RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 GYG1P46976 350 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 OCRLQ01968 901 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 MCL1Q07820 350 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 IFRD2Q12894 506 aaPredicted RBP6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 KBTBD12Q3ZCT8 623 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 USP38Q8NB14 1042 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 MYCBPAPQ8TBZ2 947 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 FAM149B1Q96BN6 582 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 CYFIP2Q96F07 1278 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 CALN1Q9BXU9 219 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 YIPF3Q9GZM5 350 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 C2orf40Q9H1Z8 148 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 LRRC4Q9HBW1 653 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 TOPORSQ9NS56 1045 aaPredicted RBP6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 PLA2R1Q13018 1463 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 ARAP3Q8WWN8 1544 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 GOLGA8IPA6NC78 632 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 H0YIN7 160 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 PSMD3O43242 534 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 PHF2O75151 1096 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 RPS6KA5O75582 802 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 IGKV5-2P06315 115 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 P4HBP07237 508 aaKnown RBP6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 COPB2P35606 906 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 AARSP49588 968 aaKnown RBP eCLIP6.54□□□□□ -1.369e-6■□□□□ 8.7
PRPF4B-205ENST00000480058 BCAR1P56945 870 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 ACTR2P61160 394 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 RASGRF1Q13972 1273 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 AASDHQ4L235 1098 aaPredicted RBP6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 MOXD1Q6UVY6 613 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 SMYD4Q8IYR2 804 aaPredicted RBP6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 PBXIP1Q96AQ6 731 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 PKD2L2Q9NZM6 624 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 NDUFB9Q9Y6M9 179 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 UGGT1Q9NYU2 1555 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 GTPBP10A4D1E9 387 aaKnown RBP6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 LRRC10BA6NIK2 292 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 TOM1L1O75674 476 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 PSAPP07602 524 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 ASNSP08243 561 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 EEF1B2P24534 225 aaKnown RBP6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 SDC4P31431 198 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 DEFA1P59665 94 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 DEFA3P59666 94 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 COPS2P61201 443 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 INPP5AQ14642 412 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 DIXDC1Q155Q3 683 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 FAM47EQ6ZV65 393 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 FAM9CQ8IZT9 166 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 PGM2Q96G03 612 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 CEP170P1Q96L14 293 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 DNAJC7Q99615 494 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 TEX12Q9BXU0 123 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 ASPSCR1Q9BZE9 553 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 TRABDQ9H4I3 376 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 NOD1Q9Y239 953 aa6.54□□□□□ -1.36
PRPF4B-205ENST00000480058 PXDNLA1KZ92 1463 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 CXCR5P32302 372 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 NDUFAF2Q8N183 169 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 LARGE2Q8N3Y3 721 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 SAMD3Q8N6K7 520 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 PCYOX1LQ8NBM8 494 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 ZNF564Q8TBZ8 553 aaPredicted RBP6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 ZNF526Q8TF50 670 aaPredicted RBP6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 PIGSQ96S52 555 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 ISCA1Q9BUE6 129 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 COA1Q9GZY4 146 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 ATP6V0A4Q9HBG4 840 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 PSMC3IPQ9P2W1 217 aaPredicted RBP6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 ZNF212Q9UDV6 495 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 CDY2AQ9Y6F7 541 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 CDY1Q9Y6F8 540 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 RTN2O75298 545 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 EFNA5P52803 228 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 RC3H1Q5TC82 1133 aaKnown RBP6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 REXO1L1PQ8IX06 675 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 IL17RAQ96F46 866 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 KCNF1Q9H3M0 494 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 TFCP2L1Q9NZI6 479 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 WARS2Q9UGM6 360 aaKnown RBP6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 POTEB3A0JP26 581 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 TYW5A2RUC4 315 aaKnown RBP6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 ALAS1P13196 640 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 GTF2IP78347 998 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 ARHGEF16Q5VV41 709 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 POTEBQ6S5H4 581 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 RSRC2Q7L4I2 434 aaKnown RBP6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 RASSF3Q86WH2 238 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 RCOR2Q8IZ40 523 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 CXorf38Q8TB03 319 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 ATP6V1E2Q96A05 226 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 SEC16BQ96JE7 1060 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 AGXT2Q9BYV1 514 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 TUFT1Q9NNX1 390 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 GINM1Q9NU53 330 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 HPSEQ9Y251 543 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 A0A0A6YYK5 440 aaPredicted RBP6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 SKOR1P84550 965 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 P3H1Q32P28 736 aa6.53□□□□□ -1.36
PRPF4B-205ENST00000480058 RSPH3Q86UC2 560 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms