RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 BICD1Q96G01 975 aa17.45■□□□□ 0.38
CBWD3-216ENST00000621396 FAM49AQ9H0Q0 323 aaPredicted RBP17.45■□□□□ 0.38
CBWD3-216ENST00000621396 AKT3Q9Y243 479 aa17.45■□□□□ 0.38
CBWD3-216ENST00000621396 K7ERI5 159 aa17.44■□□□□ 0.38
CBWD3-216ENST00000621396 NAMPTP43490 491 aa17.44■□□□□ 0.38
CBWD3-216ENST00000621396 RTP1P59025 263 aa17.44■□□□□ 0.38
CBWD3-216ENST00000621396 PURAQ00577 322 aaKnown RBP17.44■□□□□ 0.38
CBWD3-216ENST00000621396 MFSD10Q14728 455 aa17.44■□□□□ 0.38
CBWD3-216ENST00000621396 DCAF17Q5H9S7 520 aaPredicted RBP17.44■□□□□ 0.38
CBWD3-216ENST00000621396 PPP4R3CPQ6ZMV5 832 aa17.44■□□□□ 0.38
CBWD3-216ENST00000621396 CDR2LQ86X02 465 aaPredicted RBP17.44■□□□□ 0.38
CBWD3-216ENST00000621396 FAM114A1Q8IWE2 563 aa17.44■□□□□ 0.38
CBWD3-216ENST00000621396 ZBTB45Q96K62 511 aaPredicted RBP17.44■□□□□ 0.38
CBWD3-216ENST00000621396 BEGAINQ9BUH8 593 aa17.44■□□□□ 0.38
CBWD3-216ENST00000621396 TMEM206Q9H813 350 aa17.44■□□□□ 0.38
CBWD3-216ENST00000621396 MMRN2Q9H8L6 949 aa17.44■□□□□ 0.38
CBWD3-216ENST00000621396 XPNPEP3Q9NQH7 507 aa17.44■□□□□ 0.38
CBWD3-216ENST00000621396 HSPA6P17066 643 aa17.43■□□□□ 0.38
CBWD3-216ENST00000621396 IER5Q5VY09 327 aa17.43■□□□□ 0.38
CBWD3-216ENST00000621396 MAP4K3Q8IVH8 894 aa17.43■□□□□ 0.38
CBWD3-216ENST00000621396 ERO1AQ96HE7 468 aa17.43■□□□□ 0.38
CBWD3-216ENST00000621396 KCNF1Q9H3M0 494 aa17.43■□□□□ 0.38
CBWD3-216ENST00000621396 ST6GALNAC4Q9H4F1 302 aa17.43■□□□□ 0.38
CBWD3-216ENST00000621396 MINDY3Q9H8M7 445 aa17.43■□□□□ 0.38
CBWD3-216ENST00000621396 PTCH2Q9Y6C5 1203 aa17.43■□□□□ 0.38
CBWD3-216ENST00000621396 EXOC3O60645 756 aa17.43■□□□□ 0.38
CBWD3-216ENST00000621396 FGFR1OPO95684 399 aaKnown RBP17.43■□□□□ 0.38
CBWD3-216ENST00000621396 TPM3P06753 285 aa17.43■□□□□ 0.38
CBWD3-216ENST00000621396 IQCF3P0C7M6 154 aa17.43■□□□□ 0.38
CBWD3-216ENST00000621396 LAMA2P24043 3122 aaKnown RBP17.43■□□□□ 0.38
CBWD3-216ENST00000621396 ADKP55263 362 aaKnown RBP17.43■□□□□ 0.38
CBWD3-216ENST00000621396 IRF5Q13568 498 aa17.43■□□□□ 0.38
CBWD3-216ENST00000621396 ZNF484Q5JVG2 852 aa17.43■□□□□ 0.38
CBWD3-216ENST00000621396 TCERG1LQ5VWI1 586 aa17.43■□□□□ 0.38
CBWD3-216ENST00000621396 ARMCX5Q6P1M9 558 aa17.43■□□□□ 0.38
CBWD3-216ENST00000621396 CACTINQ8WUQ7 758 aaKnown RBP17.43■□□□□ 0.38
CBWD3-216ENST00000621396 CRACR2AQ9BSW2 395 aa17.43■□□□□ 0.38
CBWD3-216ENST00000621396 TARS2Q9BW92 718 aaKnown RBP17.43■□□□□ 0.38
CBWD3-216ENST00000621396 NDST4Q9H3R1 872 aa17.43■□□□□ 0.38
CBWD3-216ENST00000621396 LGALS16A8MUM7 142 aa17.42■□□□□ 0.38
CBWD3-216ENST00000621396 HMGCRP04035 888 aa17.42■□□□□ 0.38
CBWD3-216ENST00000621396 APBA1Q02410 837 aa17.42■□□□□ 0.38
CBWD3-216ENST00000621396 VWA3BQ502W6 1294 aa17.42■□□□□ 0.38
CBWD3-216ENST00000621396 SEZ6Q53EL9 994 aa17.42■□□□□ 0.38
CBWD3-216ENST00000621396 BRDTQ58F21 947 aaPredicted RBP17.42■□□□□ 0.38
CBWD3-216ENST00000621396 SPECC1LQ69YQ0 1117 aa17.42■□□□□ 0.38
CBWD3-216ENST00000621396 NFRKBQ6P4R8 1299 aa17.42■□□□□ 0.38
CBWD3-216ENST00000621396 ZC3H3Q8IXZ2 948 aaKnown RBP17.42■□□□□ 0.38
CBWD3-216ENST00000621396 RETREG2Q8NC44 543 aa17.42■□□□□ 0.38
CBWD3-216ENST00000621396 CEP63Q96MT8 703 aa17.42■□□□□ 0.38
CBWD3-216ENST00000621396 HDAC6Q9UBN7 1215 aa17.42■□□□□ 0.38
CBWD3-216ENST00000621396 A0A087WZ62 844 aa17.42■□□□□ 0.38
CBWD3-216ENST00000621396 RNF225M0QZC1 329 aaPredicted RBP17.42■□□□□ 0.38
CBWD3-216ENST00000621396 TREHO43280 583 aa17.42■□□□□ 0.38
CBWD3-216ENST00000621396 INHAP05111 366 aa17.42■□□□□ 0.38
CBWD3-216ENST00000621396 RPL13P26373 211 aaKnown RBP17.42■□□□□ 0.38
CBWD3-216ENST00000621396 PSEN2P49810 448 aa17.42■□□□□ 0.38
CBWD3-216ENST00000621396 GJA9P57773 515 aa17.42■□□□□ 0.38
CBWD3-216ENST00000621396 GPIHBP1Q8IV16 184 aa17.42■□□□□ 0.38
CBWD3-216ENST00000621396 FAM84AQ96KN4 292 aa17.42■□□□□ 0.38
CBWD3-216ENST00000621396 FDXACB1Q9BRP7 624 aaPredicted RBP17.42■□□□□ 0.38
CBWD3-216ENST00000621396 HSPBP1Q9NZL4 362 aa17.42■□□□□ 0.38
CBWD3-216ENST00000621396 ANKFY1Q9P2R3 1169 aa17.42■□□□□ 0.38
CBWD3-216ENST00000621396 ARMCX3Q9UH62 379 aaPredicted RBP17.42■□□□□ 0.38
CBWD3-216ENST00000621396 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.42■□□□□ 0.38
CBWD3-216ENST00000621396 UBE4BO95155 1302 aa17.41■□□□□ 0.38
CBWD3-216ENST00000621396 INO80B-WBP1J3KQ70 363 aa17.41■□□□□ 0.38
CBWD3-216ENST00000621396 HARSP12081 509 aaKnown RBP17.41■□□□□ 0.38
CBWD3-216ENST00000621396 PBX1P40424 430 aa17.41■□□□□ 0.38
CBWD3-216ENST00000621396 DNM2P50570 870 aa17.41■□□□□ 0.38
CBWD3-216ENST00000621396 RUFY4Q6ZNE9 571 aa17.41■□□□□ 0.38
CBWD3-216ENST00000621396 TRIM59Q8IWR1 403 aa17.41■□□□□ 0.38
CBWD3-216ENST00000621396 TCP11Q8WWU5 503 aa17.41■□□□□ 0.38
CBWD3-216ENST00000621396 POMGNT1Q8WZA1 660 aa17.41■□□□□ 0.38
CBWD3-216ENST00000621396 INO80BQ9C086 356 aaPredicted RBP17.41■□□□□ 0.38
CBWD3-216ENST00000621396 HAPLN2Q9GZV7 340 aa17.41■□□□□ 0.38
CBWD3-216ENST00000621396 Q9Y3F1 56 aa17.41■□□□□ 0.38
CBWD3-216ENST00000621396 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.41■□□□□ 0.38
CBWD3-216ENST00000621396 B4GALT5O43286 388 aa17.41■□□□□ 0.38
CBWD3-216ENST00000621396 ADAMTS4O75173 837 aa17.41■□□□□ 0.38
CBWD3-216ENST00000621396 TRIM49P0CI25 452 aa17.41■□□□□ 0.38
CBWD3-216ENST00000621396 TRIM49CP0CI26 452 aa17.41■□□□□ 0.38
CBWD3-216ENST00000621396 DLG4P78352 724 aa17.41■□□□□ 0.38
CBWD3-216ENST00000621396 STRN3Q13033 797 aa17.41■□□□□ 0.38
CBWD3-216ENST00000621396 ALCAMQ13740 583 aa17.41■□□□□ 0.38
CBWD3-216ENST00000621396 MXD4Q14582 209 aaPredicted RBP17.41■□□□□ 0.38
CBWD3-216ENST00000621396 PPP2R5AQ15172 486 aa17.41■□□□□ 0.38
CBWD3-216ENST00000621396 SYCP1Q15431 976 aa17.41■□□□□ 0.38
CBWD3-216ENST00000621396 KCNA10Q16322 511 aa17.41■□□□□ 0.38
CBWD3-216ENST00000621396 KIZQ2M2Z5 673 aa17.41■□□□□ 0.38
CBWD3-216ENST00000621396 FAM186BQ8IYM0 893 aa17.41■□□□□ 0.38
CBWD3-216ENST00000621396 KIAA0319LQ8IZA0 1049 aa17.41■□□□□ 0.38
CBWD3-216ENST00000621396 IFT122Q9HBG6 1241 aa17.41■□□□□ 0.38
CBWD3-216ENST00000621396 DMAC2Q9NW81 257 aa17.41■□□□□ 0.38
CBWD3-216ENST00000621396 ASGR1P07306 291 aa17.4■□□□□ 0.38
CBWD3-216ENST00000621396 FGFR4P22455 802 aa17.4■□□□□ 0.38
CBWD3-216ENST00000621396 LIG4P49917 911 aa17.4■□□□□ 0.38
CBWD3-216ENST00000621396 NLRP11P59045 1033 aaKnown RBP17.4■□□□□ 0.38
CBWD3-216ENST00000621396 C1QTNF8P60827 252 aa17.4■□□□□ 0.38
CBWD3-216ENST00000621396 RBL2Q08999 1139 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms