.28
YDL196W	YDL196W	VEL1	P53058	206 aa		0.82	□□□□□ -2.28
YDL196W	YDL196W	LSG1	P53145	640 aa	Known RBP	0.82	□□□□□ -2.28
YDL196W	YDL196W	CDH1	P53197	566 aa		0.82	□□□□□ -2.28
YDL196W	YDL196W	SWC4	P53201	476 aa		0.82	□□□□□ -2.28
YDL196W	YDL196W	OKP1	P53298	406 aa		0.82	□□□□□ -2.28
YDL196W	YDL196W	YGR266W	P53326	701 aa		0.82	□□□□□ -2.28
YDL196W	YDL196W	YNL260C	P53846	198 aa		0.82	□□□□□ -2.28
YDL196W	YDL196W	SUR7	P54003	302 aa		0.82	□□□□□ -2.28
YDL196W	YDL196W	ERV25	P54837	211 aa	Known RBP	0.82	□□□□□ -2.28
YDL196W	YDL196W	PRO2	P54885	456 aa	Known RBP	0.82	□□□□□ -2.28
YDL196W	YDL196W	RPL21A	Q02753	160 aa	Known RBP	0.82	□□□□□ -2.28
YDL196W	YDL196W	YPL080C	Q02826	108 aa		0.82	□□□□□ -2.28
YDL196W	YDL196W	YPL077C	Q02831	240 aa		0.82	□□□□□ -2.28
YDL196W	YDL196W	SPO19	Q03029	223 aa		0.82	□□□□□ -2.28
YDL196W	YDL196W	ERV41	Q04651	352 aa		0.82	□□□□□ -2.28
YDL196W	YDL196W	YHC1	Q05900	231 aa	Known RBP	0.82	□□□□□ -2.28
YDL196W	YDL196W	BER1	Q06688	274 aa	Known RBP	0.82	□□□□□ -2.28
YDL196W	YDL196W	YLR012C	Q07927	99 aa		0.82	□□□□□ -2.28
YDL196W	YDL196W	RDL2	Q08742	149 aa	Known RBP	0.82	□□□□□ -2.28
YDL196W	YDL196W	VIK1	Q12045	647 aa		0.82	□□□□□ -2.28
YDL196W	YDL196W	UTP23	Q12339	254 aa	Known RBP	0.82	□□□□□ -2.28
YDL196W	YDL196W	RPN6	Q12377	434 aa		0.82	□□□□□ -2.28
YDL196W	YDL196W	ERP3	Q12403	225 aa		0.82	□□□□□ -2.28
YDL196W	YDL196W	TFC7	Q12415	435 aa		0.82	□□□□□ -2.28
YDL196W	YDL196W	PAA1	Q12447	191 aa	Known RBP	0.82	□□□□□ -2.28
YDL196W	YDL196W	SSA3	P09435	649 aa	Known RBP	0.81	□□□□□ -2.28
YDL196W	YDL196W	OM45	P16547	393 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	DBP3	P20447	523 aa	Known RBP	0.81	□□□□□ -2.28
YDL196W	YDL196W	VPS1	P21576	704 aa	Known RBP	0.81	□□□□□ -2.28
YDL196W	YDL196W	CSM1	P25651	190 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	PMT2	P31382	759 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	GCG1	P32656	232 aa	Known RBP	0.81	□□□□□ -2.28
YDL196W	YDL196W	SKG6	P32900	734 aa	Predicted RBP	0.81	□□□□□ -2.28
YDL196W	YDL196W	MRPL6	P32904	214 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	0.81	□□□□□ -2.28	not detected
YDL196W	YDL196W	ECT1	P33412	323 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	YKL187C	P34231	750 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	MCH2	P36032	473 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	SHE1	P38200	338 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	RFT1	P38206	574 aa	Predicted RBP	0.81	□□□□□ -2.28
YDL196W	YDL196W	HIS2	P38635	335 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	GGC1	P38988	300 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	RTT105	P40063	208 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	YIA6	P40556	373 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	YIR035C	P40579	254 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	YCH1	P42937	148 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	PMT4	P46971	762 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	YJR054W	P47114	497 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	GTO1	P48239	356 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	BIO3	P50277	480 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	SEH1	P53011	349 aa	Known RBP	0.81	□□□□□ -2.28
YDL196W	YDL196W	PNC1	P53184	216 aa	Known RBP	0.81	□□□□□ -2.28
YDL196W	YDL196W	COG7	P53195	279 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	DBP6	P53734	629 aa	Known RBP	0.81	□□□□□ -2.28
YDL196W	YDL196W	SED5	Q01590	340 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	RMI1	Q02685	241 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	MRX11	Q03079	207 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	ABZ2	Q03266	374 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	SNX41	Q04053	625 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	UTP15	Q04305	513 aa	Known RBP	0.81	□□□□□ -2.28
YDL196W	YDL196W	MRX8	Q05473	314 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	ARC18	Q05933	178 aa	Known RBP	0.81	□□□□□ -2.28
YDL196W	YDL196W	FAR10	Q06001	478 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	STE23	Q06010	1027 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	CUR1	Q06469	252 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	PBP4	Q07362	185 aa	Known RBP	0.81	□□□□□ -2.28
YDL196W	YDL196W	MMT2	Q08970	484 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	TAF10	Q12030	206 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	MCT1	Q12283	360 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	MRPL23	Q12487	163 aa	Predicted RBP	0.81	□□□□□ -2.28
YDL196W	YDL196W	YPR064W	Q12492	139 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	LAG2	Q92325	660 aa		0.81	□□□□□ -2.28
YDL196W	YDL196W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	0.8	□□□□□ -2.28	not detected
YDL196W	YDL196W	ATP6	P00854	259 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	TPI1	P00942	248 aa	Known RBP	0.8	□□□□□ -2.28
YDL196W	YDL196W	RPL31A	P0C2H8	113 aa	Known RBP	0.8	□□□□□ -2.28
YDL196W	YDL196W	HPR1	P17629	752 aa	Known RBP	0.8	□□□□□ -2.28
YDL196W	YDL196W	MRPL20	P22354	195 aa	Predicted RBP	0.8	□□□□□ -2.28
YDL196W	YDL196W	YSR3	P23501	404 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	GPI12	P23797	304 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	MEK1	P24719	497 aa	Predicted RBP	0.8	□□□□□ -2.28
YDL196W	YDL196W	VPH2	P32341	215 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	PDC2	P32896	925 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	CYM1	P32898	989 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	CSE1	P33307	960 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	TIP20	P33891	701 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	YKL070W	P36087	169 aa		0.8	□□□□□ -2.28
YDL196W	YDL196W	MRPL37	P36532	105 aa		0.8	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms