RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 CYFIP1Q7L576 1253 aa16.01■□□□□ 0.15
CCDC43-203ENST00000588210 GUF1Q8N442 669 aaKnown RBP16.01■□□□□ 0.15
CCDC43-203ENST00000588210 GOLGA5Q8TBA6 731 aa16.01■□□□□ 0.15
CCDC43-203ENST00000588210 SECISBP2LQ93073 1101 aaKnown RBP16.01■□□□□ 0.15
CCDC43-203ENST00000588210 EEF2KMTQ96G04 330 aa16.01■□□□□ 0.15
CCDC43-203ENST00000588210 GLT1D1Q96MS3 346 aa16.01■□□□□ 0.15
CCDC43-203ENST00000588210 AGO4Q9HCK5 861 aaKnown RBP16.01■□□□□ 0.15
CCDC43-203ENST00000588210 LRWD1Q9UFC0 647 aa16.01■□□□□ 0.15
CCDC43-203ENST00000588210 FAN1Q9Y2M0 1017 aa16.01■□□□□ 0.15
CCDC43-203ENST00000588210 A0A1W2PQ45 241 aaPredicted RBP16.01■□□□□ 0.15
CCDC43-203ENST00000588210 A0A1W2PQY0 241 aa16.01■□□□□ 0.15
CCDC43-203ENST00000588210 SRGAP2O75044 1071 aa16.01■□□□□ 0.15
CCDC43-203ENST00000588210 N4BP1O75113 896 aaKnown RBP16.01■□□□□ 0.15
CCDC43-203ENST00000588210 LCA5LO95447 670 aa16.01■□□□□ 0.15
CCDC43-203ENST00000588210 FGFR1OPO95684 399 aaKnown RBP16.01■□□□□ 0.15
CCDC43-203ENST00000588210 MMP3P08254 477 aa16.01■□□□□ 0.15
CCDC43-203ENST00000588210 TXKP42681 527 aa16.01■□□□□ 0.15
CCDC43-203ENST00000588210 LRRC63Q05C16 580 aa16.01■□□□□ 0.15
CCDC43-203ENST00000588210 SPA17Q15506 151 aa16.01■□□□□ 0.15
CCDC43-203ENST00000588210 HSDL1Q3SXM5 330 aa16.01■□□□□ 0.15
CCDC43-203ENST00000588210 Q4G0T1 1027 aa16.01■□□□□ 0.15
CCDC43-203ENST00000588210 PPP4R3AQ6IN85 833 aa16.01■□□□□ 0.15
CCDC43-203ENST00000588210 IQCEQ6IPM2 695 aa16.01■□□□□ 0.15
CCDC43-203ENST00000588210 LARP4BQ92615 738 aaKnown RBP16.01■□□□□ 0.15
CCDC43-203ENST00000588210 HPS3Q969F9 1004 aa16.01■□□□□ 0.15
CCDC43-203ENST00000588210 HTATIP2Q9BUP3 242 aa16.01■□□□□ 0.15
CCDC43-203ENST00000588210 SLC39A2Q9NP94 309 aa16.01■□□□□ 0.15
CCDC43-203ENST00000588210 NFASCO94856 1347 aa16.01■□□□□ 0.15
CCDC43-203ENST00000588210 ZNF263O14978 683 aa16■□□□□ 0.15
CCDC43-203ENST00000588210 PPFIA4O75335 1185 aa16■□□□□ 0.15
CCDC43-203ENST00000588210 IDEP14735 1019 aa16■□□□□ 0.15
CCDC43-203ENST00000588210 GCFC2P16383 781 aaKnown RBP16■□□□□ 0.15
CCDC43-203ENST00000588210 ZSCAN26Q16670 478 aa16■□□□□ 0.15
CCDC43-203ENST00000588210 DGKDQ16760 1214 aa16■□□□□ 0.15
CCDC43-203ENST00000588210 LENG9Q96B70 501 aa16■□□□□ 0.15
CCDC43-203ENST00000588210 CCDC42Q96M95 316 aa16■□□□□ 0.15
CCDC43-203ENST00000588210 MBOAT7Q96N66 472 aa16■□□□□ 0.15
CCDC43-203ENST00000588210 RAB34Q9BZG1 259 aa16■□□□□ 0.15
CCDC43-203ENST00000588210 NDST4Q9H3R1 872 aa16■□□□□ 0.15
CCDC43-203ENST00000588210 BCAS3Q9H6U6 928 aa16■□□□□ 0.15
CCDC43-203ENST00000588210 STARD7Q9NQZ5 370 aa16■□□□□ 0.15
CCDC43-203ENST00000588210 TULP2O00295 520 aa15.99■□□□□ 0.15
CCDC43-203ENST00000588210 IPO5O00410 1097 aaKnown RBP15.99■□□□□ 0.15
CCDC43-203ENST00000588210 NOP56O00567 594 aaKnown RBP15.99■□□□□ 0.15
CCDC43-203ENST00000588210 PURAQ00577 322 aaKnown RBP15.99■□□□□ 0.15
CCDC43-203ENST00000588210 CYP27A1Q02318 531 aa15.99■□□□□ 0.15
CCDC43-203ENST00000588210 PDIA5Q14554 519 aa15.99■□□□□ 0.15
CCDC43-203ENST00000588210 TMEM119Q4V9L6 283 aa15.99■□□□□ 0.15
CCDC43-203ENST00000588210 CXCL17Q6UXB2 119 aa15.99■□□□□ 0.15
CCDC43-203ENST00000588210 ZNF572Q7Z3I7 529 aaPredicted RBP15.99■□□□□ 0.15
CCDC43-203ENST00000588210 TRIM58Q8NG06 486 aa15.99■□□□□ 0.15
CCDC43-203ENST00000588210 RAD54LQ92698 747 aa15.99■□□□□ 0.15
CCDC43-203ENST00000588210 CDK5RAP3Q96JB5 506 aa15.99■□□□□ 0.15
CCDC43-203ENST00000588210 CAPZA3Q96KX2 299 aa15.99■□□□□ 0.15
CCDC43-203ENST00000588210 ZNF577Q9BSK1 485 aa15.99■□□□□ 0.15
CCDC43-203ENST00000588210 LRRC27Q9C0I9 530 aa15.99■□□□□ 0.15
CCDC43-203ENST00000588210 PKD2L1Q9P0L9 805 aa15.99■□□□□ 0.15
CCDC43-203ENST00000588210 SLC37A4O43826 429 aa15.99■□□□□ 0.15
CCDC43-203ENST00000588210 SORBS3O60504 671 aa15.99■□□□□ 0.15
CCDC43-203ENST00000588210 USO1O60763 962 aaKnown RBP15.99■□□□□ 0.15
CCDC43-203ENST00000588210 TDP2O95551 362 aa15.99■□□□□ 0.15
CCDC43-203ENST00000588210 MYL3P08590 195 aa15.99■□□□□ 0.15
CCDC43-203ENST00000588210 HOXD8P13378 290 aaPredicted RBP15.99■□□□□ 0.15
CCDC43-203ENST00000588210 ACTN2P35609 894 aa15.99■□□□□ 0.15
CCDC43-203ENST00000588210 EHHADHQ08426 723 aa15.99■□□□□ 0.15
CCDC43-203ENST00000588210 C1orf53Q5VUE5 145 aa15.99■□□□□ 0.15
CCDC43-203ENST00000588210 SLC39A5Q6ZMH5 540 aa15.99■□□□□ 0.15
CCDC43-203ENST00000588210 CAGE1Q8TC20 777 aa15.99■□□□□ 0.15
CCDC43-203ENST00000588210 TBC1D22BQ9NU19 505 aa15.99■□□□□ 0.15
CCDC43-203ENST00000588210 RNF216Q9NWF9 866 aaPredicted RBP15.99■□□□□ 0.15
CCDC43-203ENST00000588210 ARHGAP20Q9P2F6 1191 aa15.99■□□□□ 0.15
CCDC43-203ENST00000588210 JRKLQ9Y4A0 524 aa15.99■□□□□ 0.15
CCDC43-203ENST00000588210 MACROD2A1Z1Q3 448 aa15.98■□□□□ 0.15
CCDC43-203ENST00000588210 KIF11P52732 1056 aa15.98■□□□□ 0.15
CCDC43-203ENST00000588210 ITIH3Q06033 890 aa15.98■□□□□ 0.15
CCDC43-203ENST00000588210 PSMD2Q13200 908 aa15.98■□□□□ 0.15
CCDC43-203ENST00000588210 ITGB3BPQ13352 177 aaPredicted RBP15.98■□□□□ 0.15
CCDC43-203ENST00000588210 LRRC55Q6ZSA7 311 aa15.98■□□□□ 0.15
CCDC43-203ENST00000588210 RUBCNQ92622 972 aa15.98■□□□□ 0.15
CCDC43-203ENST00000588210 VTI1AQ96AJ9 217 aa15.98■□□□□ 0.15
CCDC43-203ENST00000588210 GPR20Q99678 358 aa15.98■□□□□ 0.15
CCDC43-203ENST00000588210 MTG1Q9BT17 334 aaPredicted RBP15.98■□□□□ 0.15
CCDC43-203ENST00000588210 IFIH1Q9BYX4 1025 aaKnown RBP15.98■□□□□ 0.15
CCDC43-203ENST00000588210 JPH1Q9HDC5 661 aaPredicted RBP15.98■□□□□ 0.15
CCDC43-203ENST00000588210 CWC15Q9P013 229 aaKnown RBP15.98■□□□□ 0.15
CCDC43-203ENST00000588210 SLC9A2Q9UBY0 812 aa15.98■□□□□ 0.15
CCDC43-203ENST00000588210 DDX25Q9UHL0 483 aaKnown RBP15.98■□□□□ 0.15
CCDC43-203ENST00000588210 SNX12Q9UMY4 172 aa15.98■□□□□ 0.15
CCDC43-203ENST00000588210 DUSP10Q9Y6W6 482 aa15.98■□□□□ 0.15
CCDC43-203ENST00000588210 PDE2AO00408 941 aaPredicted RBP15.98■□□□□ 0.15
CCDC43-203ENST00000588210 EPHB6O15197 1021 aa15.98■□□□□ 0.15
CCDC43-203ENST00000588210 MSH4O15457 936 aa15.98■□□□□ 0.15
CCDC43-203ENST00000588210 TACC1O75410 805 aa15.98■□□□□ 0.15
CCDC43-203ENST00000588210 RPS6KA5O75582 802 aa15.98■□□□□ 0.15
CCDC43-203ENST00000588210 PLEKP08567 350 aaPredicted RBP15.98■□□□□ 0.15
CCDC43-203ENST00000588210 PRLRP16471 622 aa15.98■□□□□ 0.15
CCDC43-203ENST00000588210 MLLT1Q03111 559 aaPredicted RBP15.98■□□□□ 0.15
CCDC43-203ENST00000588210 SEZ6LQ9BYH1 1024 aa15.98■□□□□ 0.15
CCDC43-203ENST00000588210 EDEM3Q9BZQ6 932 aa15.98■□□□□ 0.15
CCDC43-203ENST00000588210 HPCAL4Q9UM19 191 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms