RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 NYXQ9GZU5 481 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 EHD4Q9H223 541 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 TMEM60Q9H2L4 133 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 CTTNBP2NLQ9P2B4 639 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 ANKIB1Q9P2G1 1089 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 KLHL14Q9P2G3 628 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 ADAMTS1Q9UHI8 967 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 PLIN4Q96Q06 1357 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 A0A087X0T9 212 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 ESYT3A0FGR9 886 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 FRMD3A2A2Y4 597 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 ANKRD62A6NC57 917 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 RASGRF2O14827 1237 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 EIF3DO15371 548 aaKnown RBP eCLIP8.65□□□□□ -1.02
CCDC93-208ENST00000474546 SNX3O60493 162 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 PHF2O75151 1096 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 EYA4O95677 639 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 KRT18P05783 430 aaKnown RBP8.65□□□□□ -1.02
CCDC93-208ENST00000474546 SLC10A3P09131 477 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 FAM228BP0C875 321 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 UCHL3P15374 230 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 BRD2P25440 801 aaKnown RBP8.65□□□□□ -1.02
CCDC93-208ENST00000474546 BMP8BP34820 402 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 GCKP35557 465 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 TECP42680 631 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 KLK7P49862 253 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 PPP4CP60510 307 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 KCNMA1Q12791 1236 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 KCNH2Q12809 1159 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 GRIK3Q13003 919 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 MAPK7Q13164 816 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 GRB10Q13322 594 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 LBRQ14739 615 aaKnown RBP8.65□□□□□ -1.02
CCDC93-208ENST00000474546 PPP2R5AQ15172 486 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 UAP1Q16222 522 aaPredicted RBP8.65□□□□□ -1.02
CCDC93-208ENST00000474546 BMT2Q1RMZ1 405 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 RNF43Q68DV7 783 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 FAM109BQ6ICB4 259 aaPredicted RBP8.65□□□□□ -1.02
CCDC93-208ENST00000474546 FBXO33Q7Z6M2 555 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 NT5DC3Q86UY8 548 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 SESTD1Q86VW0 696 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 DZIP1Q86YF9 867 aaKnown RBP8.65□□□□□ -1.02
CCDC93-208ENST00000474546 ARHGAP18Q8N392 663 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 ZNF398Q8TD17 642 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 TBCKQ8TEA7 893 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 KLHL29Q96CT2 875 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 FAM81BQ96LP2 452 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 PSMB7Q99436 277 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 WNT8AQ9H1J5 351 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 NLRC4Q9NPP4 1024 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 EMILIN3Q9NT22 766 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 BLOC1S4Q9NUP1 217 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 MCM9Q9NXL9 1143 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 NKIRAS1Q9NYS0 192 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 EHD2Q9NZN4 543 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 KCND2Q9NZV8 630 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 LARSQ9P2J5 1176 aaKnown RBP8.65□□□□□ -1.02
CCDC93-208ENST00000474546 SEL1LQ9UBV2 794 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 NENFQ9UMX5 172 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 TRIM17Q9Y577 477 aa8.65□□□□□ -1.02
CCDC93-208ENST00000474546 LRRD1A4D1F6 860 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 WNT7AO00755 349 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 P4HA2O15460 535 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 DAPK3O43293 454 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 NOL4O94818 638 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 GJB6O95452 261 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 ANP32DO95626 131 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 TTLL1O95922 423 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 FESP07332 822 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 BCRP11274 1271 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 CCNB1P14635 433 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 CHN1P15882 459 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 CNGA1P29973 690 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 PTK2Q05397 1052 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 BNIP1Q12981 228 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 AP3B2Q13367 1082 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 DYNC1I2Q13409 638 aaKnown RBP8.64□□□□□ -1.03
CCDC93-208ENST00000474546 ALCAMQ13740 583 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 BLMHQ13867 455 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 HLFQ16534 295 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 SGSM1Q2NKQ1 1148 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 SLC4A8Q2Y0W8 1093 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 TNFAIP8L3Q5GJ75 292 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 WASHC2DQ5SRD0 308 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 GPATCH4Q5T3I0 446 aaKnown RBP8.64□□□□□ -1.03
CCDC93-208ENST00000474546 IRF2BP2Q7Z5L9 587 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 ANKRD35Q8N283 1001 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 METTL13Q8N6R0 699 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 C2orf69Q8N8R5 385 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 FAM133AQ8N9E0 248 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 C12orf50Q8NA57 414 aaPredicted RBP8.64□□□□□ -1.03
CCDC93-208ENST00000474546 NEDD1Q8NHV4 660 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 NKX2-3Q8TAU0 364 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 NSMCE1Q8WV22 266 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 ZFAND2BQ8WV99 257 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 PIGBQ92521 554 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 FAXDC2Q96IV6 333 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 SELENOSQ9BQE4 189 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 STK33Q9BYT3 514 aa8.64□□□□□ -1.03
CCDC93-208ENST00000474546 GLIS2Q9BZE0 524 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms