RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 GSDMDP57764 484 aa19.72■□□□□ 0.75
VRK3-225ENST00000601912 BEX3Q00994 111 aa19.72■□□□□ 0.75
VRK3-225ENST00000601912 LAMTOR4Q0VGL1 99 aa19.72■□□□□ 0.75
VRK3-225ENST00000601912 TRIM32Q13049 653 aa19.72■□□□□ 0.75
VRK3-225ENST00000601912 MKRN4PQ13434 485 aaPredicted RBP19.72■□□□□ 0.75
VRK3-225ENST00000601912 DRP2Q13474 957 aa19.72■□□□□ 0.75
VRK3-225ENST00000601912 CAPSQ13938 189 aa19.72■□□□□ 0.75
VRK3-225ENST00000601912 MFSD10Q14728 455 aa19.72■□□□□ 0.75
VRK3-225ENST00000601912 KIAA0753Q2KHM9 967 aa19.72■□□□□ 0.75
VRK3-225ENST00000601912 VWA3BQ502W6 1294 aa19.72■□□□□ 0.75
VRK3-225ENST00000601912 FKBP15Q5T1M5 1219 aa19.72■□□□□ 0.75
VRK3-225ENST00000601912 C12orf56Q8IXR9 622 aa19.72■□□□□ 0.75
VRK3-225ENST00000601912 TMEM174Q8WUU8 243 aa19.72■□□□□ 0.75
VRK3-225ENST00000601912 MKNK1Q9BUB5 465 aa19.72■□□□□ 0.75
VRK3-225ENST00000601912 IKZF4Q9H2S9 585 aa19.72■□□□□ 0.75
VRK3-225ENST00000601912 ARMCX3Q9UH62 379 aaPredicted RBP19.72■□□□□ 0.75
VRK3-225ENST00000601912 ZEB2O60315 1214 aa19.71■□□□□ 0.75
VRK3-225ENST00000601912 CHMP4BP1P59074 171 aa19.71■□□□□ 0.75
VRK3-225ENST00000601912 MTHFD1LQ6UB35 978 aa19.71■□□□□ 0.75
VRK3-225ENST00000601912 RHPN2Q8IUC4 686 aa19.71■□□□□ 0.75
VRK3-225ENST00000601912 KAT2BQ92831 832 aa19.71■□□□□ 0.75
VRK3-225ENST00000601912 BICD1Q96G01 975 aa19.71■□□□□ 0.75
VRK3-225ENST00000601912 C2orf40Q9H1Z8 148 aa19.71■□□□□ 0.75
VRK3-225ENST00000601912 TMEM134Q9H6X4 195 aa19.71■□□□□ 0.75
VRK3-225ENST00000601912 DMAC2Q9NW81 257 aa19.71■□□□□ 0.75
VRK3-225ENST00000601912 PHLPP2Q6ZVD8 1323 aa19.71■□□□□ 0.75
VRK3-225ENST00000601912 NRCAMQ92823 1304 aa19.71■□□□□ 0.75
VRK3-225ENST00000601912 AKAP3O75969 853 aa19.71■□□□□ 0.75
VRK3-225ENST00000601912 SRGAP2CP0DJJ0 459 aa19.71■□□□□ 0.75
VRK3-225ENST00000601912 PSEN2P49810 448 aa19.71■□□□□ 0.75
VRK3-225ENST00000601912 CYP2J2P51589 502 aa19.71■□□□□ 0.75
VRK3-225ENST00000601912 GNASQ5JWF2 1037 aa19.71■□□□□ 0.75
VRK3-225ENST00000601912 MIIPQ5JXC2 388 aa19.71■□□□□ 0.75
VRK3-225ENST00000601912 ARMCX5Q6P1M9 558 aa19.71■□□□□ 0.75
VRK3-225ENST00000601912 ZBTB8OSQ8IWT0 167 aa19.71■□□□□ 0.75
VRK3-225ENST00000601912 UPF3AQ9H1J1 476 aaKnown RBP19.71■□□□□ 0.75
VRK3-225ENST00000601912 NDST4Q9H3R1 872 aa19.71■□□□□ 0.75
VRK3-225ENST00000601912 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.71■□□□□ 0.75
VRK3-225ENST00000601912 HNRNPDLO14979 420 aaKnown RBP19.7■□□□□ 0.74
VRK3-225ENST00000601912 EXOC3O60645 756 aa19.7■□□□□ 0.74
VRK3-225ENST00000601912 SMIM10L2AP0DMW4 78 aa19.7■□□□□ 0.74
VRK3-225ENST00000601912 SMIM10L2BP0DMW5 78 aa19.7■□□□□ 0.74
VRK3-225ENST00000601912 PBX1P40424 430 aa19.7■□□□□ 0.74
VRK3-225ENST00000601912 CLCN3P51790 818 aa19.7■□□□□ 0.74
VRK3-225ENST00000601912 PPP2R3AQ06190 1150 aa19.7■□□□□ 0.74
VRK3-225ENST00000601912 TRIM59Q8IWR1 403 aa19.7■□□□□ 0.74
VRK3-225ENST00000601912 RNF149Q8NC42 400 aa19.7■□□□□ 0.74
VRK3-225ENST00000601912 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.7■□□□□ 0.74
VRK3-225ENST00000601912 ITIH6Q6UXX5 1313 aa19.7■□□□□ 0.74
VRK3-225ENST00000601912 A0A1W2PQC6 194 aa19.69■□□□□ 0.74
VRK3-225ENST00000601912 HAS3O00219 553 aa19.69■□□□□ 0.74
VRK3-225ENST00000601912 HSPA6P17066 643 aa19.69■□□□□ 0.74
VRK3-225ENST00000601912 CCND3P30281 292 aaPredicted RBP19.69■□□□□ 0.74
VRK3-225ENST00000601912 NKX3-2P78367 333 aa19.69■□□□□ 0.74
VRK3-225ENST00000601912 IRX5P78411 483 aaPredicted RBP19.69■□□□□ 0.74
VRK3-225ENST00000601912 PURAQ00577 322 aaKnown RBP19.69■□□□□ 0.74
VRK3-225ENST00000601912 PTPN21Q16825 1174 aa19.69■□□□□ 0.74
VRK3-225ENST00000601912 FAM186BQ8IYM0 893 aa19.69■□□□□ 0.74
VRK3-225ENST00000601912 SLAIN1Q8ND83 568 aa19.69■□□□□ 0.74
VRK3-225ENST00000601912 MAP7D2Q96T17 732 aa19.69■□□□□ 0.74
VRK3-225ENST00000601912 SETD4Q9NVD3 440 aa19.69■□□□□ 0.74
VRK3-225ENST00000601912 KAT6AQ92794 2004 aa19.69■□□□□ 0.74
VRK3-225ENST00000601912 CASP4P49662 377 aa19.68■□□□□ 0.74
VRK3-225ENST00000601912 LIG4P49917 911 aa19.68■□□□□ 0.74
VRK3-225ENST00000601912 MAP3K21Q5TCX8 1036 aa19.68■□□□□ 0.74
VRK3-225ENST00000601912 CDCA2Q69YH5 1023 aaPredicted RBP19.68■□□□□ 0.74
VRK3-225ENST00000601912 TAS1R3Q7RTX0 852 aa19.68■□□□□ 0.74
VRK3-225ENST00000601912 PPFIBP1Q86W92 1011 aa19.68■□□□□ 0.74
VRK3-225ENST00000601912 LINC01465Q8N7H1 131 aa19.68■□□□□ 0.74
VRK3-225ENST00000601912 XXYLT1Q8NBI6 393 aa19.68■□□□□ 0.74
VRK3-225ENST00000601912 MTG1Q9BT17 334 aaPredicted RBP19.68■□□□□ 0.74
VRK3-225ENST00000601912 XPNPEP3Q9NQH7 507 aa19.68■□□□□ 0.74
VRK3-225ENST00000601912 HSPBP1Q9NZL4 362 aa19.68■□□□□ 0.74
VRK3-225ENST00000601912 AKT3Q9Y243 479 aa19.68■□□□□ 0.74
VRK3-225ENST00000601912 PGK1P00558 417 aa19.68■□□□□ 0.74
VRK3-225ENST00000601912 TPM1P09493 284 aa19.68■□□□□ 0.74
VRK3-225ENST00000601912 POU5F1BQ06416 359 aa19.68■□□□□ 0.74
VRK3-225ENST00000601912 MARCH8Q5T0T0 291 aa19.68■□□□□ 0.74
VRK3-225ENST00000601912 NFRKBQ6P4R8 1299 aa19.68■□□□□ 0.74
VRK3-225ENST00000601912 CCDC150Q8NCX0 1101 aa19.68■□□□□ 0.74
VRK3-225ENST00000601912 LMBR1Q8WVP7 490 aa19.68■□□□□ 0.74
VRK3-225ENST00000601912 ZBTB10Q96DT7 871 aa19.68■□□□□ 0.74
VRK3-225ENST00000601912 NLRP4Q96MN2 994 aa19.68■□□□□ 0.74
VRK3-225ENST00000601912 CBWD1Q9BRT8 395 aa19.68■□□□□ 0.74
VRK3-225ENST00000601912 PCIF1Q9H4Z3 704 aa19.68■□□□□ 0.74
VRK3-225ENST00000601912 MYADML2A6NDP7 307 aa19.67■□□□□ 0.74
VRK3-225ENST00000601912 TISP43B9A030 160 aa19.67■□□□□ 0.74
VRK3-225ENST00000601912 ANKRD63C9JTQ0 380 aa19.67■□□□□ 0.74
VRK3-225ENST00000601912 PIGRP01833 764 aa19.67■□□□□ 0.74
VRK3-225ENST00000601912 GNAT1P11488 350 aa19.67■□□□□ 0.74
VRK3-225ENST00000601912 GARTP22102 1010 aa19.67■□□□□ 0.74
VRK3-225ENST00000601912 TRIM14Q14142 442 aa19.67■□□□□ 0.74
VRK3-225ENST00000601912 MAPK6Q16659 721 aa19.67■□□□□ 0.74
VRK3-225ENST00000601912 SLFN12LQ6IEE8 588 aa19.67■□□□□ 0.74
VRK3-225ENST00000601912 C7orf31Q8N865 590 aa19.67■□□□□ 0.74
VRK3-225ENST00000601912 POMGNT1Q8WZA1 660 aa19.67■□□□□ 0.74
VRK3-225ENST00000601912 NFKBIZQ9BYH8 718 aa19.67■□□□□ 0.74
VRK3-225ENST00000601912 EVPLQ92817 2033 aa19.66■□□□□ 0.74
VRK3-225ENST00000601912 SFPQP23246 707 aaKnown RBP eCLIP19.66■□□□□ 0.74
VRK3-225ENST00000601912 PHKA2P46019 1235 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms