RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 SLC35C1Q96A29 364 aa7.47□□□□□ -1.21
ECHDC1-210ENST00000454859 MAML3Q96JK9 1138 aa7.47□□□□□ -1.21
ECHDC1-210ENST00000454859 ZNF830Q96NB3 372 aaPredicted RBP7.47□□□□□ -1.21
ECHDC1-210ENST00000454859 TINF2Q9BSI4 451 aa7.47□□□□□ -1.21
ECHDC1-210ENST00000454859 KATNBL1Q9H079 304 aa7.47□□□□□ -1.21
ECHDC1-210ENST00000454859 HAUS4Q9H6D7 363 aa7.47□□□□□ -1.21
ECHDC1-210ENST00000454859 ZNF408Q9H9D4 720 aa7.47□□□□□ -1.21
ECHDC1-210ENST00000454859 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.47□□□□□ -1.21
ECHDC1-210ENST00000454859 PKD2L1Q9P0L9 805 aa7.47□□□□□ -1.21
ECHDC1-210ENST00000454859 PPP2R2CQ9Y2T4 447 aa7.47□□□□□ -1.21
ECHDC1-210ENST00000454859 KAT6AQ92794 2004 aa7.46□□□□□ -1.21
ECHDC1-210ENST00000454859 PES1O00541 588 aaKnown RBP7.46□□□□□ -1.21
ECHDC1-210ENST00000454859 EXOC3O60645 756 aa7.46□□□□□ -1.21
ECHDC1-210ENST00000454859 IGHA2P01877 340 aa7.46□□□□□ -1.21
ECHDC1-210ENST00000454859 SERPING1P05155 500 aa7.46□□□□□ -1.21
ECHDC1-210ENST00000454859 RGS2P41220 211 aa7.46□□□□□ -1.21
ECHDC1-210ENST00000454859 PEX3P56589 373 aa7.46□□□□□ -1.21
ECHDC1-210ENST00000454859 ETF1P62495 437 aaKnown RBP7.46□□□□□ -1.21
ECHDC1-210ENST00000454859 NKX3-2P78367 333 aa7.46□□□□□ -1.21
ECHDC1-210ENST00000454859 CLDN10P78369 228 aa7.46□□□□□ -1.21
ECHDC1-210ENST00000454859 ARHGAP1Q07960 439 aa7.46□□□□□ -1.21
ECHDC1-210ENST00000454859 BFSP1Q12934 665 aa7.46□□□□□ -1.21
ECHDC1-210ENST00000454859 FAM187BQ17R55 369 aa7.46□□□□□ -1.21
ECHDC1-210ENST00000454859 EXOC3L4Q17RC7 722 aa7.46□□□□□ -1.21
ECHDC1-210ENST00000454859 DLK2Q6UY11 383 aa7.46□□□□□ -1.21
ECHDC1-210ENST00000454859 APBB1IPQ7Z5R6 666 aaPredicted RBP7.46□□□□□ -1.21
ECHDC1-210ENST00000454859 IFNL1Q8IU54 200 aa7.46□□□□□ -1.21
ECHDC1-210ENST00000454859 ANKRD13CQ8N6S4 541 aa7.46□□□□□ -1.21
ECHDC1-210ENST00000454859 PPP1R13BQ96KQ4 1090 aa7.46□□□□□ -1.21
ECHDC1-210ENST00000454859 MFSD14AQ96MC6 490 aa7.46□□□□□ -1.21
ECHDC1-210ENST00000454859 PCMTD1Q96MG8 357 aaPredicted RBP7.46□□□□□ -1.21
ECHDC1-210ENST00000454859 SPATA33Q96N06 139 aa7.46□□□□□ -1.21
ECHDC1-210ENST00000454859 PURBQ96QR8 312 aaKnown RBP7.46□□□□□ -1.21
ECHDC1-210ENST00000454859 TSPAN18Q96SJ8 248 aa7.46□□□□□ -1.21
ECHDC1-210ENST00000454859 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.46□□□□□ -1.21
ECHDC1-210ENST00000454859 ADGRG1Q9Y653 693 aa7.46□□□□□ -1.21
ECHDC1-210ENST00000454859 EPN1Q9Y6I3 576 aaPredicted RBP7.46□□□□□ -1.21
ECHDC1-210ENST00000454859 RBAK-RBAKDNI3L0D1 243 aa7.46□□□□□ -1.22
ECHDC1-210ENST00000454859 ADCY3O60266 1144 aa7.46□□□□□ -1.22
ECHDC1-210ENST00000454859 AKAP3O75969 853 aa7.46□□□□□ -1.22
ECHDC1-210ENST00000454859 POTEJP0CG39 1038 aa7.46□□□□□ -1.22
ECHDC1-210ENST00000454859 CYP2C8P10632 490 aa7.46□□□□□ -1.22
ECHDC1-210ENST00000454859 PRKCIP41743 596 aa7.46□□□□□ -1.22
ECHDC1-210ENST00000454859 ADKP55263 362 aaKnown RBP7.46□□□□□ -1.22
ECHDC1-210ENST00000454859 RAD51AP2Q09MP3 1159 aa7.46□□□□□ -1.22
ECHDC1-210ENST00000454859 SLC9C1Q4G0N8 1177 aa7.46□□□□□ -1.22
ECHDC1-210ENST00000454859 PPP1R2P3Q6NXS1 205 aa7.46□□□□□ -1.22
ECHDC1-210ENST00000454859 PDXDC1Q6P996 788 aa7.46□□□□□ -1.22
ECHDC1-210ENST00000454859 CACNA2D4Q7Z3S7 1137 aa7.46□□□□□ -1.22
ECHDC1-210ENST00000454859 VPS36Q86VN1 386 aa7.46□□□□□ -1.22
ECHDC1-210ENST00000454859 ZBTB8OSQ8IWT0 167 aa7.46□□□□□ -1.22
ECHDC1-210ENST00000454859 GLIS3Q8NEA6 775 aa7.46□□□□□ -1.22
ECHDC1-210ENST00000454859 DEPTORQ8TB45 409 aa7.46□□□□□ -1.22
ECHDC1-210ENST00000454859 PSPC1Q8WXF1 523 aaKnown RBP7.46□□□□□ -1.22
ECHDC1-210ENST00000454859 PCYT2Q99447 389 aa7.46□□□□□ -1.22
ECHDC1-210ENST00000454859 FGFBP2Q9BYJ0 223 aa7.46□□□□□ -1.22
ECHDC1-210ENST00000454859 POLR3FQ9H1D9 316 aaPredicted RBP7.46□□□□□ -1.22
ECHDC1-210ENST00000454859 EFCC1Q9HA90 598 aa7.46□□□□□ -1.22
ECHDC1-210ENST00000454859 XPNPEP1Q9NQW7 623 aa7.46□□□□□ -1.22
ECHDC1-210ENST00000454859 INTUQ9ULD6 942 aa7.46□□□□□ -1.22
ECHDC1-210ENST00000454859 COQ4Q9Y3A0 265 aa7.46□□□□□ -1.22
ECHDC1-210ENST00000454859 A0A0U1RQG5 324 aaPredicted RBP7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 DENND3A2RUS2 1198 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 ZBTB39O15060 712 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 CA12O43570 354 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 EXTL3O43909 919 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 COBLO75128 1261 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 NDUFA10O95299 355 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 GNRH1P01148 92 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 TNNT1P13805 278 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 FERP16591 822 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 ATP4AP20648 1035 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 TMOD1P28289 359 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 CNGA1P29973 690 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 GTF2F1P35269 517 aaKnown RBP eCLIP7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 FMO5P49326 533 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 VAMP7P51809 220 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 NPEPPSP55786 919 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 KCNMA1Q12791 1236 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 TAF1CQ15572 869 aaPredicted RBP7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 HSP90AA4PQ58FG1 418 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 DNTTIP2Q5QJE6 756 aaKnown RBP7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 UTP14CQ5TAP6 766 aaKnown RBP7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 SFMBT2Q5VUG0 894 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 REXO1L1PQ8IX06 675 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 GLG1Q92896 1179 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 APBA2Q99767 749 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 PTPN18Q99952 460 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 MMRN2Q9H8L6 949 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 NMRK2Q9NPI5 230 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 HSPBP1Q9NZL4 362 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 TMEM88BA6NKF7 163 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 CCDC169A6NNP5 214 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 BTNL10A8MVZ5 291 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 K7ERI5 159 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 KRT86O43790 486 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 PGK2P07205 417 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 ACVR2BQ13705 512 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 PLCB4Q15147 1175 aa7.45□□□□□ -1.22
ECHDC1-210ENST00000454859 SPA17Q15506 151 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms