RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.34□□□□□ -0.75
CAPN3-219ENST00000569136 PCDHA2Q9Y5H9 948 aa10.34□□□□□ -0.75
CAPN3-219ENST00000569136 SLC4A7Q9Y6M7 1214 aa10.34□□□□□ -0.75
CAPN3-219ENST00000569136 SERTM1A2A2V5 107 aa10.33□□□□□ -0.76
CAPN3-219ENST00000569136 TDP2O95551 362 aa10.33□□□□□ -0.76
CAPN3-219ENST00000569136 MARK3P27448 753 aa10.33□□□□□ -0.76
CAPN3-219ENST00000569136 TRAPPC10P48553 1259 aa10.33□□□□□ -0.76
CAPN3-219ENST00000569136 PSMA6P60900 246 aaKnown RBP10.33□□□□□ -0.76
CAPN3-219ENST00000569136 CDC42EP1Q00587 391 aa10.33□□□□□ -0.76
CAPN3-219ENST00000569136 ST3GAL1Q11201 340 aa10.33□□□□□ -0.76
CAPN3-219ENST00000569136 ORC2Q13416 577 aaPredicted RBP10.33□□□□□ -0.76
CAPN3-219ENST00000569136 GNL2Q13823 731 aaKnown RBP10.33□□□□□ -0.76
CAPN3-219ENST00000569136 IKBKEQ14164 716 aa10.33□□□□□ -0.76
CAPN3-219ENST00000569136 ZNF618Q5T7W0 954 aa10.33□□□□□ -0.76
CAPN3-219ENST00000569136 OTOP2Q7RTS6 562 aa10.33□□□□□ -0.76
CAPN3-219ENST00000569136 MIER3Q7Z3K6 550 aa10.33□□□□□ -0.76
CAPN3-219ENST00000569136 DEFB128Q7Z7B8 93 aa10.33□□□□□ -0.76
CAPN3-219ENST00000569136 CKAP2LQ8IYA6 745 aa10.33□□□□□ -0.76
CAPN3-219ENST00000569136 EXOC8Q8IYI6 725 aa10.33□□□□□ -0.76
CAPN3-219ENST00000569136 ETNPPLQ8TBG4 499 aa10.33□□□□□ -0.76
CAPN3-219ENST00000569136 TNFRSF25Q93038 417 aa10.33□□□□□ -0.76
CAPN3-219ENST00000569136 KCNMB3Q9NPA1 279 aa10.33□□□□□ -0.76
CAPN3-219ENST00000569136 GJB4Q9NTQ9 266 aa10.33□□□□□ -0.76
CAPN3-219ENST00000569136 TUBE1Q9UJT0 475 aa10.33□□□□□ -0.76
CAPN3-219ENST00000569136 SQORQ9Y6N5 450 aa10.33□□□□□ -0.76
CAPN3-219ENST00000569136 SCN10AQ9Y5Y9 1956 aa10.32□□□□□ -0.76
CAPN3-219ENST00000569136 TMEM265A0A087WTH1 108 aa10.32□□□□□ -0.76
CAPN3-219ENST00000569136 SMIM35A0A1B0GVV1 85 aa10.32□□□□□ -0.76
CAPN3-219ENST00000569136 KIF28PB7ZC32 967 aa10.32□□□□□ -0.76
CAPN3-219ENST00000569136 SOX1O00570 391 aaPredicted RBP10.32□□□□□ -0.76
CAPN3-219ENST00000569136 KLRC1P26715 233 aa10.32□□□□□ -0.76
CAPN3-219ENST00000569136 TMOD1P28289 359 aa10.32□□□□□ -0.76
CAPN3-219ENST00000569136 NOS2P35228 1153 aa10.32□□□□□ -0.76
CAPN3-219ENST00000569136 PPP2R5CQ13362 524 aa10.32□□□□□ -0.76
CAPN3-219ENST00000569136 RAB30Q15771 203 aa10.32□□□□□ -0.76
CAPN3-219ENST00000569136 WDR44Q5JSH3 913 aa10.32□□□□□ -0.76
CAPN3-219ENST00000569136 MARCH8Q5T0T0 291 aa10.32□□□□□ -0.76
CAPN3-219ENST00000569136 CNKSR3Q6P9H4 555 aa10.32□□□□□ -0.76
CAPN3-219ENST00000569136 MTHFD1LQ6UB35 978 aa10.32□□□□□ -0.76
CAPN3-219ENST00000569136 B3GNT9Q6UX72 402 aa10.32□□□□□ -0.76
CAPN3-219ENST00000569136 USP38Q8NB14 1042 aa10.32□□□□□ -0.76
CAPN3-219ENST00000569136 SEPT8Q92599 483 aa10.32□□□□□ -0.76
CAPN3-219ENST00000569136 UIMC1Q96RL1 719 aa10.32□□□□□ -0.76
CAPN3-219ENST00000569136 GABBR1Q9UBS5 961 aa10.32□□□□□ -0.76
CAPN3-219ENST00000569136 MSRAQ9UJ68 235 aa10.32□□□□□ -0.76
CAPN3-219ENST00000569136 LCTP09848 1927 aa10.31□□□□□ -0.76
CAPN3-219ENST00000569136 MYH6P13533 1939 aa10.31□□□□□ -0.76
CAPN3-219ENST00000569136 COL1A2P08123 1366 aa10.31□□□□□ -0.76
CAPN3-219ENST00000569136 A0A1B0GTH6 734 aa10.31□□□□□ -0.76
CAPN3-219ENST00000569136 SLC35F4A4IF30 521 aa10.31□□□□□ -0.76
CAPN3-219ENST00000569136 M0QZ92 97 aa10.31□□□□□ -0.76
CAPN3-219ENST00000569136 NBNO60934 754 aa10.31□□□□□ -0.76
CAPN3-219ENST00000569136 P4HBP07237 508 aaKnown RBP10.31□□□□□ -0.76
CAPN3-219ENST00000569136 ATP2A2P16615 1042 aaKnown RBP10.31□□□□□ -0.76
CAPN3-219ENST00000569136 U2AF2P26368 475 aaKnown RBP eCLIP10.31□□□□□ -0.76
CAPN3-219ENST00000569136 KCNJ6P48051 423 aa10.31□□□□□ -0.76
CAPN3-219ENST00000569136 PSMC5P62195 406 aa10.31□□□□□ -0.76
CAPN3-219ENST00000569136 IGBP1P78318 339 aa10.31□□□□□ -0.76
CAPN3-219ENST00000569136 GPNMBQ14956 572 aa10.31□□□□□ -0.76
CAPN3-219ENST00000569136 EPHA7Q15375 998 aa10.31□□□□□ -0.76
CAPN3-219ENST00000569136 TEAD4Q15561 434 aa10.31□□□□□ -0.76
CAPN3-219ENST00000569136 XKR3Q5GH77 459 aa10.31□□□□□ -0.76
CAPN3-219ENST00000569136 CCDC60Q8IWA6 550 aaPredicted RBP10.31□□□□□ -0.76
CAPN3-219ENST00000569136 DEFB123Q8N688 67 aa10.31□□□□□ -0.76
CAPN3-219ENST00000569136 HAS1Q92839 578 aa10.31□□□□□ -0.76
CAPN3-219ENST00000569136 APBB2Q92870 758 aa10.31□□□□□ -0.76
CAPN3-219ENST00000569136 VWCEQ96DN2 955 aa10.31□□□□□ -0.76
CAPN3-219ENST00000569136 UNC45AQ9H3U1 944 aa10.31□□□□□ -0.76
CAPN3-219ENST00000569136 NXF1Q9UBU9 619 aaKnown RBP10.31□□□□□ -0.76
CAPN3-219ENST00000569136 PCDHA12Q9UN75 941 aa10.31□□□□□ -0.76
CAPN3-219ENST00000569136 SMC3Q9UQE7 1217 aa10.31□□□□□ -0.76
CAPN3-219ENST00000569136 DYRK1BQ9Y463 629 aa10.31□□□□□ -0.76
CAPN3-219ENST00000569136 PPME1Q9Y570 386 aa10.31□□□□□ -0.76
CAPN3-219ENST00000569136 LAMA3Q16787 3333 aa10.3□□□□□ -0.76
CAPN3-219ENST00000569136 SLC37A4O43826 429 aa10.3□□□□□ -0.76
CAPN3-219ENST00000569136 DTNBO60941 627 aa10.3□□□□□ -0.76
CAPN3-219ENST00000569136 CHRNA1P02708 482 aa10.3□□□□□ -0.76
CAPN3-219ENST00000569136 ATP4AP20648 1035 aa10.3□□□□□ -0.76
CAPN3-219ENST00000569136 IGFBP4P22692 258 aa10.3□□□□□ -0.76
CAPN3-219ENST00000569136 QARSP47897 775 aaKnown RBP10.3□□□□□ -0.76
CAPN3-219ENST00000569136 CALCRLQ16602 461 aa10.3□□□□□ -0.76
CAPN3-219ENST00000569136 PLEKHG4Q58EX7 1191 aa10.3□□□□□ -0.76
CAPN3-219ENST00000569136 EARS2Q5JPH6 523 aaKnown RBP10.3□□□□□ -0.76
CAPN3-219ENST00000569136 ODR4Q5SWX8 454 aa10.3□□□□□ -0.76
CAPN3-219ENST00000569136 OTUD6AQ7L8S5 288 aa10.3□□□□□ -0.76
CAPN3-219ENST00000569136 NOSTRINQ8IVI9 506 aa10.3□□□□□ -0.76
CAPN3-219ENST00000569136 KIAA0319LQ8IZA0 1049 aa10.3□□□□□ -0.76
CAPN3-219ENST00000569136 PGBD3Q8N328 593 aa10.3□□□□□ -0.76
CAPN3-219ENST00000569136 ZDHHC1Q8WTX9 485 aa10.3□□□□□ -0.76
CAPN3-219ENST00000569136 DNAJB3Q8WWF6 145 aa10.3□□□□□ -0.76
CAPN3-219ENST00000569136 WNT8BQ93098 351 aa10.3□□□□□ -0.76
CAPN3-219ENST00000569136 SLC9A7Q96T83 725 aa10.3□□□□□ -0.76
CAPN3-219ENST00000569136 JPH2Q9BR39 696 aaPredicted RBP10.3□□□□□ -0.76
CAPN3-219ENST00000569136 SEMA6BQ9H3T3 888 aa10.3□□□□□ -0.76
CAPN3-219ENST00000569136 CXXC1Q9P0U4 656 aaPredicted RBP10.3□□□□□ -0.76
CAPN3-219ENST00000569136 NOL7Q9UMY1 257 aaKnown RBP10.3□□□□□ -0.76
CAPN3-219ENST00000569136 HCN4Q9Y3Q4 1203 aa10.3□□□□□ -0.76
CAPN3-219ENST00000569136 LRRC37A2A6NM11 1700 aa10.3□□□□□ -0.76
CAPN3-219ENST00000569136 CDC14CA4D256 554 aa10.29□□□□□ -0.76
CAPN3-219ENST00000569136 H3BQV1 296 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms