RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 K7ENM7 598 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 NCK2O43639 380 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 ZEB2O60315 1214 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 ZBED4O75132 1171 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 RTN2O75298 545 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 LRRN2O75325 713 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 BCRP11274 1271 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 MCM3P25205 808 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 PON1P27169 355 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 SMTNP53814 917 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 FRMD5Q7Z6J6 570 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 KLRG1Q96E93 195 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 SH3GL2Q99962 352 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 PCIF1Q9H4Z3 704 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 AGPAT3Q9NRZ7 376 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 GCNT4Q9P109 453 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 ADAMTS1Q9UHI8 967 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 ZNF112Q9UJU3 913 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 CENPFP49454 3210 aa12.4□□□□□ -0.42
PCDHGA9-202ENST00000616887 A0A087X0T9 212 aa12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 A0A1B0GUA9 196 aa12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 PDE2AO00408 941 aaPredicted RBP12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 FAM228BP0C875 321 aa12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 EPB41P11171 864 aaKnown RBP12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 UCHL3P15374 230 aa12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 GAP43P17677 238 aa12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 CDR1P51861 262 aa12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 GHRHRQ02643 423 aa12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 FSTL1Q12841 308 aa12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 NAA25Q14CX7 972 aa12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 E2F5Q15329 346 aa12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 EXOC3L4Q17RC7 722 aa12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 CBWD6Q4V339 395 aa12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 CBWD3Q5JTY5 395 aa12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 CBWD5Q5RIA9 395 aa12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 BORCS6Q96GS4 357 aa12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 EHD2Q9NZN4 543 aa12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 FAM184BQ9ULE4 1060 aa12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 RASSF9O75901 435 aa12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 RGS20O76081 388 aa12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 CLSTN1O94985 981 aa12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 P4HBP07237 508 aaKnown RBP12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 HOXA7P31268 230 aaPredicted RBP12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 YWHABP31946 246 aaKnown RBP12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 CXCR5P32302 372 aa12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 MAGEA1P43355 309 aa12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 DNA2P51530 1060 aa12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 CCDC13Q8IYE1 715 aa12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 FAM186BQ8IYM0 893 aa12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 ZNF526Q8TF50 670 aaPredicted RBP12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 SLC40A1Q9NP59 571 aa12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 SIX2Q9NPC8 291 aa12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 DOCK1Q14185 1865 aa12.39□□□□□ -0.43
PCDHGA9-202ENST00000616887 EME2A4GXA9 379 aaPredicted RBP12.38□□□□□ -0.43
PCDHGA9-202ENST00000616887 EIF3DO15371 548 aaKnown RBP eCLIP12.38□□□□□ -0.43
PCDHGA9-202ENST00000616887 LCA5LO95447 670 aa12.38□□□□□ -0.43
PCDHGA9-202ENST00000616887 RPSAP08865 295 aaKnown RBP12.38□□□□□ -0.43
PCDHGA9-202ENST00000616887 QARSP47897 775 aaKnown RBP12.38□□□□□ -0.43
PCDHGA9-202ENST00000616887 ATP1A2P50993 1020 aa12.38□□□□□ -0.43
PCDHGA9-202ENST00000616887 DLG4P78352 724 aa12.38□□□□□ -0.43
PCDHGA9-202ENST00000616887 PTK2Q05397 1052 aa12.38□□□□□ -0.43
PCDHGA9-202ENST00000616887 PTPROQ16827 1216 aa12.38□□□□□ -0.43
PCDHGA9-202ENST00000616887 SLC9C1Q4G0N8 1177 aa12.38□□□□□ -0.43
PCDHGA9-202ENST00000616887 KLHDC7AQ5VTJ3 777 aa12.38□□□□□ -0.43
PCDHGA9-202ENST00000616887 ZNF483Q8TF39 744 aaPredicted RBP12.38□□□□□ -0.43
PCDHGA9-202ENST00000616887 SCLT1Q96NL6 688 aa12.38□□□□□ -0.43
PCDHGA9-202ENST00000616887 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.38□□□□□ -0.43
PCDHGA9-202ENST00000616887 SAR1BQ9Y6B6 198 aa12.38□□□□□ -0.43
PCDHGA9-202ENST00000616887 ATXN2Q99700 1313 aaKnown RBP12.38□□□□□ -0.43
PCDHGA9-202ENST00000616887 ADM5C9JUS6 153 aa12.38□□□□□ -0.43
PCDHGA9-202ENST00000616887 PPP1R37O75864 691 aa12.38□□□□□ -0.43
PCDHGA9-202ENST00000616887 MRPS25P82663 173 aaKnown RBP12.38□□□□□ -0.43
PCDHGA9-202ENST00000616887 KLHL30Q0D2K2 578 aa12.38□□□□□ -0.43
PCDHGA9-202ENST00000616887 NFRKBQ6P4R8 1299 aa12.38□□□□□ -0.43
PCDHGA9-202ENST00000616887 CCNI2Q6ZMN8 369 aaPredicted RBP12.38□□□□□ -0.43
PCDHGA9-202ENST00000616887 IQCDQ96DY2 449 aa12.38□□□□□ -0.43
PCDHGA9-202ENST00000616887 CBWD1Q9BRT8 395 aa12.38□□□□□ -0.43
PCDHGA9-202ENST00000616887 SH3BP1Q9Y3L3 701 aa12.38□□□□□ -0.43
PCDHGA9-202ENST00000616887 SERPING1P05155 500 aa12.37□□□□□ -0.43
PCDHGA9-202ENST00000616887 NR3C2P08235 984 aa12.37□□□□□ -0.43
PCDHGA9-202ENST00000616887 COL11A1P12107 1806 aaPredicted RBP12.37□□□□□ -0.43
PCDHGA9-202ENST00000616887 RPL13P26373 211 aaKnown RBP12.37□□□□□ -0.43
PCDHGA9-202ENST00000616887 DSG3P32926 999 aa12.37□□□□□ -0.43
PCDHGA9-202ENST00000616887 GCKP35557 465 aa12.37□□□□□ -0.43
PCDHGA9-202ENST00000616887 GRIK3Q13003 919 aa12.37□□□□□ -0.43
PCDHGA9-202ENST00000616887 SNCBQ16143 134 aa12.37□□□□□ -0.43
PCDHGA9-202ENST00000616887 TREML2Q5T2D2 321 aa12.37□□□□□ -0.43
PCDHGA9-202ENST00000616887 PAPD7Q5XG87 772 aaKnown RBP12.37□□□□□ -0.43
PCDHGA9-202ENST00000616887 ZNF662Q6ZS27 426 aa12.37□□□□□ -0.43
PCDHGA9-202ENST00000616887 MICALCLQ6ZW33 695 aa12.37□□□□□ -0.43
PCDHGA9-202ENST00000616887 ZNF571Q7Z3V5 609 aaPredicted RBP12.37□□□□□ -0.43
PCDHGA9-202ENST00000616887 SYCP3Q8IZU3 236 aa12.37□□□□□ -0.43
PCDHGA9-202ENST00000616887 SPAG5Q96R06 1193 aa12.37□□□□□ -0.43
PCDHGA9-202ENST00000616887 R3HDMLQ9H3Y0 253 aa12.37□□□□□ -0.43
PCDHGA9-202ENST00000616887 GOLPH3Q9H4A6 298 aa12.37□□□□□ -0.43
PCDHGA9-202ENST00000616887 RLFQ13129 1914 aa12.37□□□□□ -0.43
PCDHGA9-202ENST00000616887 SPDYE16A6NNV3 312 aaPredicted RBP12.37□□□□□ -0.43
PCDHGA9-202ENST00000616887 SLC16A4O15374 487 aa12.37□□□□□ -0.43
PCDHGA9-202ENST00000616887 PPP1R12BO60237 982 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms