RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W PMT2P31382 759 aa1.81□□□□□ -2.12
SNC1YAL030W KTI12P34253 313 aaKnown RBP1.81□□□□□ -2.12
SNC1YAL030W YKL071WP36086 256 aa1.81□□□□□ -2.12
SNC1YAL030W SHE3P38272 425 aaKnown RBP1.81□□□□□ -2.12
SNC1YAL030W OM14P38325 134 aa1.81□□□□□ -2.12
SNC1YAL030W RCK1P38622 512 aa1.81□□□□□ -2.12
SNC1YAL030W EFM1P38732 585 aa1.81□□□□□ -2.12
SNC1YAL030W BAT1P38891 393 aaKnown RBP1.81□□□□□ -2.12
SNC1YAL030W PRM9P39551 298 aa1.81□□□□□ -2.12
SNC1YAL030W UTP18P40362 594 aaPredicted RBP1.81□□□□□ -2.12
SNC1YAL030W SHQ1P40486 507 aaPredicted RBP1.81□□□□□ -2.12
SNC1YAL030W YIA6P40556 373 aa1.81□□□□□ -2.12
SNC1YAL030W SNM1P40993 198 aa1.81□□□□□ -2.12
SNC1YAL030W GAB1P41733 394 aa1.81□□□□□ -2.12
SNC1YAL030W GDS1P41913 522 aa1.81□□□□□ -2.12
SNC1YAL030W GCN20P43535 752 aaKnown RBP1.81□□□□□ -2.12
SNC1YAL030W TIS11P47977 285 aa1.81□□□□□ -2.12
SNC1YAL030W BIO3P50277 480 aa1.81□□□□□ -2.12
SNC1YAL030W YGR015CP53208 328 aa1.81□□□□□ -2.12
SNC1YAL030W SLT2Q00772 484 aa1.81□□□□□ -2.12
SNC1YAL030W SCS7Q03529 384 aa1.81□□□□□ -2.12
SNC1YAL030W GRX3Q03835 250 aa1.81□□□□□ -2.12
SNC1YAL030W ADH6Q04894 360 aaKnown RBP1.81□□□□□ -2.12
SNC1YAL030W GAS2Q06135 555 aa1.81□□□□□ -2.12
SNC1YAL030W ASR1Q06834 288 aa1.81□□□□□ -2.12
SNC1YAL030W ERP3Q12403 225 aa1.81□□□□□ -2.12
SNC1YAL030W ADH2P00331 348 aaKnown RBP1.8□□□□□ -2.12
SNC1YAL030W TDH3P00359 332 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
SNC1YAL030W ILV1P00927 576 aaKnown RBP1.8□□□□□ -2.12
SNC1YAL030W POL30P15873 258 aaKnown RBP1.8□□□□□ -2.12
SNC1YAL030W MET16P18408 261 aaPredicted RBP1.8□□□□□ -2.12
SNC1YAL030W ZRC1P20107 442 aa1.8□□□□□ -2.12
SNC1YAL030W CDC50P25656 391 aa1.8□□□□□ -2.12
SNC1YAL030W URA10P30402 227 aa1.8□□□□□ -2.12
SNC1YAL030W CBF5P33322 483 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
SNC1YAL030W YKL187CP34231 750 aa1.8□□□□□ -2.12
SNC1YAL030W YKL063CP35725 167 aa1.8□□□□□ -2.12
SNC1YAL030W SOL2P37262 315 aa1.8□□□□□ -2.12
SNC1YAL030W BFR1P38934 470 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
SNC1YAL030W MIG3P39943 394 aa1.8□□□□□ -2.12
SNC1YAL030W OXA1P39952 402 aa1.8□□□□□ -2.12
SNC1YAL030W HEM14P40012 539 aa1.8□□□□□ -2.12
SNC1YAL030W DDI1P40087 428 aa1.8□□□□□ -2.12
SNC1YAL030W COA1P40452 197 aa1.8□□□□□ -2.12
SNC1YAL030W FMC1P40491 155 aa1.8□□□□□ -2.12
SNC1YAL030W MEP2P41948 499 aa1.8□□□□□ -2.12
SNC1YAL030W YPT32P51996 222 aaKnown RBP1.8□□□□□ -2.12
SNC1YAL030W TRM44Q02648 567 aaKnown RBP1.8□□□□□ -2.12
SNC1YAL030W CWC21Q03375 135 aaKnown RBP1.8□□□□□ -2.12
SNC1YAL030W ENT5Q03769 411 aaKnown RBP1.8□□□□□ -2.12
SNC1YAL030W YET2Q04210 160 aa1.8□□□□□ -2.12
SNC1YAL030W YTH1Q06102 208 aaPredicted RBP1.8□□□□□ -2.12
SNC1YAL030W YLR446WQ06204 433 aa1.8□□□□□ -2.12
SNC1YAL030W RRG7Q08774 242 aaPredicted RBP1.8□□□□□ -2.12
SNC1YAL030W YPL245WQ12179 454 aaKnown RBP1.8□□□□□ -2.12
SNC1YAL030W RBD2Q12270 262 aa1.8□□□□□ -2.12
SNC1YAL030W YPR064WQ12492 139 aa1.8□□□□□ -2.12
SNC1YAL030W PRB1P09232 635 aa1.79□□□□□ -2.12
SNC1YAL030W TFS1P14306 219 aa1.79□□□□□ -2.12
SNC1YAL030W ERD1P16151 362 aa1.79□□□□□ -2.12
SNC1YAL030W DAL82P21705 255 aa1.79□□□□□ -2.12
SNC1YAL030W NTG1P31378 399 aa1.79□□□□□ -2.12
SNC1YAL030W IMP3P32899 183 aaPredicted RBP1.79□□□□□ -2.12
SNC1YAL030W PRS4P38063 326 aaPredicted RBP1.79□□□□□ -2.12
SNC1YAL030W YPC1P38298 316 aa1.79□□□□□ -2.12
SNC1YAL030W TIM17P39515 158 aa1.79□□□□□ -2.12
SNC1YAL030W ALD5P40047 520 aaKnown RBP1.79□□□□□ -2.12
SNC1YAL030W YJR054WP47114 497 aa1.79□□□□□ -2.12
SNC1YAL030W SDS23P53172 527 aa1.79□□□□□ -2.12
SNC1YAL030W CPD1P53314 239 aa1.79□□□□□ -2.12
SNC1YAL030W YNL134CP53912 376 aaKnown RBP1.79□□□□□ -2.12
SNC1YAL030W RNH201P53942 307 aa1.79□□□□□ -2.12
SNC1YAL030W ALG11P53954 548 aaKnown RBP1.79□□□□□ -2.12
SNC1YAL030W KTR6P54070 446 aa1.79□□□□□ -2.12
SNC1YAL030W PET117Q02771 107 aa1.79□□□□□ -2.12
SNC1YAL030W YMR209CQ03648 457 aa1.79□□□□□ -2.12
SNC1YAL030W VBA1Q04301 562 aa1.79□□□□□ -2.12
SNC1YAL030W YLR283WQ05867 314 aa1.79□□□□□ -2.12
SNC1YAL030W YLR177WQ06251 628 aa1.79□□□□□ -2.12
SNC1YAL030W CTS2Q06350 511 aa1.79□□□□□ -2.12
SNC1YAL030W ARV1Q06541 321 aa1.79□□□□□ -2.12
SNC1YAL030W TY3A-GQ12173 290 aa1.79□□□□□ -2.12
SNC1YAL030W YOL107WQ12239 342 aa1.79□□□□□ -2.12
SNC1YAL030W RRP42Q12277 265 aaPredicted RBP1.79□□□□□ -2.12
SNC1YAL030W HRT3Q12347 344 aa1.79□□□□□ -2.12
SNC1YAL030W WTM1Q12363 437 aaKnown RBP1.79□□□□□ -2.12
SNC1YAL030W LAG2Q92325 660 aa1.79□□□□□ -2.12
SNC1YAL030W TY3A-IQ99219 290 aa1.79□□□□□ -2.12
SNC1YAL030W MHP1P43638 1398 aa1.79□□□□□ -2.12
SNC1YAL030W RPS14AP06367 137 aaKnown RBP1.78□□□□□ -2.12
SNC1YAL030W RAD3P06839 778 aa1.78□□□□□ -2.12
SNC1YAL030W SPS100P13130 326 aa1.78□□□□□ -2.12
SNC1YAL030W VPS1P21576 704 aaKnown RBP1.78□□□□□ -2.12
SNC1YAL030W CMK2P22517 447 aa1.78□□□□□ -2.12
SNC1YAL030W INO2P26798 304 aa1.78□□□□□ -2.12
SNC1YAL030W CWP1P28319 239 aa1.78□□□□□ -2.12
SNC1YAL030W VPH2P32341 215 aa1.78□□□□□ -2.12
SNC1YAL030W ARO4P32449 370 aaKnown RBP1.78□□□□□ -2.12
SNC1YAL030W SUA5P32579 426 aa1.78□□□□□ -2.12
SNC1YAL030W CSE1P33307 960 aa1.78□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 193.8 ms