RNA–Protein interactions for RNA: YCR024C-A

PMP1, Transcript of Regulatory subunit for the plasma membrane H(+)-ATPase Pma1p, yeast

Gene PMP1, Length 123 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMP1	YCR024C-A	NAS2	P40555	220 aa		0.69	□□□□□ -2.3
PMP1	YCR024C-A	YCH1	P42937	148 aa		0.69	□□□□□ -2.3
PMP1	YCR024C-A	YFL040W	P43562	540 aa		0.69	□□□□□ -2.3
PMP1	YCR024C-A	SHE4	P51534	789 aa		0.69	□□□□□ -2.3
PMP1	YCR024C-A	CAX4	P53223	239 aa		0.69	□□□□□ -2.3
PMP1	YCR024C-A	VOA1	P53262	265 aa		0.69	□□□□□ -2.3
PMP1	YCR024C-A	YPL080C	Q02826	108 aa		0.69	□□□□□ -2.3
PMP1	YCR024C-A	ABZ2	Q03266	374 aa		0.69	□□□□□ -2.3
PMP1	YCR024C-A	INP2	Q03824	705 aa		0.69	□□□□□ -2.3
PMP1	YCR024C-A	SNX41	Q04053	625 aa		0.69	□□□□□ -2.3
PMP1	YCR024C-A	ARC18	Q05933	178 aa	Known RBP	0.69	□□□□□ -2.3
PMP1	YCR024C-A	MRX9	Q07349	420 aa	Known RBP	0.69	□□□□□ -2.3
PMP1	YCR024C-A	YPL278C	Q08990	100 aa		0.69	□□□□□ -2.3
PMP1	YCR024C-A	SLM3	Q12093	417 aa		0.69	□□□□□ -2.3
PMP1	YCR024C-A	RTC5	Q12108	567 aa	Known RBP	0.69	□□□□□ -2.3
PMP1	YCR024C-A	RRP42	Q12277	265 aa	Predicted RBP	0.69	□□□□□ -2.3
PMP1	YCR024C-A	UTP23	Q12339	254 aa	Known RBP	0.69	□□□□□ -2.3
PMP1	YCR024C-A	RPN6	Q12377	434 aa		0.69	□□□□□ -2.3
PMP1	YCR024C-A	YPR096C	O13587	100 aa		0.68	□□□□□ -2.3
PMP1	YCR024C-A	CBP2	P03874	630 aa	Predicted RBP	0.68	□□□□□ -2.3
PMP1	YCR024C-A	CAR2	P07991	424 aa	Known RBP	0.68	□□□□□ -2.3
PMP1	YCR024C-A	VPS1	P21576	704 aa	Known RBP	0.68	□□□□□ -2.3
PMP1	YCR024C-A	KRR1	P25586	316 aa	Predicted RBP	0.68	□□□□□ -2.3
PMP1	YCR024C-A	RPL16B	P26785	198 aa	Known RBP	0.68	□□□□□ -2.3
PMP1	YCR024C-A	MRPL6	P32904	214 aa		0.68	□□□□□ -2.3
PMP1	YCR024C-A	BUD2	P33314	1104 aa		0.68	□□□□□ -2.3
PMP1	YCR024C-A	YKL063C	P35725	167 aa		0.68	□□□□□ -2.3
PMP1	YCR024C-A	SWD2	P36104	329 aa	Predicted RBP	0.68	□□□□□ -2.3
PMP1	YCR024C-A	PEX32	P38292	413 aa		0.68	□□□□□ -2.3
PMP1	YCR024C-A	YHR035W	P38769	630 aa		0.68	□□□□□ -2.3
PMP1	YCR024C-A	TRR2	P38816	342 aa		0.68	□□□□□ -2.3
PMP1	YCR024C-A	LIN1	P38852	340 aa	Predicted RBP	0.68	□□□□□ -2.3
PMP1	YCR024C-A	PET8	P38921	284 aa		0.68	□□□□□ -2.3
PMP1	YCR024C-A	PES4	P39684	611 aa		0.68	□□□□□ -2.3
PMP1	YCR024C-A	SSO2	P39926	295 aa		0.68	□□□□□ -2.3
PMP1	YCR024C-A	UFE1	P41834	346 aa		0.68	□□□□□ -2.3
PMP1	YCR024C-A	MIC19	P43594	170 aa		0.68	□□□□□ -2.3
PMP1	YCR024C-A	PMT4	P46971	762 aa		0.68	□□□□□ -2.3
PMP1	YCR024C-A	SED5	Q01590	340 aa		0.68	□□□□□ -2.3
PMP1	YCR024C-A	YMR111C	Q04461	462 aa	Predicted RBP	0.68	□□□□□ -2.3
PMP1	YCR024C-A	APC4	Q04601	652 aa		0.68	□□□□□ -2.3
PMP1	YCR024C-A	RDL2	Q08742	149 aa	Known RBP	0.68	□□□□□ -2.3
PMP1	YCR024C-A	YOR292C	Q08743	309 aa		0.68	□□□□□ -2.3
PMP1	YCR024C-A	VIK1	Q12045	647 aa		0.68	□□□□□ -2.3
PMP1	YCR024C-A	REX3	Q12090	404 aa		0.68	□□□□□ -2.3
PMP1	YCR024C-A	YPL150W	Q12152	901 aa		0.68	□□□□□ -2.3
PMP1	YCR024C-A	YPL245W	Q12179	454 aa	Known RBP	0.68	□□□□□ -2.3
PMP1	YCR024C-A	MDY2	Q12285	212 aa		0.68	□□□□□ -2.3
PMP1	YCR024C-A	PAA1	Q12447	191 aa	Known RBP	0.68	□□□□□ -2.3
PMP1	YCR024C-A	PFK27	Q12471	397 aa	Predicted RBP	0.68	□□□□□ -2.3
PMP1	YCR024C-A	PRM4	Q12498	284 aa		0.68	□□□□□ -2.3
PMP1	YCR024C-A	IZH4	Q99393	312 aa		0.68	□□□□□ -2.3
PMP1	YCR024C-A	TDH3	P00359	332 aa	Known RBP RIP-Chip data	0.67	□□□□□ -2.3	not detected
PMP1	YCR024C-A	ILV1	P00927	576 aa	Known RBP	0.67	□□□□□ -2.3
PMP1	YCR024C-A	GAL7	P08431	366 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	GCD2	P12754	651 aa	Predicted RBP	0.67	□□□□□ -2.3
PMP1	YCR024C-A	CUP2	P15315	225 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	COX10	P21592	462 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	PET18	P25362	215 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	IMP1	P28627	190 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	CDC13	P32797	924 aa	Known RBP	0.67	□□□□□ -2.3
PMP1	YCR024C-A	CYM1	P32898	989 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	SUR1	P33300	382 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	TIP20	P33891	701 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	YKL187C	P34231	750 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	RCK1	P38622	512 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	YDR089W	P38966	869 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	ASP1	P38986	381 aa	Predicted RBP	0.67	□□□□□ -2.3
PMP1	YCR024C-A	MNN9	P39107	395 aa	Known RBP	0.67	□□□□□ -2.3
PMP1	YCR024C-A	SOP4	P39543	234 aa	Predicted RBP	0.67	□□□□□ -2.3
PMP1	YCR024C-A	SLM1	P40485	686 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	ECO1	P43605	281 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	KEL2	P50090	882 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	SDS23	P53172	527 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	COG7	P53195	279 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	SWC4	P53201	476 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	TPC1	P53257	314 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	YNR066C	P53752	436 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	SCS7	Q03529	384 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	VPS20	Q04272	221 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	GMC1	Q04399	608 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	FAR10	Q06001	478 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	PIN3	Q06449	215 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	ASR1	Q06834	288 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	RPN8	Q08723	338 aa	Known RBP	0.67	□□□□□ -2.3
PMP1	YCR024C-A	YPR063C	Q12160	140 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	SIA1	Q12212	622 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	IES3	Q12345	250 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	DCP1	Q12517	231 aa	Predicted RBP	0.67	□□□□□ -2.3
PMP1	YCR024C-A	YIL002W-A	Q3E7Z5	69 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	LAG2	Q92325	660 aa		0.67	□□□□□ -2.3
PMP1	YCR024C-A	HPR1	P17629	752 aa	Known RBP	0.66	□□□□□ -2.3
PMP1	YCR024C-A	UGA1	P17649	471 aa		0.66	□□□□□ -2.3
PMP1	YCR024C-A	IFM1	P25038	676 aa		0.66	□□□□□ -2.3
PMP1	YCR024C-A	RPL5	P26321	297 aa	Known RBP	0.66	□□□□□ -2.3
PMP1	YCR024C-A	CSE1	P33307	960 aa		0.66	□□□□□ -2.3
PMP1	YCR024C-A	RPC25	P35718	212 aa		0.66	□□□□□ -2.3
PMP1	YCR024C-A	MCH2	P36032	473 aa		0.66	□□□□□ -2.3
PMP1	YCR024C-A	YKL162C	P36052	402 aa		0.66	□□□□□ -2.3
PMP1	YCR024C-A	PRY2	P36110	329 aa		0.66	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 86.7 ms