RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 CD4P01730 458 aa8□□□□□ -1.13
RFC1-215ENST00000512881 PARP1P09874 1014 aaKnown RBP8□□□□□ -1.13
RFC1-215ENST00000512881 PSMC6P62333 389 aa8□□□□□ -1.13
RFC1-215ENST00000512881 ITGA7Q13683 1181 aa8□□□□□ -1.13
RFC1-215ENST00000512881 CDC37Q16543 378 aaPredicted RBP8□□□□□ -1.13
RFC1-215ENST00000512881 USH1GQ495M9 461 aa8□□□□□ -1.13
RFC1-215ENST00000512881 ASPRV1Q53RT3 343 aa8□□□□□ -1.13
RFC1-215ENST00000512881 C16orf59Q7L2K0 433 aa8□□□□□ -1.13
RFC1-215ENST00000512881 ADGRF4Q8IZF3 695 aa8□□□□□ -1.13
RFC1-215ENST00000512881 DNERQ8NFT8 737 aa8□□□□□ -1.13
RFC1-215ENST00000512881 EPS8L3Q8TE67 593 aaKnown RBP8□□□□□ -1.13
RFC1-215ENST00000512881 TBC1D5Q92609 795 aa8□□□□□ -1.13
RFC1-215ENST00000512881 MPHOSPH6Q99547 160 aaKnown RBP8□□□□□ -1.13
RFC1-215ENST00000512881 CORO1BQ9BR76 489 aa8□□□□□ -1.13
RFC1-215ENST00000512881 UBAC1Q9BSL1 405 aa8□□□□□ -1.13
RFC1-215ENST00000512881 SEZ6LQ9BYH1 1024 aa8□□□□□ -1.13
RFC1-215ENST00000512881 TRPV6Q9H1D0 765 aa8□□□□□ -1.13
RFC1-215ENST00000512881 JMJD4Q9H9V9 463 aa8□□□□□ -1.13
RFC1-215ENST00000512881 VAT1LQ9HCJ6 419 aa8□□□□□ -1.13
RFC1-215ENST00000512881 COL11A1P12107 1806 aaPredicted RBP8□□□□□ -1.13
RFC1-215ENST00000512881 PARP14Q460N5 1801 aa8□□□□□ -1.13
RFC1-215ENST00000512881 TNKSO95271 1327 aa8□□□□□ -1.13
RFC1-215ENST00000512881 ZNFX1Q9P2E3 1918 aaKnown RBP7.99□□□□□ -1.13
RFC1-215ENST00000512881 B4DLN1 442 aa7.99□□□□□ -1.13
RFC1-215ENST00000512881 DHX16O60231 1041 aaKnown RBP7.99□□□□□ -1.13
RFC1-215ENST00000512881 GADD45BO75293 160 aaPredicted RBP7.99□□□□□ -1.13
RFC1-215ENST00000512881 ACRP10323 421 aa7.99□□□□□ -1.13
RFC1-215ENST00000512881 CSF2RAP15509 400 aa7.99□□□□□ -1.13
RFC1-215ENST00000512881 EDNRBP24530 442 aa7.99□□□□□ -1.13
RFC1-215ENST00000512881 CHMLP26374 656 aa7.99□□□□□ -1.13
RFC1-215ENST00000512881 CYP2C18P33260 490 aa7.99□□□□□ -1.13
RFC1-215ENST00000512881 MRPL12P52815 198 aaKnown RBP7.99□□□□□ -1.13
RFC1-215ENST00000512881 PTH1RQ03431 593 aa7.99□□□□□ -1.13
RFC1-215ENST00000512881 PPIGQ13427 754 aaKnown RBP eCLIP7.99□□□□□ -1.13
RFC1-215ENST00000512881 SEC23AQ15436 765 aa7.99□□□□□ -1.13
RFC1-215ENST00000512881 QRICH1Q2TAL8 776 aa7.99□□□□□ -1.13
RFC1-215ENST00000512881 RPS26P11Q5JNZ5 115 aaPredicted RBP7.99□□□□□ -1.13
RFC1-215ENST00000512881 HP1BP3Q5SSJ5 553 aaPredicted RBP7.99□□□□□ -1.13
RFC1-215ENST00000512881 TMEM240Q5SV17 173 aa7.99□□□□□ -1.13
RFC1-215ENST00000512881 IFIT1BQ5T764 474 aaKnown RBP7.99□□□□□ -1.13
RFC1-215ENST00000512881 CYB5R4Q7L1T6 521 aa7.99□□□□□ -1.13
RFC1-215ENST00000512881 MCF2L2Q86YR7 1114 aa7.99□□□□□ -1.13
RFC1-215ENST00000512881 TMEM199Q8N511 208 aa7.99□□□□□ -1.13
RFC1-215ENST00000512881 OR6J1Q8NGC5 347 aa7.99□□□□□ -1.13
RFC1-215ENST00000512881 SYTL5Q8TDW5 730 aaPredicted RBP7.99□□□□□ -1.13
RFC1-215ENST00000512881 SCFD2Q8WU76 684 aa7.99□□□□□ -1.13
RFC1-215ENST00000512881 RUFY2Q8WXA3 655 aa7.99□□□□□ -1.13
RFC1-215ENST00000512881 TAAR1Q96RJ0 339 aa7.99□□□□□ -1.13
RFC1-215ENST00000512881 CDX2Q99626 313 aaPredicted RBP7.99□□□□□ -1.13
RFC1-215ENST00000512881 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.99□□□□□ -1.135e-11■■□□□ 13.1
RFC1-215ENST00000512881 KRTAP9-2Q9BYQ4 174 aa7.99□□□□□ -1.13
RFC1-215ENST00000512881 MAF1Q9H063 256 aa7.99□□□□□ -1.13
RFC1-215ENST00000512881 DCTN4Q9UJW0 460 aa7.99□□□□□ -1.13
RFC1-215ENST00000512881 MRPL11Q9Y3B7 192 aaKnown RBP7.99□□□□□ -1.13
RFC1-215ENST00000512881 UNC80Q8N2C7 3258 aa7.99□□□□□ -1.13
RFC1-215ENST00000512881 CHD9Q3L8U1 2897 aa7.99□□□□□ -1.13
RFC1-215ENST00000512881 ABCB11O95342 1321 aa7.99□□□□□ -1.13
RFC1-215ENST00000512881 CUL9Q8IWT3 2517 aa7.98□□□□□ -1.13
RFC1-215ENST00000512881 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.98□□□□□ -1.13
RFC1-215ENST00000512881 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.98□□□□□ -1.13
RFC1-215ENST00000512881 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.98□□□□□ -1.13
RFC1-215ENST00000512881 KLRF2D3W0D1 207 aa7.98□□□□□ -1.13
RFC1-215ENST00000512881 NKRFO15226 690 aaKnown RBP eCLIP7.98□□□□□ -1.13
RFC1-215ENST00000512881 B4GALT4O60513 344 aa7.98□□□□□ -1.13
RFC1-215ENST00000512881 MYL3P08590 195 aa7.98□□□□□ -1.13
RFC1-215ENST00000512881 TXNP10599 105 aaKnown RBP7.98□□□□□ -1.13
RFC1-215ENST00000512881 CPT1AP50416 773 aa7.98□□□□□ -1.13
RFC1-215ENST00000512881 USP11P51784 963 aa7.98□□□□□ -1.13
RFC1-215ENST00000512881 PURAQ00577 322 aaKnown RBP7.98□□□□□ -1.13
RFC1-215ENST00000512881 TRDNQ13061 729 aa7.98□□□□□ -1.13
RFC1-215ENST00000512881 PPP2R5BQ15173 497 aa7.98□□□□□ -1.13
RFC1-215ENST00000512881 BRDTQ58F21 947 aaPredicted RBP7.98□□□□□ -1.13
RFC1-215ENST00000512881 PAOXQ6QHF9 649 aa7.98□□□□□ -1.13
RFC1-215ENST00000512881 ZNF365Q70YC5 407 aa7.98□□□□□ -1.13
RFC1-215ENST00000512881 FBXL6Q8N531 539 aa7.98□□□□□ -1.13
RFC1-215ENST00000512881 NSUN6Q8TEA1 469 aaKnown RBP7.98□□□□□ -1.13
RFC1-215ENST00000512881 COPS5Q92905 334 aa7.98□□□□□ -1.13
RFC1-215ENST00000512881 GATA6Q92908 595 aa7.98□□□□□ -1.13
RFC1-215ENST00000512881 MTG1Q9BT17 334 aaPredicted RBP7.98□□□□□ -1.13
RFC1-215ENST00000512881 NOC4LQ9BVI4 516 aaKnown RBP7.98□□□□□ -1.13
RFC1-215ENST00000512881 ALDH8A1Q9H2A2 487 aaPredicted RBP7.98□□□□□ -1.13
RFC1-215ENST00000512881 TTYH1Q9H313 450 aaPredicted RBP7.98□□□□□ -1.13
RFC1-215ENST00000512881 HIPK3Q9H422 1215 aa7.98□□□□□ -1.13
RFC1-215ENST00000512881 GSX1Q9H4S2 264 aaPredicted RBP7.98□□□□□ -1.13
RFC1-215ENST00000512881 FAM105AQ9NUU6 356 aa7.98□□□□□ -1.13
RFC1-215ENST00000512881 OAS3Q9Y6K5 1087 aaKnown RBP7.98□□□□□ -1.13
RFC1-215ENST00000512881 PRUNE2Q8WUY3 3088 aa7.98□□□□□ -1.13
RFC1-215ENST00000512881 RAD50Q92878 1312 aa7.98□□□□□ -1.13
RFC1-215ENST00000512881 MYH4Q9Y623 1939 aa7.97□□□□□ -1.13
RFC1-215ENST00000512881 FRMPD3Q5JV73 1810 aa7.97□□□□□ -1.13
RFC1-215ENST00000512881 E7EWF7 191 aa7.97□□□□□ -1.13
RFC1-215ENST00000512881 IFIT3O14879 490 aaKnown RBP7.97□□□□□ -1.13
RFC1-215ENST00000512881 SGSM2O43147 1006 aa7.97□□□□□ -1.13
RFC1-215ENST00000512881 KPNA6O60684 536 aa7.97□□□□□ -1.13
RFC1-215ENST00000512881 ARIH2O95376 493 aa7.97□□□□□ -1.13
RFC1-215ENST00000512881 FGBP02675 491 aa7.97□□□□□ -1.13
RFC1-215ENST00000512881 CYP21A2P08686 494 aa7.97□□□□□ -1.13
RFC1-215ENST00000512881 SUPT20HL2P0C7V6 817 aa7.97□□□□□ -1.13
RFC1-215ENST00000512881 RAB6AP20340 208 aa7.97□□□□□ -1.13
RFC1-215ENST00000512881 ADMP35318 185 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms