RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 UBXN1Q04323 297 aa11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 STRN3Q13033 797 aa11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 TRIM14Q14142 442 aa11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 TFDP1Q14186 410 aa11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 VWA3BQ502W6 1294 aa11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 GJC2Q5T442 439 aaPredicted RBP11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 TLK2Q86UE8 772 aa11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 PPFIBP1Q86W92 1011 aa11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 CCDC150Q8NCX0 1101 aa11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 PSPC1Q8WXF1 523 aaKnown RBP11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 TMEM143Q96AN5 459 aa11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 IQCDQ96DY2 449 aa11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 C16orf70Q9BSU1 422 aa11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 NUP58Q9BVL2 599 aa11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 C2orf40Q9H1Z8 148 aa11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 RNPEPQ9H4A4 650 aa11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 TMEM134Q9H6X4 195 aa11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 SUGCTQ9HAC7 445 aa11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 DMAC2Q9NW81 257 aa11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 SAGE1Q9NXZ1 904 aa11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 SRRDQ9UH36 339 aa11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 ARMCX3Q9UH62 379 aaPredicted RBP11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 GABRQQ9UN88 632 aa11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 FRMD4BQ9Y2L6 1034 aa11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 DOCK5Q9H7D0 1870 aa11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 ITIH6Q6UXX5 1313 aa11.52□□□□□ -0.57
CHMP1B-202ENST00000588284 WDR81Q562E7 1941 aa11.51□□□□□ -0.57
CHMP1B-202ENST00000588284 GPR25O00155 361 aa11.51□□□□□ -0.57
CHMP1B-202ENST00000588284 KIAA0391O15091 583 aaKnown RBP11.51□□□□□ -0.57
CHMP1B-202ENST00000588284 CLIC2O15247 247 aa11.51□□□□□ -0.57
CHMP1B-202ENST00000588284 TEX33O43247 280 aa11.51□□□□□ -0.57
CHMP1B-202ENST00000588284 ZEB2O60315 1214 aa11.51□□□□□ -0.57
CHMP1B-202ENST00000588284 FKTNO75072 461 aa11.51□□□□□ -0.57
CHMP1B-202ENST00000588284 GLRA2P23416 452 aa11.51□□□□□ -0.57
CHMP1B-202ENST00000588284 KLRC1P26715 233 aa11.51□□□□□ -0.57
CHMP1B-202ENST00000588284 POU5F1BQ06416 359 aa11.51□□□□□ -0.57
CHMP1B-202ENST00000588284 SLFN12LQ6IEE8 588 aa11.51□□□□□ -0.57
CHMP1B-202ENST00000588284 EFCAB12Q6NXP0 572 aa11.51□□□□□ -0.57
CHMP1B-202ENST00000588284 TRIM50Q86XT4 487 aa11.51□□□□□ -0.57
CHMP1B-202ENST00000588284 MAP4K3Q8IVH8 894 aa11.51□□□□□ -0.57
CHMP1B-202ENST00000588284 ZBTB8OSQ8IWT0 167 aa11.51□□□□□ -0.57
CHMP1B-202ENST00000588284 KATNAL1Q9BW62 490 aa11.51□□□□□ -0.57
CHMP1B-202ENST00000588284 ARHGAP39Q9C0H5 1083 aa11.51□□□□□ -0.57
CHMP1B-202ENST00000588284 NDST4Q9H3R1 872 aa11.51□□□□□ -0.57
CHMP1B-202ENST00000588284 AGPAT3Q9NRZ7 376 aa11.51□□□□□ -0.57
CHMP1B-202ENST00000588284 ARHGAP28Q9P2N2 729 aa11.51□□□□□ -0.57
CHMP1B-202ENST00000588284 SUCLA2Q9P2R7 463 aaPredicted RBP11.51□□□□□ -0.57
CHMP1B-202ENST00000588284 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.51□□□□□ -0.57
CHMP1B-202ENST00000588284 LRRIQ4A6NIV6 560 aa11.5□□□□□ -0.57
CHMP1B-202ENST00000588284 MAPK13O15264 365 aa11.5□□□□□ -0.57
CHMP1B-202ENST00000588284 SEPT4O43236 478 aa11.5□□□□□ -0.57
CHMP1B-202ENST00000588284 ADCY3O60266 1144 aa11.5□□□□□ -0.57
CHMP1B-202ENST00000588284 EXOC3O60645 756 aa11.5□□□□□ -0.57
CHMP1B-202ENST00000588284 GARTP22102 1010 aa11.5□□□□□ -0.57
CHMP1B-202ENST00000588284 CNGA1P29973 690 aa11.5□□□□□ -0.57
CHMP1B-202ENST00000588284 PBX1P40424 430 aa11.5□□□□□ -0.57
CHMP1B-202ENST00000588284 PRKCZQ05513 592 aa11.5□□□□□ -0.57
CHMP1B-202ENST00000588284 KCNA1Q09470 495 aa11.5□□□□□ -0.57
CHMP1B-202ENST00000588284 TBX2Q13207 712 aaPredicted RBP11.5□□□□□ -0.57
CHMP1B-202ENST00000588284 CEP135Q66GS9 1140 aa11.5□□□□□ -0.57
CHMP1B-202ENST00000588284 TRIM59Q8IWR1 403 aa11.5□□□□□ -0.57
CHMP1B-202ENST00000588284 XXYLT1Q8NBI6 393 aa11.5□□□□□ -0.57
CHMP1B-202ENST00000588284 PXYLP1Q8TE99 480 aa11.5□□□□□ -0.57
CHMP1B-202ENST00000588284 PRPF31Q8WWY3 499 aaKnown RBP11.5□□□□□ -0.57
CHMP1B-202ENST00000588284 BSNDQ8WZ55 320 aa11.5□□□□□ -0.57
CHMP1B-202ENST00000588284 EEF2KMTQ96G04 330 aa11.5□□□□□ -0.57
CHMP1B-202ENST00000588284 ERGIC2Q96RQ1 377 aa11.5□□□□□ -0.57
CHMP1B-202ENST00000588284 KIAA1586Q9HCI6 787 aa11.5□□□□□ -0.57
CHMP1B-202ENST00000588284 INTS13Q9NVM9 706 aa11.5□□□□□ -0.57
CHMP1B-202ENST00000588284 MYH11P35749 1972 aa11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 DOCK3Q8IZD9 2030 aa11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 ZBTB42B2RXF5 422 aa11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 GNAT1P11488 350 aa11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 CYBAP13498 195 aa11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 KRT13P13646 458 aa11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 PTGS1P23219 599 aa11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 SFPQP23246 707 aaKnown RBP eCLIP11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 SOX10P56693 466 aa11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 GJA9P57773 515 aa11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 NKX3-2P78367 333 aa11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 LAMTOR4Q0VGL1 99 aa11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 PPFIA1Q13136 1202 aa11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 ARMCX5Q6P1M9 558 aa11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 USP37Q86T82 979 aa11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 ZSCAN30Q86W11 494 aa11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 KSR1Q8IVT5 923 aa11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 LRRC8AQ8IWT6 810 aa11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 FAM186BQ8IYM0 893 aa11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 ZNF710Q8N1W2 664 aa11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 METTL13Q8N6R0 699 aa11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 CD99L2Q8TCZ2 262 aa11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 RAET1EQ8TD07 263 aa11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 ASAP3Q8TDY4 903 aa11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 TRIB2Q92519 343 aa11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 CCDC51Q96ER9 411 aa11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 PCMTD1Q96MG8 357 aaPredicted RBP11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 BEGAINQ9BUH8 593 aa11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 EDEM3Q9BZQ6 932 aa11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 ZKSCAN5Q9Y2L8 839 aa11.49□□□□□ -0.57
CHMP1B-202ENST00000588284 NRCAMQ92823 1304 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms