RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 CCDC114Q96M63 670 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 PNMA5Q96PV4 448 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 MTMR9Q96QG7 549 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 RPAP3Q9H6T3 665 aaPredicted RBP10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 TXNRD2Q9NNW7 524 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 FBXL5Q9UKA1 691 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 DAAM1Q9Y4D1 1078 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 MGAMO43451 1857 aa10.89□□□□□ -0.67
CHCHD4P3-201ENST00000455954 POTEFA5A3E0 1075 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 CFAP73A6NFT4 308 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 BUB1O43683 1085 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 ADCY3O60266 1144 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 NOL4O94818 638 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 ECHS1P30084 290 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 PRKCIP41743 596 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 PSEN1P49768 467 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 ERVK-9P63128 1117 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 ATP2B2Q01814 1243 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 IFT88Q13099 833 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 ITIH4Q14624 930 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 COG2Q14746 738 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 CRYMQ14894 314 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 EDRF1Q3B7T1 1238 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 Q3C1V9 767 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 HYIQ5T013 277 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 GKAP1Q5VSY0 366 aaPredicted RBP10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 TTC19Q6DKK2 380 aaPredicted RBP10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 CYB5D1Q6P9G0 228 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 LBX2Q6XYB7 198 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 HEATR3Q7Z4Q2 680 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 CLEC10AQ8IUN9 316 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 FMNL3Q8IVF7 1028 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 FUKQ8N0W3 1084 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 RASGRP4Q8TDF6 673 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 TLCD1Q96CP7 247 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 MS4A14Q96JA4 679 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 LSM14BQ9BX40 385 aaKnown RBP10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 GANQ9H2C0 597 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 SLC39A2Q9NP94 309 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 HOXC10Q9NYD6 342 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 EHD2Q9NZN4 543 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 SUCLA2Q9P2R7 463 aaPredicted RBP10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 BIN2Q9UBW5 565 aaPredicted RBP10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 DDX20Q9UHI6 824 aaKnown RBP10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 NENFQ9UMX5 172 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 RABGAP1Q9Y3P9 1069 aa10.88□□□□□ -0.67
CHCHD4P3-201ENST00000455954 CLGNO14967 610 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 ASAP2O43150 1006 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 CCNT1O60563 726 aaKnown RBP10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 PEX10O60683 326 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 MYCP01106 439 aaPredicted RBP10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 GCFC2P16383 781 aaKnown RBP10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 KLRC1P26715 233 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 MAPK4P31152 587 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 GUCY2FP51841 1108 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 NAPAP54920 295 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 UBXN2AP68543 259 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 CCNA1P78396 465 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 TFAP4Q01664 338 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 KLHL30Q0D2K2 578 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 RIPK1Q13546 671 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 HLTFQ14527 1009 aaKnown RBP eCLIP10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 UAP1Q16222 522 aaPredicted RBP10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 CALCRLQ16602 461 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 FAM47AQ5JRC9 791 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 KIAA1755Q5JYT7 1200 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 KRT79Q5XKE5 535 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 POTEEQ6S8J3 1075 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 CRELD2Q6UXH1 353 aaPredicted RBP10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 SLFN11Q7Z7L1 901 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 LRRC57Q8N9N7 239 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 ZBTB9Q96C00 473 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 SEC16BQ96JE7 1060 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 JPH2Q9BR39 696 aaPredicted RBP10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 FAM129AQ9BZQ8 928 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 TANGO6Q9C0B7 1094 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 RAB17Q9H0T7 212 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 CCDC134Q9H6E4 229 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 GOPCQ9HD26 462 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 BMP2KQ9NSY1 1161 aaPredicted RBP10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 SMARCAL1Q9NZC9 954 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 NYAP2Q9P242 653 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 GJD2Q9UKL4 321 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 ODF2LQ9ULJ1 636 aa10.87□□□□□ -0.67
CHCHD4P3-201ENST00000455954 A0A1B0GUA9 196 aa10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 FAM187AA6NFU0 413 aa10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 SPDYE16A6NNV3 312 aaPredicted RBP10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 WDR46O15213 610 aaKnown RBP10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 SART1O43290 800 aaKnown RBP10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 CYTH3O43739 400 aa10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 MGRN1O60291 552 aa10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 NMT2O60551 498 aa10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 PPFIA2O75334 1257 aa10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 CNMDO75829 334 aa10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 NUDT17P0C025 328 aa10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 DRD4P21917 467 aa10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 CTNNA1P35221 906 aaKnown RBP10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 SCTRP47872 440 aa10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 NOVP48745 357 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms