RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 CCDC85CA6NKD9 419 aa13.62□□□□□ -0.23
PABPC1-219ENST00000522387 INO80B-WBP1J3KQ70 363 aa13.62□□□□□ -0.23
PABPC1-219ENST00000522387 IQCF3P0C7M6 154 aa13.62□□□□□ -0.23
PABPC1-219ENST00000522387 ZNF131P52739 623 aa13.62□□□□□ -0.23
PABPC1-219ENST00000522387 IER5Q5VY09 327 aa13.62□□□□□ -0.23
PABPC1-219ENST00000522387 HAUS6Q7Z4H7 955 aa13.62□□□□□ -0.23
PABPC1-219ENST00000522387 CREBRFQ8IUR6 639 aa13.62□□□□□ -0.23
PABPC1-219ENST00000522387 DEPTORQ8TB45 409 aa13.62□□□□□ -0.23
PABPC1-219ENST00000522387 NOC3LQ8WTT2 800 aaKnown RBP13.62□□□□□ -0.23
PABPC1-219ENST00000522387 SCFD1Q8WVM8 642 aa13.62□□□□□ -0.23
PABPC1-219ENST00000522387 OSBPL7Q9BZF2 842 aa13.62□□□□□ -0.23
PABPC1-219ENST00000522387 INO80BQ9C086 356 aaPredicted RBP13.62□□□□□ -0.23
PABPC1-219ENST00000522387 SPTLC3Q9NUV7 552 aa13.62□□□□□ -0.23
PABPC1-219ENST00000522387 CTNND2Q9UQB3 1225 aa13.62□□□□□ -0.23
PABPC1-219ENST00000522387 COL1A2P08123 1366 aa13.62□□□□□ -0.23
PABPC1-219ENST00000522387 TTLL13PA6NNM8 815 aa13.62□□□□□ -0.23
PABPC1-219ENST00000522387 IBSPP21815 317 aaPredicted RBP13.62□□□□□ -0.23
PABPC1-219ENST00000522387 SMTNP53814 917 aa13.62□□□□□ -0.23
PABPC1-219ENST00000522387 PMS1P54277 932 aaKnown RBP13.62□□□□□ -0.23
PABPC1-219ENST00000522387 NLRP12P59046 1061 aa13.62□□□□□ -0.23
PABPC1-219ENST00000522387 EHHADHQ08426 723 aa13.62□□□□□ -0.23
PABPC1-219ENST00000522387 TRIM60Q495X7 471 aa13.62□□□□□ -0.23
PABPC1-219ENST00000522387 ZNF720Q7Z2F6 126 aa13.62□□□□□ -0.23
PABPC1-219ENST00000522387 TCP11Q8WWU5 503 aa13.62□□□□□ -0.23
PABPC1-219ENST00000522387 CEP290O15078 2479 aa13.61□□□□□ -0.23
PABPC1-219ENST00000522387 KCNB1Q14721 858 aa13.61□□□□□ -0.23
PABPC1-219ENST00000522387 SLC39A5Q6ZMH5 540 aa13.61□□□□□ -0.23
PABPC1-219ENST00000522387 TMEM161BQ8NDZ6 487 aa13.61□□□□□ -0.23
PABPC1-219ENST00000522387 TMEM40Q8WWA1 233 aa13.61□□□□□ -0.23
PABPC1-219ENST00000522387 ARID3AQ99856 593 aa13.61□□□□□ -0.23
PABPC1-219ENST00000522387 JPH2Q9BR39 696 aaPredicted RBP13.61□□□□□ -0.23
PABPC1-219ENST00000522387 IFT122Q9HBG6 1241 aa13.61□□□□□ -0.23
PABPC1-219ENST00000522387 MXD4Q14582 209 aaPredicted RBP13.61□□□□□ -0.23
PABPC1-219ENST00000522387 STX1AQ16623 288 aa13.61□□□□□ -0.23
PABPC1-219ENST00000522387 LINC01465Q8N7H1 131 aa13.61□□□□□ -0.23
PABPC1-219ENST00000522387 ANO10Q9NW15 660 aa13.61□□□□□ -0.23
PABPC1-219ENST00000522387 TNRC18O15417 2968 aaPredicted RBP13.6□□□□□ -0.23
PABPC1-219ENST00000522387 PPP1R3GB7ZBB8 358 aa13.6□□□□□ -0.23
PABPC1-219ENST00000522387 K7ERI5 159 aa13.6□□□□□ -0.23
PABPC1-219ENST00000522387 CLIC2O15247 247 aa13.6□□□□□ -0.23
PABPC1-219ENST00000522387 B4GALT5O43286 388 aa13.6□□□□□ -0.23
PABPC1-219ENST00000522387 EDN1P05305 212 aa13.6□□□□□ -0.23
PABPC1-219ENST00000522387 GAP43P17677 238 aa13.6□□□□□ -0.23
PABPC1-219ENST00000522387 HOXC8P31273 242 aa13.6□□□□□ -0.23
PABPC1-219ENST00000522387 HOXD13P35453 343 aa13.6□□□□□ -0.23
PABPC1-219ENST00000522387 GPC3P51654 580 aa13.6□□□□□ -0.23
PABPC1-219ENST00000522387 TLE2Q04725 743 aa13.6□□□□□ -0.23
PABPC1-219ENST00000522387 LRRC26Q2I0M4 334 aa13.6□□□□□ -0.23
PABPC1-219ENST00000522387 SERINC5Q86VE9 423 aa13.6□□□□□ -0.23
PABPC1-219ENST00000522387 SYCP3Q8IZU3 236 aa13.6□□□□□ -0.23
PABPC1-219ENST00000522387 DHX38Q92620 1227 aaKnown RBP13.6□□□□□ -0.23
PABPC1-219ENST00000522387 PPP1R12CQ9BZL4 782 aa13.6□□□□□ -0.23
PABPC1-219ENST00000522387 OLFML3Q9NRN5 406 aa13.6□□□□□ -0.23
PABPC1-219ENST00000522387 UMODL1Q5DID0 1318 aa13.6□□□□□ -0.23
PABPC1-219ENST00000522387 SMIM35A0A1B0GVV1 85 aa13.59□□□□□ -0.23
PABPC1-219ENST00000522387 TMEM132AQ24JP5 1023 aa13.59□□□□□ -0.23
PABPC1-219ENST00000522387 TAS1R3Q7RTX0 852 aa13.59□□□□□ -0.23
PABPC1-219ENST00000522387 EXOC8Q8IYI6 725 aa13.59□□□□□ -0.23
PABPC1-219ENST00000522387 MYOCDQ8IZQ8 938 aa13.59□□□□□ -0.23
PABPC1-219ENST00000522387 BICD1Q96G01 975 aa13.59□□□□□ -0.23
PABPC1-219ENST00000522387 C11orf49Q9H6J7 331 aa13.59□□□□□ -0.23
PABPC1-219ENST00000522387 GPR32O75388 356 aa13.59□□□□□ -0.23
PABPC1-219ENST00000522387 TPM3P06753 285 aa13.59□□□□□ -0.23
PABPC1-219ENST00000522387 HARSP12081 509 aaKnown RBP13.59□□□□□ -0.23
PABPC1-219ENST00000522387 NAMPTP43490 491 aa13.59□□□□□ -0.23
PABPC1-219ENST00000522387 ZNF618Q5T7W0 954 aa13.59□□□□□ -0.23
PABPC1-219ENST00000522387 NECAB2Q7Z6G3 386 aa13.59□□□□□ -0.23
PABPC1-219ENST00000522387 FAM126BQ8IXS8 530 aa13.59□□□□□ -0.23
PABPC1-219ENST00000522387 NELFBQ8WX92 580 aa13.59□□□□□ -0.23
PABPC1-219ENST00000522387 CPB2Q96IY4 423 aa13.59□□□□□ -0.23
PABPC1-219ENST00000522387 MED15Q96RN5 788 aa13.59□□□□□ -0.23
PABPC1-219ENST00000522387 TIPINQ9BVW5 301 aa13.59□□□□□ -0.23
PABPC1-219ENST00000522387 KCNF1Q9H3M0 494 aa13.59□□□□□ -0.23
PABPC1-219ENST00000522387 PRDM5Q9NQX1 630 aaPredicted RBP13.59□□□□□ -0.23
PABPC1-219ENST00000522387 CDY2AQ9Y6F7 541 aa13.59□□□□□ -0.23
PABPC1-219ENST00000522387 GAS2O43903 313 aaKnown RBP13.58□□□□□ -0.23
PABPC1-219ENST00000522387 CHRNA1P02708 482 aa13.58□□□□□ -0.23
PABPC1-219ENST00000522387 COL6A1P12109 1028 aa13.58□□□□□ -0.23
PABPC1-219ENST00000522387 GTF2F1P35269 517 aaKnown RBP eCLIP13.58□□□□□ -0.23
PABPC1-219ENST00000522387 CDK7P50613 346 aa13.58□□□□□ -0.23
PABPC1-219ENST00000522387 NCKAP1LP55160 1127 aa13.58□□□□□ -0.23
PABPC1-219ENST00000522387 NFX1Q12986 1120 aaKnown RBP13.58□□□□□ -0.23
PABPC1-219ENST00000522387 ADSSL1Q8N142 457 aa13.58□□□□□ -0.23
PABPC1-219ENST00000522387 AOPEPQ8N6M6 819 aa13.58□□□□□ -0.23
PABPC1-219ENST00000522387 TRIML1Q8N9V2 468 aa13.58□□□□□ -0.23
PABPC1-219ENST00000522387 TSC1Q92574 1164 aa13.58□□□□□ -0.23
PABPC1-219ENST00000522387 SEMA6BQ9H3T3 888 aa13.58□□□□□ -0.23
PABPC1-219ENST00000522387 PCIF1Q9H4Z3 704 aa13.58□□□□□ -0.23
PABPC1-219ENST00000522387 ANKFY1Q9P2R3 1169 aa13.58□□□□□ -0.23
PABPC1-219ENST00000522387 TBX20Q9UMR3 447 aa13.58□□□□□ -0.23
PABPC1-219ENST00000522387 HNRNPDLO14979 420 aaKnown RBP13.58□□□□□ -0.24
PABPC1-219ENST00000522387 MAPTP10636 758 aaKnown RBP13.58□□□□□ -0.24
PABPC1-219ENST00000522387 CCL23P55773 120 aa13.58□□□□□ -0.24
PABPC1-219ENST00000522387 PSMD2Q13200 908 aa13.58□□□□□ -0.24
PABPC1-219ENST00000522387 PPP2R5AQ15172 486 aa13.58□□□□□ -0.24
PABPC1-219ENST00000522387 SEZ6Q53EL9 994 aa13.58□□□□□ -0.24
PABPC1-219ENST00000522387 ANKRD40Q6AI12 368 aa13.58□□□□□ -0.24
PABPC1-219ENST00000522387 TAF2Q6P1X5 1199 aa13.58□□□□□ -0.24
PABPC1-219ENST00000522387 SESTD1Q86VW0 696 aa13.58□□□□□ -0.24
PABPC1-219ENST00000522387 MLKLQ8NB16 471 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms