RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 PRRT2Q7Z6L0 340 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-241ENST00000556374 METTL16Q86W50 562 aaKnown RBP5.08□□□□□ -1.6
ATXN3-241ENST00000556374 LINC00482Q8N8I6 264 aa5.08□□□□□ -1.6
ATXN3-241ENST00000556374 ALG3Q92685 438 aa5.08□□□□□ -1.6
ATXN3-241ENST00000556374 CHAMP1Q96JM3 812 aa5.08□□□□□ -1.6
ATXN3-241ENST00000556374 PKNOX2Q96KN3 472 aa5.08□□□□□ -1.6
ATXN3-241ENST00000556374 NBPF4Q96M43 638 aa5.08□□□□□ -1.6
ATXN3-241ENST00000556374 ZDHHC15Q96MV8 337 aa5.08□□□□□ -1.6
ATXN3-241ENST00000556374 NEK1Q96PY6 1258 aa5.08□□□□□ -1.6
ATXN3-241ENST00000556374 DNAJC2Q99543 621 aaKnown RBP5.08□□□□□ -1.6
ATXN3-241ENST00000556374 MTA3Q9BTC8 594 aa5.08□□□□□ -1.6
ATXN3-241ENST00000556374 NAT10Q9H0A0 1025 aaKnown RBP5.08□□□□□ -1.6
ATXN3-241ENST00000556374 CCDC8Q9H0W5 538 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-241ENST00000556374 SIL1Q9H173 461 aa5.08□□□□□ -1.6
ATXN3-241ENST00000556374 ALDH8A1Q9H2A2 487 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-241ENST00000556374 BOLA2Q9H3K6 86 aa5.08□□□□□ -1.6
ATXN3-241ENST00000556374 CLSTN2Q9H4D0 955 aa5.08□□□□□ -1.6
ATXN3-241ENST00000556374 BICC1Q9H694 974 aaKnown RBP5.08□□□□□ -1.6
ATXN3-241ENST00000556374 NGRNQ9NPE2 291 aaKnown RBP5.08□□□□□ -1.6
ATXN3-241ENST00000556374 CGGBP1Q9UFW8 167 aaPredicted RBP5.08□□□□□ -1.6
ATXN3-241ENST00000556374 PCDHGB7Q9Y5F8 929 aa5.08□□□□□ -1.6
ATXN3-241ENST00000556374 FER1L6Q2WGJ9 1857 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 COL15A1P39059 1388 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 SH3TC1Q8TE82 1336 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 A0A0D9SFI3 127 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 FAM86C2PA6NEL3 165 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 GLTPD2A6NH11 291 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 BECN2A8MW95 431 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 NPHS1O60500 1241 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 NEMFO60524 1076 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 KINO60870 393 aaKnown RBP5.07□□□□□ -1.6
ATXN3-241ENST00000556374 PLA2G1BP04054 148 aaKnown RBP5.07□□□□□ -1.6
ATXN3-241ENST00000556374 MYL6BP14649 208 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 CPA1P15085 419 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 HMGB2P26583 209 aaKnown RBP5.07□□□□□ -1.6
ATXN3-241ENST00000556374 NFKB2Q00653 900 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 DLX2Q07687 328 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-241ENST00000556374 CACNB2Q08289 660 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-241ENST00000556374 STK3Q13188 491 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 NECTIN1Q15223 517 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 STX1AQ16623 288 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 ME3Q16798 604 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 ADCK5Q3MIX3 580 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 ATL3Q6DD88 541 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 TICAM2Q86XR7 235 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 NECAB1Q8N987 351 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 SPC24Q8NBT2 197 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 COPS5Q92905 334 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 MAP4K1Q92918 833 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 GTF3C6Q969F1 213 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 FAM227BQ96M60 508 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 MYD88Q99836 296 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 LLPHQ9BRT6 129 aaKnown RBP5.07□□□□□ -1.6
ATXN3-241ENST00000556374 IL25Q9H293 177 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 TTC12Q9H892 705 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-241ENST00000556374 SPTLC3Q9NUV7 552 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 TPCN1Q9ULQ1 816 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 NAP1L2Q9ULW6 460 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-241ENST00000556374 PA2G4Q9UQ80 394 aaKnown RBP5.07□□□□□ -1.6
ATXN3-241ENST00000556374 EFR3BQ9Y2G0 817 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 ZNF831Q5JPB2 1677 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 TRPM7Q96QT4 1865 aa5.07□□□□□ -1.6
ATXN3-241ENST00000556374 ZNF609O15014 1411 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 PASKQ96RG2 1323 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 NPHP3-ACAD11A0A0J9YXS1 232 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 KCNQ3O43525 872 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 EPHX1P07099 455 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 ATP5JP18859 108 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 LIMS1P48059 325 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 MAP2K1Q02750 393 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-241ENST00000556374 GCKRQ14397 625 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 VMACQ2NL98 169 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 MCMDC2Q4G0Z9 681 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 ANO6Q4KMQ2 910 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 TNNI3KQ59H18 835 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 WWC2Q6AWC2 1192 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 NAA16Q6N069 864 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-241ENST00000556374 TTLL7Q6ZT98 887 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 ADAT2Q7Z6V5 191 aaKnown RBP5.06□□□□□ -1.6
ATXN3-241ENST00000556374 FERMT3Q86UX7 667 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 DCP2Q8IU60 420 aaKnown RBP5.06□□□□□ -1.6
ATXN3-241ENST00000556374 SMAP1Q8IYB5 467 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-241ENST00000556374 CEP57L1Q8IYX8 460 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 CARFQ8N187 725 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 LEO1Q8WVC0 666 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-241ENST00000556374 KLHL6Q8WZ60 621 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 SHDQ96IW2 340 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 MCMBPQ9BTE3 642 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 FUCA2Q9BTY2 467 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 CCDC94Q9BW85 323 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-241ENST00000556374 TRIM5Q9C035 493 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 SLC52A2Q9HAB3 445 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 ANO10Q9NW15 660 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 DACT1Q9NYF0 836 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 NTMQ9P121 344 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 CLIP2Q9UDT6 1046 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 MYRFQ9Y2G1 1151 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 FPGT-TNNI3KV9GXZ4 949 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 CACNA1SQ13698 1873 aa5.06□□□□□ -1.6
ATXN3-241ENST00000556374 HEG1Q9ULI3 1381 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms