RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 H2AFB1P0C5Y9 115 aa8.01□□□□□ -1.13
ATXN3-236ENST00000556220 H2AFB2P0C5Z0 115 aa8.01□□□□□ -1.13
ATXN3-236ENST00000556220 TARSP26639 723 aaKnown RBP8.01□□□□□ -1.13
ATXN3-236ENST00000556220 HOXC8P31273 242 aa8.01□□□□□ -1.13
ATXN3-236ENST00000556220 PPARAQ07869 468 aa8.01□□□□□ -1.13
ATXN3-236ENST00000556220 BTG3Q14201 252 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-236ENST00000556220 UBALD2Q8IYN6 164 aa8.01□□□□□ -1.13
ATXN3-236ENST00000556220 KBTBD3Q8NAB2 608 aa8.01□□□□□ -1.13
ATXN3-236ENST00000556220 KREMEN2Q8NCW0 462 aa8.01□□□□□ -1.13
ATXN3-236ENST00000556220 SYTL5Q8TDW5 730 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-236ENST00000556220 ATP8B4Q8TF62 1192 aa8.01□□□□□ -1.13
ATXN3-236ENST00000556220 POF1BQ8WVV4 589 aa8.01□□□□□ -1.13
ATXN3-236ENST00000556220 TBC1D5Q92609 795 aa8.01□□□□□ -1.13
ATXN3-236ENST00000556220 TTC9Q92623 222 aa8.01□□□□□ -1.13
ATXN3-236ENST00000556220 IFT43Q96FT9 208 aa8.01□□□□□ -1.13
ATXN3-236ENST00000556220 C16orf70Q9BSU1 422 aa8.01□□□□□ -1.13
ATXN3-236ENST00000556220 RNPEPQ9H4A4 650 aa8.01□□□□□ -1.13
ATXN3-236ENST00000556220 DMXL1Q9Y485 3027 aa8.01□□□□□ -1.13
ATXN3-236ENST00000556220 LCTP09848 1927 aa8.01□□□□□ -1.13
ATXN3-236ENST00000556220 MYH4Q9Y623 1939 aa8.01□□□□□ -1.13
ATXN3-236ENST00000556220 FRMPD2Q68DX3 1309 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-236ENST00000556220 KMT2EQ8IZD2 1858 aa8□□□□□ -1.13
ATXN3-236ENST00000556220 CFAP47Q6ZTR5 3102 aa8□□□□□ -1.13
ATXN3-236ENST00000556220 M0R2C6 588 aa8□□□□□ -1.13
ATXN3-236ENST00000556220 DGKIO75912 1065 aa8□□□□□ -1.13
ATXN3-236ENST00000556220 ZFYP08048 801 aaPredicted RBP8□□□□□ -1.13
ATXN3-236ENST00000556220 SMIM10L2AP0DMW4 78 aa8□□□□□ -1.13
ATXN3-236ENST00000556220 SMIM10L2BP0DMW5 78 aa8□□□□□ -1.13
ATXN3-236ENST00000556220 RARAP10276 462 aa8□□□□□ -1.13
ATXN3-236ENST00000556220 CPB1P15086 417 aa8□□□□□ -1.13
ATXN3-236ENST00000556220 RFX1P22670 979 aa8□□□□□ -1.13
ATXN3-236ENST00000556220 GPLD1P80108 840 aa8□□□□□ -1.13
ATXN3-236ENST00000556220 HSDL1Q3SXM5 330 aa8□□□□□ -1.13
ATXN3-236ENST00000556220 FAM26DQ5JW98 314 aa8□□□□□ -1.13
ATXN3-236ENST00000556220 CELF3Q5SZQ8 465 aaKnown RBP8□□□□□ -1.13
ATXN3-236ENST00000556220 KLHL23Q8NBE8 558 aa8□□□□□ -1.13
ATXN3-236ENST00000556220 SPATA33Q96N06 139 aa8□□□□□ -1.13
ATXN3-236ENST00000556220 RMDN3Q96TC7 470 aa8□□□□□ -1.13
ATXN3-236ENST00000556220 LPIN3Q9BQK8 851 aa8□□□□□ -1.13
ATXN3-236ENST00000556220 NAPBQ9H115 298 aa8□□□□□ -1.13
ATXN3-236ENST00000556220 S1PR5Q9H228 398 aa8□□□□□ -1.13
ATXN3-236ENST00000556220 TLE6Q9H808 572 aa8□□□□□ -1.13
ATXN3-236ENST00000556220 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8□□□□□ -1.13
ATXN3-236ENST00000556220 PCDHGC5Q9Y5F6 944 aa8□□□□□ -1.13
ATXN3-236ENST00000556220 MRVI1Q9Y6F6 885 aa8□□□□□ -1.13
ATXN3-236ENST00000556220 GPR179Q6PRD1 2367 aa8□□□□□ -1.13
ATXN3-236ENST00000556220 ATRXP46100 2492 aa8□□□□□ -1.13
ATXN3-236ENST00000556220 ZBTB42B2RXF5 422 aa7.99□□□□□ -1.13
ATXN3-236ENST00000556220 H3BRB1 525 aa7.99□□□□□ -1.13
ATXN3-236ENST00000556220 OPLAHO14841 1288 aa7.99□□□□□ -1.13
ATXN3-236ENST00000556220 PER2O15055 1255 aa7.99□□□□□ -1.13
ATXN3-236ENST00000556220 RANBP6O60518 1105 aaKnown RBP7.99□□□□□ -1.13
ATXN3-236ENST00000556220 HMMRO75330 724 aa7.99□□□□□ -1.13
ATXN3-236ENST00000556220 SASH3O75995 380 aa7.99□□□□□ -1.13
ATXN3-236ENST00000556220 BRD1O95696 1058 aa7.99□□□□□ -1.13
ATXN3-236ENST00000556220 PDHBP11177 359 aa7.99□□□□□ -1.13
ATXN3-236ENST00000556220 TOP1P11387 765 aaKnown RBP7.99□□□□□ -1.13
ATXN3-236ENST00000556220 GNAT1P11488 350 aa7.99□□□□□ -1.13
ATXN3-236ENST00000556220 CLCN5P51795 746 aa7.99□□□□□ -1.13
ATXN3-236ENST00000556220 MTMR3Q13615 1198 aa7.99□□□□□ -1.13
ATXN3-236ENST00000556220 PUM1Q14671 1186 aaKnown RBP eCLIP7.99□□□□□ -1.13
ATXN3-236ENST00000556220 PERM1Q5SV97 790 aa7.99□□□□□ -1.13
ATXN3-236ENST00000556220 ARHGEF16Q5VV41 709 aa7.99□□□□□ -1.13
ATXN3-236ENST00000556220 ELMSAN1Q6PJG2 1045 aa7.99□□□□□ -1.13
ATXN3-236ENST00000556220 KRT25Q7Z3Z0 450 aa7.99□□□□□ -1.13
ATXN3-236ENST00000556220 SIRT2Q8IXJ6 389 aa7.99□□□□□ -1.13
ATXN3-236ENST00000556220 CMTR2Q8IYT2 770 aaKnown RBP7.99□□□□□ -1.13
ATXN3-236ENST00000556220 NEK1Q96PY6 1258 aa7.99□□□□□ -1.13
ATXN3-236ENST00000556220 CDCA3Q99618 268 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-236ENST00000556220 TMEM47Q9BQJ4 181 aa7.99□□□□□ -1.13
ATXN3-236ENST00000556220 TUT1Q9H6E5 874 aaKnown RBP7.99□□□□□ -1.13
ATXN3-236ENST00000556220 COL20A1Q9P218 1284 aa7.99□□□□□ -1.13
ATXN3-236ENST00000556220 SORCS3Q9UPU3 1222 aa7.99□□□□□ -1.13
ATXN3-236ENST00000556220 MRPL42Q9Y6G3 142 aaKnown RBP7.99□□□□□ -1.13
ATXN3-236ENST00000556220 KMT2BQ9UMN6 2715 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-236ENST00000556220 OTOGLQ3ZCN5 2332 aa7.98□□□□□ -1.13
ATXN3-236ENST00000556220 MYO10Q9HD67 2058 aa7.98□□□□□ -1.13
ATXN3-236ENST00000556220 FSD2A1L4K1 749 aa7.98□□□□□ -1.13
ATXN3-236ENST00000556220 SORBS3O60504 671 aa7.98□□□□□ -1.13
ATXN3-236ENST00000556220 GGPS1O95749 300 aa7.98□□□□□ -1.13
ATXN3-236ENST00000556220 CHRNA1P02708 482 aa7.98□□□□□ -1.13
ATXN3-236ENST00000556220 TGFB3P10600 412 aa7.98□□□□□ -1.13
ATXN3-236ENST00000556220 EIF2AK2P19525 551 aaKnown RBP7.98□□□□□ -1.13
ATXN3-236ENST00000556220 ADAM17P78536 824 aa7.98□□□□□ -1.13
ATXN3-236ENST00000556220 RBM10P98175 930 aaKnown RBP7.98□□□□□ -1.13
ATXN3-236ENST00000556220 SP2Q02086 613 aa7.98□□□□□ -1.13
ATXN3-236ENST00000556220 ZNF543Q08ER8 600 aa7.98□□□□□ -1.13
ATXN3-236ENST00000556220 DUSP6Q16828 381 aa7.98□□□□□ -1.13
ATXN3-236ENST00000556220 SWI5Q1ZZU3 235 aa7.98□□□□□ -1.13
ATXN3-236ENST00000556220 USH1GQ495M9 461 aa7.98□□□□□ -1.13
ATXN3-236ENST00000556220 KCNV1Q6PIU1 500 aa7.98□□□□□ -1.13
ATXN3-236ENST00000556220 SHISA2Q6UWI4 295 aa7.98□□□□□ -1.13
ATXN3-236ENST00000556220 TMEM184AQ6ZMB5 413 aa7.98□□□□□ -1.13
ATXN3-236ENST00000556220 MCF2L2Q86YR7 1114 aa7.98□□□□□ -1.13
ATXN3-236ENST00000556220 VN1R2Q8NFZ6 395 aa7.98□□□□□ -1.13
ATXN3-236ENST00000556220 MICAL1Q8TDZ2 1067 aa7.98□□□□□ -1.13
ATXN3-236ENST00000556220 SEMA4AQ9H3S1 761 aa7.98□□□□□ -1.13
ATXN3-236ENST00000556220 EHMT1Q9H9B1 1298 aa7.98□□□□□ -1.13
ATXN3-236ENST00000556220 SETD4Q9NVD3 440 aa7.98□□□□□ -1.13
ATXN3-236ENST00000556220 LRFN2Q9ULH4 789 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms