RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 MAN2B1O00754 1011 aa5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 SCDO00767 359 aa5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 KDM1AO60341 852 aa5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 H2AFYO75367 372 aaKnown RBP5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 DGKIO75912 1065 aa5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 IL33O95760 270 aa5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 IGKV5-2P06315 115 aa5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 HSP90AB1P08238 724 aaKnown RBP5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 MX1P20591 662 aa5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 CYP2C19P33261 490 aa5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 SMAD3P84022 425 aaKnown RBP5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 SMAD2Q15796 467 aaKnown RBP5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 MINDY4Q4G0A6 757 aa5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 HABP4Q5JVS0 413 aaKnown RBP5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 GPR158Q5T848 1215 aa5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 TOM1L2Q6ZVM7 507 aa5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 ZNF610Q8N9Z0 462 aa5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 TMEM52Q8NDY8 209 aa5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 PIP4K2CQ8TBX8 421 aa5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 SNX21Q969T3 373 aa5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 CLIP3Q96DZ5 547 aa5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 KAZALD1Q96I82 304 aa5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 SUCLG2Q96I99 432 aa5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 MAP6Q96JE9 813 aa5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 MS4A5Q9H3V2 200 aa5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 STAP2Q9UGK3 403 aa5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 ZBTB21Q9ULJ3 1066 aa5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 SRPK3Q9UPE1 567 aa5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 RWDD3Q9Y3V2 267 aa5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 SNX11Q9Y5W9 270 aa5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 USP42Q9H9J4 1324 aaKnown RBP5.72□□□□□ -1.49
CTNNA1-212ENST00000518919 COL14A1Q05707 1796 aaKnown RBP5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 ARFGEF2Q9Y6D5 1785 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 TCRBV5S4A2TA0A5A2 114 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 TRIM75PA6NK02 468 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 C1QTNF9BB2RNN3 333 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 GRM8O00222 908 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 KRIT1O00522 736 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 DVL2O14641 736 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 NKRFO15226 690 aaKnown RBP eCLIP5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 GSC2O15499 205 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 SRGAP3O43295 1099 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 LTFP02788 710 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 FUCA1P04066 466 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 SNRPA1P09661 255 aaKnown RBP5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 IL2RBP14784 551 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 VCAM1P19320 739 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 CD40P25942 277 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 DDIT3P35638 169 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 GATA4P43694 442 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 PIP4K2AP48426 406 aaPredicted RBP5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 ACAP2Q15057 778 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 MROH9Q5TGP6 573 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 ANGEL2Q5VTE6 544 aaKnown RBP5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 CPZQ66K79 652 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 UNC5CLQ8IV45 518 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 CMIPQ8IY22 773 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 CMTR2Q8IYT2 770 aaKnown RBP5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 SAMD3Q8N6K7 520 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 LINS1Q8NG48 757 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 USP33Q8TEY7 942 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 HSPBAP1Q96EW2 488 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 LRGUKQ96M69 825 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 FMNL2Q96PY5 1086 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 CD244Q9BZW8 370 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 ZDHHC5Q9C0B5 715 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 ZMAT4Q9H898 229 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 SP110Q9HB58 689 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 IL1RAPL2Q9NP60 686 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 ACSS2Q9NR19 701 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 CCM2LQ9NUG4 571 aaPredicted RBP5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 TNFRSF10DQ9UBN6 386 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 DSEQ9UL01 958 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 X6R8D5 127 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 TJP1Q07157 1748 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 NUP188Q5SRE5 1749 aa5.71□□□□□ -1.5
CTNNA1-212ENST00000518919 LRP6O75581 1613 aa5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 COL15A1P39059 1388 aa5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 WNK3Q9BYP7 1800 aa5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 CYP26A1O43174 497 aa5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 SURF6O75683 361 aaKnown RBP5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 DDX58O95786 925 aaKnown RBP5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 MYL6BP14649 208 aa5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 PURAQ00577 322 aaKnown RBP5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 AIMP1Q12904 312 aaKnown RBP5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 ODF1Q14990 250 aa5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 EPHA10Q5JZY3 1008 aa5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 ESRP1Q6NXG1 681 aaKnown RBP5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 TTLL7Q6ZT98 887 aa5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 HSCBQ8IWL3 235 aa5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 ZZZ3Q8IYH5 903 aa5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 NLGN4XQ8N0W4 816 aa5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 TTC5Q8N0Z6 440 aa5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 SH3RF2Q8TEC5 729 aa5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 TIFAQ96CG3 184 aa5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 HHIPL1Q96JK4 782 aa5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 HRASLS5Q96KN8 279 aa5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 AIFM3Q96NN9 605 aa5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 JMJD8Q96S16 334 aa5.7□□□□□ -1.5
CTNNA1-212ENST00000518919 NUP88Q99567 741 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms