RNA–Protein interactions for RNA: ENST00000512466.1

PDCD6-209, Transcript of programmed cell death 6, humanhuman

TSL 2

Gene PDCD6, Length 3,763 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-209ENST00000512466 TCP11X1B4DZS4 312 aa11.48□□□□□ -0.57
PDCD6-209ENST00000512466 TISP43B9A030 160 aa11.48□□□□□ -0.57
PDCD6-209ENST00000512466 LMNB1P20700 586 aa11.48□□□□□ -0.57
PDCD6-209ENST00000512466 PCK1P35558 622 aa11.48□□□□□ -0.57
PDCD6-209ENST00000512466 GPATCH4Q5T3I0 446 aaKnown RBP11.48□□□□□ -0.57
PDCD6-209ENST00000512466 FAM102BQ5T8I3 360 aa11.48□□□□□ -0.57
PDCD6-209ENST00000512466 STYK1Q6J9G0 422 aa11.48□□□□□ -0.57
PDCD6-209ENST00000512466 PASD1Q8IV76 773 aa11.48□□□□□ -0.57
PDCD6-209ENST00000512466 FBF1Q8TES7 1133 aa11.48□□□□□ -0.57
PDCD6-209ENST00000512466 JDP2Q8WYK2 163 aa11.48□□□□□ -0.57
PDCD6-209ENST00000512466 VPS37BQ9H9H4 285 aa11.48□□□□□ -0.57
PDCD6-209ENST00000512466 PARVGQ9HBI0 331 aa11.48□□□□□ -0.57
PDCD6-209ENST00000512466 FGFR1OP2Q9NVK5 253 aa11.48□□□□□ -0.57
PDCD6-209ENST00000512466 CCDC188H7C350 402 aa11.48□□□□□ -0.57
PDCD6-209ENST00000512466 GH2P01242 217 aa11.48□□□□□ -0.57
PDCD6-209ENST00000512466 FXR2P51116 673 aaKnown RBP eCLIP11.48□□□□□ -0.57
PDCD6-209ENST00000512466 CDK17Q00537 523 aa11.48□□□□□ -0.57
PDCD6-209ENST00000512466 DALRD3Q5D0E6 543 aaKnown RBP11.48□□□□□ -0.57
PDCD6-209ENST00000512466 MIGA2Q7L4E1 593 aa11.48□□□□□ -0.57
PDCD6-209ENST00000512466 TAOK1Q7L7X3 1001 aa11.48□□□□□ -0.57
PDCD6-209ENST00000512466 TBC1D16Q8TBP0 767 aa11.48□□□□□ -0.57
PDCD6-209ENST00000512466 SAAL1Q96ER3 474 aa11.48□□□□□ -0.57
PDCD6-209ENST00000512466 XPO6Q96QU8 1125 aaKnown RBP11.48□□□□□ -0.57
PDCD6-209ENST00000512466 SH3GL2Q99962 352 aa11.48□□□□□ -0.57
PDCD6-209ENST00000512466 EIF2AK1Q9BQI3 630 aaKnown RBP11.48□□□□□ -0.57
PDCD6-209ENST00000512466 GDF3Q9NR23 364 aa11.48□□□□□ -0.57
PDCD6-209ENST00000512466 KLHL11Q9NVR0 708 aa11.48□□□□□ -0.57
PDCD6-209ENST00000512466 ALG6Q9Y672 507 aa11.48□□□□□ -0.57
PDCD6-209ENST00000512466 FOXN3O00409 490 aaPredicted RBP11.47□□□□□ -0.57
PDCD6-209ENST00000512466 SPAG7O75391 227 aa11.47□□□□□ -0.57
PDCD6-209ENST00000512466 DPEP1P16444 411 aa11.47□□□□□ -0.57
PDCD6-209ENST00000512466 LACTBP83111 547 aaPredicted RBP11.47□□□□□ -0.57
PDCD6-209ENST00000512466 TMED2Q15363 201 aa11.47□□□□□ -0.57
PDCD6-209ENST00000512466 CRY2Q49AN0 593 aa11.47□□□□□ -0.57
PDCD6-209ENST00000512466 SLC20A1Q8WUM9 679 aa11.47□□□□□ -0.57
PDCD6-209ENST00000512466 ATG4AQ8WYN0 398 aa11.47□□□□□ -0.57
PDCD6-209ENST00000512466 DNAJC19Q96DA6 116 aa11.47□□□□□ -0.57
PDCD6-209ENST00000512466 C9orf72Q96LT7 481 aa11.47□□□□□ -0.57
PDCD6-209ENST00000512466 POP1Q99575 1024 aaKnown RBP11.47□□□□□ -0.57
PDCD6-209ENST00000512466 HOMER3Q9NSC5 361 aa11.47□□□□□ -0.57
PDCD6-209ENST00000512466 TMOD2Q9NZR1 351 aa11.47□□□□□ -0.57
PDCD6-209ENST00000512466 NUP98P52948 1817 aa11.47□□□□□ -0.57
PDCD6-209ENST00000512466 F5H6K3 240 aa11.47□□□□□ -0.57
PDCD6-209ENST00000512466 DDX3XO00571 662 aaKnown RBP eCLIP11.47□□□□□ -0.57
PDCD6-209ENST00000512466 KLRC3Q07444 240 aa11.47□□□□□ -0.57
PDCD6-209ENST00000512466 JAMLQ86YT9 394 aa11.47□□□□□ -0.57
PDCD6-209ENST00000512466 ARHGEF2Q92974 986 aaKnown RBP11.47□□□□□ -0.57
PDCD6-209ENST00000512466 ARHGEF26Q96DR7 871 aa11.47□□□□□ -0.57
PDCD6-209ENST00000512466 INPP4AQ96PE3 977 aaPredicted RBP11.47□□□□□ -0.57
PDCD6-209ENST00000512466 TCHPQ9BT92 498 aa11.47□□□□□ -0.57
PDCD6-209ENST00000512466 PCDHAC2Q9Y5I4 1007 aa11.47□□□□□ -0.57
PDCD6-209ENST00000512466 GOLGA8SH3BPF8 625 aa11.47□□□□□ -0.57
PDCD6-209ENST00000512466 GOLGA8MH3BSY2 632 aa11.47□□□□□ -0.57
PDCD6-209ENST00000512466 CLDN3O15551 220 aa11.47□□□□□ -0.57
PDCD6-209ENST00000512466 CYP26A1O43174 497 aa11.47□□□□□ -0.57
PDCD6-209ENST00000512466 SCTRP47872 440 aa11.47□□□□□ -0.57
PDCD6-209ENST00000512466 ITGB3BPQ13352 177 aaPredicted RBP11.47□□□□□ -0.57
PDCD6-209ENST00000512466 KIAA1755Q5JYT7 1200 aa11.47□□□□□ -0.57
PDCD6-209ENST00000512466 SYCP2LQ5T4T6 812 aa11.47□□□□□ -0.57
PDCD6-209ENST00000512466 DAGLBQ8NCG7 672 aa11.47□□□□□ -0.57
PDCD6-209ENST00000512466 RNF217Q8TC41 542 aa11.47□□□□□ -0.57
PDCD6-209ENST00000512466 MTMR9Q96QG7 549 aa11.47□□□□□ -0.57
PDCD6-209ENST00000512466 RTFDC1Q9BY42 306 aaPredicted RBP11.47□□□□□ -0.57
PDCD6-209ENST00000512466 KIF9Q9HAQ2 790 aa11.47□□□□□ -0.57
PDCD6-209ENST00000512466 GCFC2P16383 781 aaKnown RBP11.46□□□□□ -0.57
PDCD6-209ENST00000512466 MARCKSL1P49006 195 aa11.46□□□□□ -0.57
PDCD6-209ENST00000512466 KYNUQ16719 465 aa11.46□□□□□ -0.57
PDCD6-209ENST00000512466 GNPTABQ3T906 1256 aa11.46□□□□□ -0.57
PDCD6-209ENST00000512466 TBC1D22AQ8WUA7 517 aa11.46□□□□□ -0.57
PDCD6-209ENST00000512466 CCDC77Q9BR77 488 aa11.46□□□□□ -0.57
PDCD6-209ENST00000512466 ZNF577Q9BSK1 485 aa11.46□□□□□ -0.57
PDCD6-209ENST00000512466 ALG13Q9NP73 1137 aaKnown RBP11.46□□□□□ -0.57
PDCD6-209ENST00000512466 DDX4Q9NQI0 724 aaKnown RBP11.46□□□□□ -0.57
PDCD6-209ENST00000512466 G3BP2Q9UN86 482 aaKnown RBP11.46□□□□□ -0.57
PDCD6-209ENST00000512466 EMSYQ7Z589 1322 aa11.46□□□□□ -0.57
PDCD6-209ENST00000512466 BAZ2AQ9UIF9 1905 aaKnown RBP11.46□□□□□ -0.57
PDCD6-209ENST00000512466 SOX5P35711 763 aa11.46□□□□□ -0.57
PDCD6-209ENST00000512466 ABCB5Q2M3G0 1257 aa11.46□□□□□ -0.57
PDCD6-209ENST00000512466 KCNV1Q6PIU1 500 aa11.46□□□□□ -0.57
PDCD6-209ENST00000512466 RFX8Q6ZV50 586 aa11.46□□□□□ -0.57
PDCD6-209ENST00000512466 ZFPM1Q8IX07 1006 aa11.46□□□□□ -0.57
PDCD6-209ENST00000512466 RBM46Q8TBY0 533 aaKnown RBP11.46□□□□□ -0.57
PDCD6-209ENST00000512466 KRT35Q92764 455 aa11.46□□□□□ -0.57
PDCD6-209ENST00000512466 PLVAPQ9BX97 442 aa11.46□□□□□ -0.57
PDCD6-209ENST00000512466 INTS2Q9H0H0 1204 aaKnown RBP11.46□□□□□ -0.57
PDCD6-209ENST00000512466 STMN4Q9H169 189 aaPredicted RBP11.46□□□□□ -0.57
PDCD6-209ENST00000512466 TYW1Q9NV66 732 aaKnown RBP11.46□□□□□ -0.57
PDCD6-209ENST00000512466 INTUQ9ULD6 942 aa11.46□□□□□ -0.57
PDCD6-209ENST00000512466 ATP11AP98196 1134 aa11.46□□□□□ -0.58
PDCD6-209ENST00000512466 GIT2Q14161 759 aa11.46□□□□□ -0.58
PDCD6-209ENST00000512466 CHADLQ6NUI6 762 aa11.46□□□□□ -0.58
PDCD6-209ENST00000512466 RTKN2Q8IZC4 609 aa11.46□□□□□ -0.58
PDCD6-209ENST00000512466 RFFLQ8WZ73 363 aa11.46□□□□□ -0.58
PDCD6-209ENST00000512466 PWWP2AQ96N64 755 aa11.46□□□□□ -0.58
PDCD6-209ENST00000512466 PURBQ96QR8 312 aaKnown RBP11.46□□□□□ -0.58
PDCD6-209ENST00000512466 TDRD3Q9H7E2 651 aaKnown RBP11.46□□□□□ -0.58
PDCD6-209ENST00000512466 KLHL14Q9P2G3 628 aa11.46□□□□□ -0.58
PDCD6-209ENST00000512466 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.46□□□□□ -0.58
PDCD6-209ENST00000512466 PIAS1O75925 651 aa11.45□□□□□ -0.58
PDCD6-209ENST00000512466 TNNI1P19237 187 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms