RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 CDK5RAP3Q96JB5 506 aa7.74□□□□□ -1.17
TOP3A-207ENST00000493648 IFT74Q96LB3 600 aa7.74□□□□□ -1.17
TOP3A-207ENST00000493648 C11orf84Q9BUA3 381 aaPredicted RBP7.74□□□□□ -1.17
TOP3A-207ENST00000493648 NFKBIZQ9BYH8 718 aa7.74□□□□□ -1.17
TOP3A-207ENST00000493648 TMEM117Q9H0C3 514 aa7.74□□□□□ -1.17
TOP3A-207ENST00000493648 NT5C3AQ9H0P0 336 aa7.74□□□□□ -1.17
TOP3A-207ENST00000493648 POLR3FQ9H1D9 316 aaPredicted RBP7.74□□□□□ -1.17
TOP3A-207ENST00000493648 BHMT2Q9H2M3 363 aa7.74□□□□□ -1.17
TOP3A-207ENST00000493648 RC3H2Q9HBD1 1191 aaKnown RBP7.74□□□□□ -1.17
TOP3A-207ENST00000493648 AGPAT5Q9NUQ2 364 aa7.74□□□□□ -1.17
TOP3A-207ENST00000493648 PCDHB12Q9Y5F1 795 aa7.74□□□□□ -1.17
TOP3A-207ENST00000493648 MTCH2Q9Y6C9 303 aa7.74□□□□□ -1.17
TOP3A-207ENST00000493648 LAMA2P24043 3122 aaKnown RBP7.74□□□□□ -1.17
TOP3A-207ENST00000493648 SZT2Q5T011 3432 aa7.74□□□□□ -1.17
TOP3A-207ENST00000493648 RALGAPA2Q2PPJ7 1873 aa7.73□□□□□ -1.17
TOP3A-207ENST00000493648 NLRC5Q86WI3 1866 aa7.73□□□□□ -1.17
TOP3A-207ENST00000493648 LRRIQ4A6NIV6 560 aa7.73□□□□□ -1.17
TOP3A-207ENST00000493648 PP2D1A8MPX8 630 aa7.73□□□□□ -1.17
TOP3A-207ENST00000493648 E9PMD0 336 aa7.73□□□□□ -1.17
TOP3A-207ENST00000493648 ZNF623O75123 536 aa7.73□□□□□ -1.17
TOP3A-207ENST00000493648 FGFR1P11362 822 aa7.73□□□□□ -1.17
TOP3A-207ENST00000493648 LONP1P36776 959 aaKnown RBP7.73□□□□□ -1.17
TOP3A-207ENST00000493648 UBA7P41226 1012 aa7.73□□□□□ -1.17
TOP3A-207ENST00000493648 NAMPTP43490 491 aa7.73□□□□□ -1.17
TOP3A-207ENST00000493648 GATMP50440 423 aa7.73□□□□□ -1.17
TOP3A-207ENST00000493648 RESTQ13127 1097 aa7.73□□□□□ -1.17
TOP3A-207ENST00000493648 CAPSQ13938 189 aa7.73□□□□□ -1.17
TOP3A-207ENST00000493648 SKIV2LQ15477 1246 aaKnown RBP7.73□□□□□ -1.17
TOP3A-207ENST00000493648 CSPP1Q1MSJ5 1256 aa7.73□□□□□ -1.17
TOP3A-207ENST00000493648 NOTUMQ6P988 496 aa7.73□□□□□ -1.17
TOP3A-207ENST00000493648 CABP7Q86V35 215 aa7.73□□□□□ -1.17
TOP3A-207ENST00000493648 ZBTB8OSQ8IWT0 167 aa7.73□□□□□ -1.17
TOP3A-207ENST00000493648 CNNM3Q8NE01 707 aa7.73□□□□□ -1.17
TOP3A-207ENST00000493648 DEPTORQ8TB45 409 aa7.73□□□□□ -1.17
TOP3A-207ENST00000493648 KIFAP3Q92845 792 aa7.73□□□□□ -1.17
TOP3A-207ENST00000493648 P2RX5Q93086 422 aa7.73□□□□□ -1.17
TOP3A-207ENST00000493648 CALML4Q96GE6 196 aa7.73□□□□□ -1.17
TOP3A-207ENST00000493648 MMTAG2Q9BU76 263 aaKnown RBP7.73□□□□□ -1.17
TOP3A-207ENST00000493648 LMAN2LQ9H0V9 348 aa7.73□□□□□ -1.17
TOP3A-207ENST00000493648 C2orf40Q9H1Z8 148 aa7.73□□□□□ -1.17
TOP3A-207ENST00000493648 MINDY3Q9H8M7 445 aa7.73□□□□□ -1.17
TOP3A-207ENST00000493648 GPRC5CQ9NQ84 441 aa7.73□□□□□ -1.17
TOP3A-207ENST00000493648 FAM105AQ9NUU6 356 aa7.73□□□□□ -1.17
TOP3A-207ENST00000493648 PRMT7Q9NVM4 692 aaPredicted RBP7.73□□□□□ -1.17
TOP3A-207ENST00000493648 KCNG1Q9UIX4 513 aa7.73□□□□□ -1.17
TOP3A-207ENST00000493648 MTMR6Q9Y217 621 aa7.73□□□□□ -1.17
TOP3A-207ENST00000493648 MRPL42Q9Y6G3 142 aaKnown RBP7.73□□□□□ -1.17
TOP3A-207ENST00000493648 COL4A6Q14031 1691 aa7.73□□□□□ -1.17
TOP3A-207ENST00000493648 FNDC1Q4ZHG4 1894 aaPredicted RBP7.72□□□□□ -1.17
TOP3A-207ENST00000493648 CARNS1A5YM72 827 aa7.72□□□□□ -1.17
TOP3A-207ENST00000493648 SSBP05455 408 aaKnown RBP eCLIP7.72□□□□□ -1.17
TOP3A-207ENST00000493648 LINC00271P0C7V0 271 aa7.72□□□□□ -1.17
TOP3A-207ENST00000493648 LAG3P18627 525 aa7.72□□□□□ -1.17
TOP3A-207ENST00000493648 HOXA11P31270 313 aaPredicted RBP7.72□□□□□ -1.17
TOP3A-207ENST00000493648 CEBPZQ03701 1054 aaKnown RBP7.72□□□□□ -1.17
TOP3A-207ENST00000493648 MBTD1Q05BQ5 628 aa7.72□□□□□ -1.17
TOP3A-207ENST00000493648 HYIQ5T013 277 aa7.72□□□□□ -1.17
TOP3A-207ENST00000493648 RINT1Q6NUQ1 792 aa7.72□□□□□ -1.17
TOP3A-207ENST00000493648 GLB1LQ6UWU2 654 aa7.72□□□□□ -1.17
TOP3A-207ENST00000493648 MRPL10Q7Z7H8 261 aaKnown RBP7.72□□□□□ -1.17
TOP3A-207ENST00000493648 ZNF598Q86UK7 904 aaKnown RBP7.72□□□□□ -1.17
TOP3A-207ENST00000493648 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.72□□□□□ -1.17
TOP3A-207ENST00000493648 RASSF8Q8NHQ8 419 aa7.72□□□□□ -1.17
TOP3A-207ENST00000493648 HELQQ8TDG4 1101 aa7.72□□□□□ -1.17
TOP3A-207ENST00000493648 MRPL38Q96DV4 380 aaKnown RBP7.72□□□□□ -1.17
TOP3A-207ENST00000493648 CCDC51Q96ER9 411 aa7.72□□□□□ -1.17
TOP3A-207ENST00000493648 ZNF396Q96N95 335 aaPredicted RBP7.72□□□□□ -1.17
TOP3A-207ENST00000493648 CASD1Q96PB1 797 aa7.72□□□□□ -1.17
TOP3A-207ENST00000493648 PLIN2Q99541 437 aa7.72□□□□□ -1.17
TOP3A-207ENST00000493648 TIPINQ9BVW5 301 aa7.72□□□□□ -1.17
TOP3A-207ENST00000493648 MRPL9Q9BYD2 267 aaKnown RBP7.72□□□□□ -1.17
TOP3A-207ENST00000493648 TRIM6Q9C030 488 aaPredicted RBP7.72□□□□□ -1.17
TOP3A-207ENST00000493648 UBN1Q9NPG3 1134 aa7.72□□□□□ -1.17
TOP3A-207ENST00000493648 TYW1Q9NV66 732 aaKnown RBP7.72□□□□□ -1.17
TOP3A-207ENST00000493648 KANSL3Q9P2N6 904 aa7.72□□□□□ -1.17
TOP3A-207ENST00000493648 DAXXQ9UER7 740 aaPredicted RBP7.72□□□□□ -1.17
TOP3A-207ENST00000493648 CCDC39Q9UFE4 941 aa7.72□□□□□ -1.17
TOP3A-207ENST00000493648 PLAGL2Q9UPG8 496 aa7.72□□□□□ -1.17
TOP3A-207ENST00000493648 PCDHB2Q9Y5E7 798 aa7.72□□□□□ -1.17
TOP3A-207ENST00000493648 CLIC4Q9Y696 253 aa7.72□□□□□ -1.17
TOP3A-207ENST00000493648 A0A1B0GUA9 196 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 CCDC169A6NNP5 214 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 K7ERI5 159 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 TSPAN1O60635 241 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 PLA2G4BP0C869 781 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 ITGA4P13612 1032 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 ARF4P18085 180 aaPredicted RBP7.71□□□□□ -1.18
TOP3A-207ENST00000493648 NCLP19338 710 aaKnown RBP7.71□□□□□ -1.18
TOP3A-207ENST00000493648 GUCY2CP25092 1073 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 MARCKSP29966 332 aaPredicted RBP7.71□□□□□ -1.18
TOP3A-207ENST00000493648 TXLNAP40222 546 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 ALDH7A1P49419 539 aaKnown RBP7.71□□□□□ -1.18
TOP3A-207ENST00000493648 EFNA5P52803 228 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 KRT17Q04695 432 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 UBE3AQ05086 875 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 PRPF4BQ13523 1007 aaKnown RBP7.71□□□□□ -1.18
TOP3A-207ENST00000493648 SLC39A14Q15043 492 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 PTPAQ15257 358 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 MAPK6Q16659 721 aa7.71□□□□□ -1.18
TOP3A-207ENST00000493648 FAM187BQ17R55 369 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms