RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 MYH9P35579 1960 aaKnown RBP13.92□□□□□ -0.18
PRKDC-207ENST00000536483 ZDBF2Q9HCK1 2354 aa13.92□□□□□ -0.18
PRKDC-207ENST00000536483 WNT7AO00755 349 aa13.92□□□□□ -0.18
PRKDC-207ENST00000536483 HOXA2O43364 376 aa13.92□□□□□ -0.18
PRKDC-207ENST00000536483 NEMFO60524 1076 aa13.92□□□□□ -0.18
PRKDC-207ENST00000536483 SLITRK3O94933 977 aa13.92□□□□□ -0.18
PRKDC-207ENST00000536483 SRGAP2BP0DMP2 458 aa13.92□□□□□ -0.18
PRKDC-207ENST00000536483 TBC1D8BQ0IIM8 1120 aa13.92□□□□□ -0.18
PRKDC-207ENST00000536483 ANKRD54Q6NXT1 300 aa13.92□□□□□ -0.18
PRKDC-207ENST00000536483 SYCE2Q6PIF2 218 aa13.92□□□□□ -0.18
PRKDC-207ENST00000536483 TMEM184AQ6ZMB5 413 aa13.92□□□□□ -0.18
PRKDC-207ENST00000536483 ECHDC2Q86YB7 292 aa13.92□□□□□ -0.18
PRKDC-207ENST00000536483 NOSTRINQ8IVI9 506 aa13.92□□□□□ -0.18
PRKDC-207ENST00000536483 SUGP1Q8IWZ8 645 aaKnown RBP13.92□□□□□ -0.18
PRKDC-207ENST00000536483 LRRC43Q8N309 656 aa13.92□□□□□ -0.18
PRKDC-207ENST00000536483 RNF169Q8NCN4 708 aa13.92□□□□□ -0.18
PRKDC-207ENST00000536483 TMX3Q96JJ7 454 aa13.92□□□□□ -0.18
PRKDC-207ENST00000536483 ZNF558Q96NG5 402 aa13.92□□□□□ -0.18
PRKDC-207ENST00000536483 PHOX2BQ99453 314 aa13.92□□□□□ -0.18
PRKDC-207ENST00000536483 JPH2Q9BR39 696 aaPredicted RBP13.92□□□□□ -0.18
PRKDC-207ENST00000536483 DHX33Q9H6R0 707 aaKnown RBP13.92□□□□□ -0.18
PRKDC-207ENST00000536483 ZSWIM4Q9H7M6 989 aa13.92□□□□□ -0.18
PRKDC-207ENST00000536483 NGRNQ9NPE2 291 aaKnown RBP13.92□□□□□ -0.18
PRKDC-207ENST00000536483 WRAP73Q9P2S5 460 aaPredicted RBP13.92□□□□□ -0.18
PRKDC-207ENST00000536483 CD2BP2O95400 341 aaKnown RBP13.91□□□□□ -0.18
PRKDC-207ENST00000536483 XRCC6P12956 609 aaKnown RBP eCLIP13.91□□□□□ -0.18
PRKDC-207ENST00000536483 FGFR4P22455 802 aa13.91□□□□□ -0.18
PRKDC-207ENST00000536483 GPC3P51654 580 aa13.91□□□□□ -0.18
PRKDC-207ENST00000536483 KRT17Q04695 432 aa13.91□□□□□ -0.18
PRKDC-207ENST00000536483 SIGLEC14Q08ET2 396 aa13.91□□□□□ -0.18
PRKDC-207ENST00000536483 CALCRLQ16602 461 aa13.91□□□□□ -0.18
PRKDC-207ENST00000536483 CLLU1OSQ5K130 101 aa13.91□□□□□ -0.18
PRKDC-207ENST00000536483 TMC7Q7Z402 723 aa13.91□□□□□ -0.18
PRKDC-207ENST00000536483 FAM184AQ8NB25 1140 aa13.91□□□□□ -0.18
PRKDC-207ENST00000536483 BACH2Q9BYV9 841 aa13.91□□□□□ -0.18
PRKDC-207ENST00000536483 TTC12Q9H892 705 aaPredicted RBP13.91□□□□□ -0.18
PRKDC-207ENST00000536483 CYP26B1Q9NR63 512 aa13.91□□□□□ -0.18
PRKDC-207ENST00000536483 KIF3AQ9Y496 699 aa13.91□□□□□ -0.18
PRKDC-207ENST00000536483 WDR81Q562E7 1941 aa13.9□□□□□ -0.18
PRKDC-207ENST00000536483 DDX11L8A8MPP1 907 aa13.9□□□□□ -0.18
PRKDC-207ENST00000536483 GAS2O43903 313 aaKnown RBP13.9□□□□□ -0.18
PRKDC-207ENST00000536483 DARSP14868 501 aaKnown RBP13.9□□□□□ -0.18
PRKDC-207ENST00000536483 SP100P23497 879 aaPredicted RBP13.9□□□□□ -0.18
PRKDC-207ENST00000536483 PPM1AP35813 382 aa13.9□□□□□ -0.18
PRKDC-207ENST00000536483 DNM2P50570 870 aa13.9□□□□□ -0.18
PRKDC-207ENST00000536483 OTUD6AQ7L8S5 288 aa13.9□□□□□ -0.18
PRKDC-207ENST00000536483 ZNF410Q86VK4 478 aa13.9□□□□□ -0.18
PRKDC-207ENST00000536483 FBXL6Q8N531 539 aa13.9□□□□□ -0.18
PRKDC-207ENST00000536483 C4orf32Q8N8J7 132 aa13.9□□□□□ -0.18
PRKDC-207ENST00000536483 ASIC4Q96FT7 647 aa13.9□□□□□ -0.18
PRKDC-207ENST00000536483 SCLT1Q96NL6 688 aa13.9□□□□□ -0.18
PRKDC-207ENST00000536483 LXNQ9BS40 222 aa13.9□□□□□ -0.18
PRKDC-207ENST00000536483 TRAIPQ9BWF2 469 aa13.9□□□□□ -0.18
PRKDC-207ENST00000536483 TMEM60Q9H2L4 133 aa13.9□□□□□ -0.18
PRKDC-207ENST00000536483 SPG21Q9NZD8 308 aa13.9□□□□□ -0.18
PRKDC-207ENST00000536483 RGL1Q9NZL6 768 aa13.9□□□□□ -0.18
PRKDC-207ENST00000536483 SEPT9Q9UHD8 586 aaPredicted RBP13.9□□□□□ -0.18
PRKDC-207ENST00000536483 CDH22Q9UJ99 828 aa13.9□□□□□ -0.18
PRKDC-207ENST00000536483 USP34Q70CQ2 3546 aa13.9□□□□□ -0.18
PRKDC-207ENST00000536483 A0A0U1RQF3 1178 aa13.89□□□□□ -0.19
PRKDC-207ENST00000536483 TMEM150BA6NC51 233 aa13.89□□□□□ -0.19
PRKDC-207ENST00000536483 NT5C1B-RDH14C9J2C7 533 aa13.89□□□□□ -0.19
PRKDC-207ENST00000536483 MARCH6O60337 910 aa13.89□□□□□ -0.19
PRKDC-207ENST00000536483 CSDE1O75534 798 aaKnown RBP13.89□□□□□ -0.19
PRKDC-207ENST00000536483 HOXB8P17481 243 aaPredicted RBP13.89□□□□□ -0.19
PRKDC-207ENST00000536483 YWHABP31946 246 aaKnown RBP13.89□□□□□ -0.19
PRKDC-207ENST00000536483 RFC5P40937 340 aa13.89□□□□□ -0.19
PRKDC-207ENST00000536483 PTPN5P54829 565 aa13.89□□□□□ -0.19
PRKDC-207ENST00000536483 GUCY1B3Q02153 619 aa13.89□□□□□ -0.19
PRKDC-207ENST00000536483 DRP2Q13474 957 aa13.89□□□□□ -0.19
PRKDC-207ENST00000536483 PTPN21Q16825 1174 aa13.89□□□□□ -0.19
PRKDC-207ENST00000536483 MTERF2Q49AM1 385 aa13.89□□□□□ -0.19
PRKDC-207ENST00000536483 ZNF598Q86UK7 904 aaKnown RBP13.89□□□□□ -0.19
PRKDC-207ENST00000536483 SLC39A11Q8N1S5 342 aa13.89□□□□□ -0.19
PRKDC-207ENST00000536483 MRPL43Q8N983 215 aaKnown RBP13.89□□□□□ -0.19
PRKDC-207ENST00000536483 HELQQ8TDG4 1101 aa13.89□□□□□ -0.19
PRKDC-207ENST00000536483 NLRP7Q8WX94 980 aa13.89□□□□□ -0.19
PRKDC-207ENST00000536483 CASP10Q92851 521 aa13.89□□□□□ -0.19
PRKDC-207ENST00000536483 DYDC2Q96IM9 177 aa13.89□□□□□ -0.19
PRKDC-207ENST00000536483 EIF2AK1Q9BQI3 630 aaKnown RBP13.89□□□□□ -0.19
PRKDC-207ENST00000536483 ANKEF1Q9NU02 776 aa13.89□□□□□ -0.19
PRKDC-207ENST00000536483 HCFC2Q9Y5Z7 792 aa13.89□□□□□ -0.19
PRKDC-207ENST00000536483 C2orf71A6NGG8 1288 aa13.88□□□□□ -0.19
PRKDC-207ENST00000536483 EOMESO95936 686 aa13.88□□□□□ -0.19
PRKDC-207ENST00000536483 MUTP22033 750 aa13.88□□□□□ -0.19
PRKDC-207ENST00000536483 VCPP55072 806 aaKnown RBP13.88□□□□□ -0.19
PRKDC-207ENST00000536483 NPEPPSP55786 919 aa13.88□□□□□ -0.19
PRKDC-207ENST00000536483 POU5F1BQ06416 359 aa13.88□□□□□ -0.19
PRKDC-207ENST00000536483 TCF15Q12870 199 aa13.88□□□□□ -0.19
PRKDC-207ENST00000536483 SMC1AQ14683 1233 aaKnown RBP13.88□□□□□ -0.19
PRKDC-207ENST00000536483 NCAPH2Q6IBW4 605 aa13.88□□□□□ -0.19
PRKDC-207ENST00000536483 ZBTB33Q86T24 672 aa13.88□□□□□ -0.19
PRKDC-207ENST00000536483 ZNF579Q8NAF0 562 aaKnown RBP13.88□□□□□ -0.19
PRKDC-207ENST00000536483 SLC7A3Q8WY07 619 aa13.88□□□□□ -0.19
PRKDC-207ENST00000536483 PRRX2Q99811 253 aa13.88□□□□□ -0.19
PRKDC-207ENST00000536483 SH2D3AQ9BRG2 576 aa13.88□□□□□ -0.19
PRKDC-207ENST00000536483 INO80BQ9C086 356 aaPredicted RBP13.88□□□□□ -0.19
PRKDC-207ENST00000536483 CHST12Q9NRB3 414 aa13.88□□□□□ -0.19
PRKDC-207ENST00000536483 SUCLA2Q9P2R7 463 aaPredicted RBP13.88□□□□□ -0.19
PRKDC-207ENST00000536483 ASAP2O43150 1006 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms