RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 PRUNE2Q8WUY3 3088 aa6.61□□□□□ -1.35
CACNA1C-229ENST00000496818 CUL9Q8IWT3 2517 aa6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 PI4K2BG5E9Z4 385 aa6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 GCOM1H8Y6P7 765 aaPredicted RBP6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 HAS3O00219 553 aa6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 TERTO14746 1132 aaKnown RBP6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 ZBTB5O15062 677 aa6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 DCXO43602 365 aa6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 PPFIA4O75335 1185 aa6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 STAM2O75886 525 aa6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 LGALS2P05162 132 aa6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 POLR2MP0CAP2 368 aa6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 SMIM10L2AP0DMW4 78 aa6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 SMIM10L2BP0DMW5 78 aa6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 TGFB3P10600 412 aa6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 HOXD8P13378 290 aaPredicted RBP6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 IL9P15248 144 aa6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 SDSP20132 328 aa6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 ATP11AP98196 1134 aa6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 SART3Q15020 963 aaKnown RBP6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 PGM5Q15124 567 aa6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 TRIM71Q2Q1W2 868 aaKnown RBP6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 BMP2KLQ5H9B9 411 aa6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 CELF3Q5SZQ8 465 aaKnown RBP6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 ZNF468Q5VIY5 522 aaPredicted RBP6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 CWC27Q6UX04 472 aaKnown RBP6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 DBF4BQ8NFT6 615 aa6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 PPP2R3CQ969Q6 453 aa6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 UIMC1Q96RL1 719 aa6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 POP1Q99575 1024 aaKnown RBP6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 C17orf80Q9BSJ5 609 aa6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 C11orf84Q9BUA3 381 aaPredicted RBP6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 DSCC1Q9BVC3 393 aa6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 IFIH1Q9BYX4 1025 aaKnown RBP6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 C22orf23Q9BZE7 217 aa6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 NSUN3Q9H649 340 aaKnown RBP6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 JMJD4Q9H9V9 463 aa6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 LIN7BQ9HAP6 207 aa6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 VAT1LQ9HCJ6 419 aa6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 PCDHA1Q9Y5I3 950 aa6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 MUC3AQ02505 3323 aa6.6□□□□□ -1.35
CACNA1C-229ENST00000496818 ADGRA3Q8IWK6 1321 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 METTL12A8MUP2 240 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 KLRF2D3W0D1 207 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 FIBPO43427 364 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 NCK2O43639 380 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 KIF4AO95239 1232 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 GHRHP01286 108 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 USP17L7P0C7H9 530 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 TCF3P15923 654 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 VAMP1P23763 118 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 HOXA13P31271 388 aaPredicted RBP6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 CTNNB1P35222 781 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 SOX18P35713 384 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 NRLP54845 237 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 HTRA4P83105 476 aaPredicted RBP6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 GHRHRQ02643 423 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 GPM6BQ13491 265 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 NEDD9Q14511 834 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 GPNMBQ14956 572 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 HSDL1Q3SXM5 330 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 EPC2Q52LR7 807 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 PLEKHG4Q58EX7 1191 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 KIAA0319Q5VV43 1072 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 METTL7BQ6UX53 244 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 RALYLQ86SE5 291 aaKnown RBP6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 RSPH3Q86UC2 560 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 FAM35AQ86V20 835 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 FCHSD1Q86WN1 690 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 FAM178BQ8IXR5 827 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 CEP120Q8N960 986 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 ANKS1AQ92625 1134 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 CUL5Q93034 780 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 WNT8BQ93098 351 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 PABPC5Q96DU9 382 aaKnown RBP6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 FRMD6Q96NE9 622 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 CNTNAP3BQ96NU0 1288 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 USP26Q9BXU7 913 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 CNTNAP3Q9BZ76 1288 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 UPF3BQ9BZI7 483 aaKnown RBP6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 RASSF4Q9H2L5 321 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 SUV39H2Q9H5I1 410 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 CLDND1Q9NY35 253 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 PRKAG3Q9UGI9 489 aa6.59□□□□□ -1.35
CACNA1C-229ENST00000496818 LAMA2P24043 3122 aaKnown RBP6.59□□□□□ -1.36
CACNA1C-229ENST00000496818 SCN10AQ9Y5Y9 1956 aa6.58□□□□□ -1.36
CACNA1C-229ENST00000496818 LCTP09848 1927 aa6.58□□□□□ -1.36
CACNA1C-229ENST00000496818 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.58□□□□□ -1.36
CACNA1C-229ENST00000496818 H3BNC9 293 aa6.58□□□□□ -1.36
CACNA1C-229ENST00000496818 H3BQ06 376 aaPredicted RBP6.58□□□□□ -1.36
CACNA1C-229ENST00000496818 SIN3BO75182 1162 aa6.58□□□□□ -1.36
CACNA1C-229ENST00000496818 RPLP2P05387 115 aaKnown RBP6.58□□□□□ -1.36
CACNA1C-229ENST00000496818 GPLD1P80108 840 aa6.58□□□□□ -1.36
CACNA1C-229ENST00000496818 ZNF200P98182 395 aaPredicted RBP6.58□□□□□ -1.36
CACNA1C-229ENST00000496818 MBTPS1Q14703 1052 aa6.58□□□□□ -1.36
CACNA1C-229ENST00000496818 TCTN1Q2MV58 587 aa6.58□□□□□ -1.36
CACNA1C-229ENST00000496818 TCEAL5Q5H9L2 206 aa6.58□□□□□ -1.36
CACNA1C-229ENST00000496818 MEI1Q5TIA1 1274 aa6.58□□□□□ -1.36
CACNA1C-229ENST00000496818 TAF2Q6P1X5 1199 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms