RNA–Protein interactions for RNA: ENST00000569709.5

RNPS1-225, Transcript of RNA binding protein with serine rich domain 1, human

TSL 4

Gene RNPS1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNPS1-225	ENST00000569709	AVPR2	P30518	371 aa		12.03	□□□□□ -0.48
RNPS1-225	ENST00000569709	RCAN1	P53805	252 aa		12.03	□□□□□ -0.48
RNPS1-225	ENST00000569709	NLRP11	P59045	1033 aa	Known RBP	12.03	□□□□□ -0.48
RNPS1-225	ENST00000569709	ATL3	Q6DD88	541 aa		12.03	□□□□□ -0.48
RNPS1-225	ENST00000569709	TMC7	Q7Z402	723 aa		12.03	□□□□□ -0.48
RNPS1-225	ENST00000569709	BRAP	Q7Z569	592 aa		12.03	□□□□□ -0.48
RNPS1-225	ENST00000569709	ECHDC2	Q86YB7	292 aa		12.03	□□□□□ -0.48
RNPS1-225	ENST00000569709	SMAP1	Q8IYB5	467 aa	Predicted RBP	12.03	□□□□□ -0.48
RNPS1-225	ENST00000569709	TRIM22	Q8IYM9	498 aa		12.03	□□□□□ -0.48
RNPS1-225	ENST00000569709	RNF169	Q8NCN4	708 aa		12.03	□□□□□ -0.48
RNPS1-225	ENST00000569709	FBXO18	Q8NFZ0	1043 aa		12.03	□□□□□ -0.48
RNPS1-225	ENST00000569709	CRYGN	Q8WXF5	182 aa		12.03	□□□□□ -0.48
RNPS1-225	ENST00000569709	WASF1	Q92558	559 aa		12.03	□□□□□ -0.48
RNPS1-225	ENST00000569709	AIFM3	Q96NN9	605 aa		12.03	□□□□□ -0.48
RNPS1-225	ENST00000569709	USP28	Q96RU2	1077 aa		12.03	□□□□□ -0.48
RNPS1-225	ENST00000569709	MAP7D2	Q96T17	732 aa		12.03	□□□□□ -0.48
RNPS1-225	ENST00000569709	TBC1D22B	Q9NU19	505 aa		12.03	□□□□□ -0.48
RNPS1-225	ENST00000569709	SPG21	Q9NZD8	308 aa		12.03	□□□□□ -0.48
RNPS1-225	ENST00000569709	GABBR1	Q9UBS5	961 aa		12.03	□□□□□ -0.48
RNPS1-225	ENST00000569709	CDH22	Q9UJ99	828 aa		12.03	□□□□□ -0.48
RNPS1-225	ENST00000569709	CEP131	Q9UPN4	1083 aa		12.03	□□□□□ -0.48
RNPS1-225	ENST00000569709	NR2E1	Q9Y466	385 aa		12.03	□□□□□ -0.48
RNPS1-225	ENST00000569709	PLXNA3	P51805	1871 aa		12.03	□□□□□ -0.48
RNPS1-225	ENST00000569709	DCHS1	Q96JQ0	3298 aa		12.03	□□□□□ -0.48
RNPS1-225	ENST00000569709	PDGFB	P01127	241 aa	Predicted RBP	12.02	□□□□□ -0.49
RNPS1-225	ENST00000569709	IFNAR1	P17181	557 aa		12.02	□□□□□ -0.49
RNPS1-225	ENST00000569709	EIF4B	P23588	611 aa	Known RBP	12.02	□□□□□ -0.49
RNPS1-225	ENST00000569709	TMOD1	P28289	359 aa		12.02	□□□□□ -0.49
RNPS1-225	ENST00000569709	SMC1A	Q14683	1233 aa	Known RBP	12.02	□□□□□ -0.49
RNPS1-225	ENST00000569709	NTRK3	Q16288	839 aa		12.02	□□□□□ -0.49
RNPS1-225	ENST00000569709	PFKFB3	Q16875	520 aa	Predicted RBP	12.02	□□□□□ -0.49
RNPS1-225	ENST00000569709	PRR16	Q569H4	304 aa		12.02	□□□□□ -0.49
RNPS1-225	ENST00000569709	CLLU1OS	Q5K130	101 aa		12.02	□□□□□ -0.49
RNPS1-225	ENST00000569709	EFCAB12	Q6NXP0	572 aa		12.02	□□□□□ -0.49
RNPS1-225	ENST00000569709	LRRC71	Q8N4P6	559 aa		12.02	□□□□□ -0.49
RNPS1-225	ENST00000569709	KREMEN2	Q8NCW0	462 aa		12.02	□□□□□ -0.49
RNPS1-225	ENST00000569709	CASP10	Q92851	521 aa		12.02	□□□□□ -0.49
RNPS1-225	ENST00000569709	ZNF668	Q96K58	619 aa	Predicted RBP	12.02	□□□□□ -0.49
RNPS1-225	ENST00000569709	FAM167A	Q96KS9	214 aa		12.02	□□□□□ -0.49
RNPS1-225	ENST00000569709	SNX27	Q96L92	541 aa		12.02	□□□□□ -0.49
RNPS1-225	ENST00000569709	SCLT1	Q96NL6	688 aa		12.02	□□□□□ -0.49
RNPS1-225	ENST00000569709	IRF2BPL	Q9H1B7	796 aa		12.02	□□□□□ -0.49
RNPS1-225	ENST00000569709	NUP62CL	Q9H1M0	184 aa		12.02	□□□□□ -0.49
RNPS1-225	ENST00000569709	ADAMTS10	Q9H324	1103 aa		12.02	□□□□□ -0.49
RNPS1-225	ENST00000569709	POMK	Q9H5K3	350 aa		12.02	□□□□□ -0.49
RNPS1-225	ENST00000569709	GJB4	Q9NTQ9	266 aa		12.02	□□□□□ -0.49
RNPS1-225	ENST00000569709	FAM217B	Q9NTX9	383 aa	Predicted RBP	12.02	□□□□□ -0.49
RNPS1-225	ENST00000569709	SAMM50	Q9Y512	469 aa		12.02	□□□□□ -0.49
RNPS1-225	ENST00000569709	PCDHA10	Q9Y5I2	948 aa		12.02	□□□□□ -0.49
RNPS1-225	ENST00000569709	HCFC2	Q9Y5Z7	792 aa		12.02	□□□□□ -0.49
RNPS1-225	ENST00000569709	PTPRZ1	P23471	2315 aa	Predicted RBP	12.02	□□□□□ -0.49
RNPS1-225	ENST00000569709	ADAMTS3	O15072	1205 aa		12.01	□□□□□ -0.49
RNPS1-225	ENST00000569709	LIG1	P18858	919 aa		12.01	□□□□□ -0.49
RNPS1-225	ENST00000569709	CA8	P35219	290 aa		12.01	□□□□□ -0.49
RNPS1-225	ENST00000569709	MTMR3	Q13615	1198 aa		12.01	□□□□□ -0.49
RNPS1-225	ENST00000569709	STK38	Q15208	465 aa		12.01	□□□□□ -0.49
RNPS1-225	ENST00000569709	CES5A	Q6NT32	575 aa		12.01	□□□□□ -0.49
RNPS1-225	ENST00000569709	REXO1	Q8N1G1	1221 aa	Known RBP	12.01	□□□□□ -0.49
RNPS1-225	ENST00000569709	SLC39A11	Q8N1S5	342 aa		12.01	□□□□□ -0.49
RNPS1-225	ENST00000569709	LINC01465	Q8N7H1	131 aa		12.01	□□□□□ -0.49
RNPS1-225	ENST00000569709	MRPL43	Q8N983	215 aa	Known RBP	12.01	□□□□□ -0.49
RNPS1-225	ENST00000569709	ATOH1	Q92858	354 aa	Predicted RBP	12.01	□□□□□ -0.49
RNPS1-225	ENST00000569709	RIPOR3	Q96MK2	946 aa		12.01	□□□□□ -0.49
RNPS1-225	ENST00000569709	NECTIN4	Q96NY8	510 aa		12.01	□□□□□ -0.49
RNPS1-225	ENST00000569709	DDX19A	Q9NUU7	478 aa	Known RBP	12.01	□□□□□ -0.49
RNPS1-225	ENST00000569709	FRYL	O94915	3013 aa		12.01	□□□□□ -0.49
RNPS1-225	ENST00000569709	RIF1	Q5UIP0	2472 aa	Known RBP	12.01	□□□□□ -0.49
RNPS1-225	ENST00000569709	ESYT2	A0FGR8	921 aa		12	□□□□□ -0.49
RNPS1-225	ENST00000569709	C2orf71	A6NGG8	1288 aa		12	□□□□□ -0.49
RNPS1-225	ENST00000569709	WDR64	B1ANS9	1081 aa		12	□□□□□ -0.49
RNPS1-225	ENST00000569709	C2CD4D	B7Z1M9	353 aa		12	□□□□□ -0.49
RNPS1-225	ENST00000569709		H0Y858	1186 aa		12	□□□□□ -0.49
RNPS1-225	ENST00000569709	ZNF862	O60290	1169 aa		12	□□□□□ -0.49
RNPS1-225	ENST00000569709	CLASP2	O75122	1294 aa	Known RBP	12	□□□□□ -0.49
RNPS1-225	ENST00000569709	DEXI	O95424	95 aa		12	□□□□□ -0.49
RNPS1-225	ENST00000569709	OAT	P04181	439 aa		12	□□□□□ -0.49
RNPS1-225	ENST00000569709	DARS	P14868	501 aa	Known RBP	12	□□□□□ -0.49
RNPS1-225	ENST00000569709	FGFR4	P22455	802 aa		12	□□□□□ -0.49
RNPS1-225	ENST00000569709	ME1	P48163	572 aa		12	□□□□□ -0.49
RNPS1-225	ENST00000569709	GPC3	P51654	580 aa		12	□□□□□ -0.49
RNPS1-225	ENST00000569709	AKAP17A	Q02040	695 aa	Known RBP	12	□□□□□ -0.49
RNPS1-225	ENST00000569709	PRKCE	Q02156	737 aa		12	□□□□□ -0.49
RNPS1-225	ENST00000569709	ITIH3	Q06033	890 aa		12	□□□□□ -0.49
RNPS1-225	ENST00000569709	CCDC173	Q0VFZ6	552 aa		12	□□□□□ -0.49
RNPS1-225	ENST00000569709	SF3A1	Q15459	793 aa	Known RBP	12	□□□□□ -0.49
RNPS1-225	ENST00000569709	MCTP2	Q6DN12	878 aa		12	□□□□□ -0.49
RNPS1-225	ENST00000569709	UBALD2	Q8IYN6	164 aa		12	□□□□□ -0.49
RNPS1-225	ENST00000569709	ZNF710	Q8N1W2	664 aa		12	□□□□□ -0.49
RNPS1-225	ENST00000569709	RNF214	Q8ND24	703 aa		12	□□□□□ -0.49
RNPS1-225	ENST00000569709	HELQ	Q8TDG4	1101 aa		12	□□□□□ -0.49
RNPS1-225	ENST00000569709	CCDC12	Q8WUD4	166 aa	Predicted RBP	12	□□□□□ -0.49
RNPS1-225	ENST00000569709	ZMYND12	Q9H0C1	365 aa		12	□□□□□ -0.49
RNPS1-225	ENST00000569709	ADAM7	Q9H2U9	754 aa		12	□□□□□ -0.49
RNPS1-225	ENST00000569709	C6orf50	Q9HD87	102 aa		12	□□□□□ -0.49
RNPS1-225	ENST00000569709	RCOR1	Q9UKL0	485 aa		12	□□□□□ -0.49
RNPS1-225	ENST00000569709	SORCS3	Q9UPU3	1222 aa		12	□□□□□ -0.49
RNPS1-225	ENST00000569709	DENND4A	Q7Z401	1863 aa		12	□□□□□ -0.49
RNPS1-225	ENST00000569709	FAM186A	A6NE01	2351 aa		11.99	□□□□□ -0.49
RNPS1-225	ENST00000569709		A0A0U1RQF3	1178 aa		11.99	□□□□□ -0.49
RNPS1-225	ENST00000569709	NT5C1B-RDH14	C9J2C7	533 aa		11.99	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms