RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 MCF2L2Q86YR7 1114 aa4.33□□□□□ -1.72
SMARCE1-215ENST00000578995 FBXO16Q8IX29 292 aaPredicted RBP4.33□□□□□ -1.72
SMARCE1-215ENST00000578995 BLIDQ8IZY5 108 aa4.33□□□□□ -1.72
SMARCE1-215ENST00000578995 ANKRD35Q8N283 1001 aa4.33□□□□□ -1.72
SMARCE1-215ENST00000578995 CYP2W1Q8TAV3 490 aa4.33□□□□□ -1.72
SMARCE1-215ENST00000578995 CUL5Q93034 780 aa4.33□□□□□ -1.72
SMARCE1-215ENST00000578995 ABHD8Q96I13 439 aa4.33□□□□□ -1.72
SMARCE1-215ENST00000578995 IWS1Q96ST2 819 aa4.33□□□□□ -1.72
SMARCE1-215ENST00000578995 RMDN3Q96TC7 470 aa4.33□□□□□ -1.72
SMARCE1-215ENST00000578995 ANO3Q9BYT9 981 aa4.33□□□□□ -1.72
SMARCE1-215ENST00000578995 ADAM19Q9H013 955 aa4.33□□□□□ -1.72
SMARCE1-215ENST00000578995 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.33□□□□□ -1.72
SMARCE1-215ENST00000578995 PSTPIP2Q9H939 334 aa4.33□□□□□ -1.72
SMARCE1-215ENST00000578995 FAM53CQ9NYF3 392 aa4.33□□□□□ -1.72
SMARCE1-215ENST00000578995 BIN2Q9UBW5 565 aaPredicted RBP4.33□□□□□ -1.72
SMARCE1-215ENST00000578995 NAP1L2Q9ULW6 460 aaPredicted RBP4.33□□□□□ -1.72
SMARCE1-215ENST00000578995 MTMR6Q9Y217 621 aa4.33□□□□□ -1.72
SMARCE1-215ENST00000578995 SLC5A6Q9Y289 635 aa4.33□□□□□ -1.72
SMARCE1-215ENST00000578995 ZDHHC9Q9Y397 364 aa4.33□□□□□ -1.72
SMARCE1-215ENST00000578995 IVNS1ABPQ9Y6Y0 642 aa4.33□□□□□ -1.72
SMARCE1-215ENST00000578995 NLRC5Q86WI3 1866 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 COL4A6Q14031 1691 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 CYP3A7-CYP3A51PA0A087WV96 503 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 LRRC10BA6NIK2 292 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 ASB14A6NK59 587 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 BTBD18B2RXH4 712 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 MEIS1O00470 390 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 SEPT4O43236 478 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 SLC37A4O43826 429 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 ATP9AO75110 1047 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 TDP2O95551 362 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 FOSP01100 380 aaPredicted RBP4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 GJB1P08034 283 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 SYT1P21579 422 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 UBA1P22314 1058 aaKnown RBP4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 CYP3A7P24462 503 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 CST5P28325 142 aaPredicted RBP4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 ADCYAP1R1P41586 468 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 GJA8P48165 433 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 HMGN5P82970 282 aaKnown RBP4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 ARHGAP4P98171 946 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 GUCY1B3Q02153 619 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 ARHGAP1Q07960 439 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 SPIRE1Q08AE8 756 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 RESTQ13127 1097 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 ITGB3BPQ13352 177 aaPredicted RBP4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 ACVR2BQ13705 512 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 CCDC144BQ3MJ40 725 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 SLC9C1Q4G0N8 1177 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 JAKMIP3Q5VZ66 844 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 GALNT17Q6IS24 598 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 CPLX2Q6PUV4 134 aaKnown RBP4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 MOXD1Q6UVY6 613 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 NIPA1Q7RTP0 329 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 DPP9Q86TI2 863 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 DIS3L2Q8IYB7 885 aaKnown RBP4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 REXO1Q8N1G1 1221 aaKnown RBP4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 C4orf32Q8N8J7 132 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 GLIS3Q8NEA6 775 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 KLHDC9Q8NEP7 349 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 CCDC148Q8NFR7 591 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 ETNPPLQ8TBG4 499 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 RAET1EQ8TD07 263 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 NSUN6Q8TEA1 469 aaKnown RBP4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 COPS5Q92905 334 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 ABHD16BQ9H3Z7 469 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 PRM3Q9NNZ6 103 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 VTA1Q9NP79 307 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 KCNMB3Q9NPA1 279 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 JADE2Q9NQC1 790 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 ADD3Q9UEY8 706 aaKnown RBP4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 DDX20Q9UHI6 824 aaKnown RBP4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 DDX41Q9UJV9 622 aaKnown RBP4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 OGDHLQ9ULD0 1010 aa4.32□□□□□ -1.72
SMARCE1-215ENST00000578995 RALGAPA2Q2PPJ7 1873 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 FNDC1Q4ZHG4 1894 aaPredicted RBP4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 GRIN2DO15399 1336 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 NFASCO94856 1347 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 IGKV6D-21A0A0A0MT36 114 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 TM4SF5O14894 197 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 FSCN2O14926 492 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 DUSP11O75319 330 aaKnown RBP4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 EIF3JO75822 258 aaKnown RBP4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 STAM2O75886 525 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 SGPL1O95470 568 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 CCNE2O96020 404 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 INHBBP09529 407 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 ARP10275 920 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 GNA11P29992 359 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 CCND2P30279 289 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 HOXC8P31273 242 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 KRT2P35908 639 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 IDH3AP50213 366 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 MRPL12P52815 198 aaKnown RBP4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 GJA9P57773 515 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 NLRP5P59047 1200 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 KRTAP1-1Q07627 177 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 ARHGEF6Q15052 776 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 INF2Q27J81 1249 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 Q4G0T1 1027 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms