RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 EDN1P05305 212 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 GJB1P08034 283 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 SCP2P22307 547 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 RPL13P26373 211 aaKnown RBP6.58□□□□□ -1.36
SDC4P-201ENST00000453285 CNGA1P29973 690 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 ADSSP30520 456 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 HOXC8P31273 242 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 MTIF2P46199 727 aaKnown RBP6.58□□□□□ -1.36
SDC4P-201ENST00000453285 PSEN2P49810 448 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 CPT1AP50416 773 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 DNM2P50570 870 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 IGBP1P78318 339 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 PURAQ00577 322 aaKnown RBP6.58□□□□□ -1.36
SDC4P-201ENST00000453285 POU5F1BQ06416 359 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 LAMTOR4Q0VGL1 99 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 MXD4Q14582 209 aaPredicted RBP6.58□□□□□ -1.36
SDC4P-201ENST00000453285 MFSD10Q14728 455 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 PPP2R5AQ15172 486 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 GRIK4Q16099 956 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 FSCN1Q16658 493 aaKnown RBP6.58□□□□□ -1.36
SDC4P-201ENST00000453285 MAN2A1Q16706 1144 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 VWA3BQ502W6 1294 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 CEP135Q66GS9 1140 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 CDCA2Q69YH5 1023 aaPredicted RBP6.58□□□□□ -1.36
SDC4P-201ENST00000453285 CCSAPQ6IQ19 270 aaPredicted RBP6.58□□□□□ -1.36
SDC4P-201ENST00000453285 ARMCX5Q6P1M9 558 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 CREBRFQ8IUR6 639 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 SYCP3Q8IZU3 236 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 ZSWIM2Q8NEG5 633 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 KLHDC9Q8NEP7 349 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 ANKRD20A12PQ8NF67 263 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 GOLGA5Q8TBA6 731 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 PXYLP1Q8TE99 480 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 CACTINQ8WUQ7 758 aaKnown RBP6.58□□□□□ -1.36
SDC4P-201ENST00000453285 PSPC1Q8WXF1 523 aaKnown RBP6.58□□□□□ -1.36
SDC4P-201ENST00000453285 ERO1AQ96HE7 468 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 ZNF830Q96NB3 372 aaPredicted RBP6.58□□□□□ -1.36
SDC4P-201ENST00000453285 ERGIC2Q96RQ1 377 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 JPH2Q9BR39 696 aaPredicted RBP6.58□□□□□ -1.36
SDC4P-201ENST00000453285 CBWD1Q9BRT8 395 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 MKNK1Q9BUB5 465 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 NOC4LQ9BVI4 516 aaKnown RBP6.58□□□□□ -1.36
SDC4P-201ENST00000453285 HAPLN2Q9GZV7 340 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 CCDC113Q9H0I3 377 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 KCNF1Q9H3M0 494 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 NDST4Q9H3R1 872 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 SUCLA2Q9P2R7 463 aaPredicted RBP6.58□□□□□ -1.36
SDC4P-201ENST00000453285 ZNF215Q9UL58 517 aaPredicted RBP6.58□□□□□ -1.36
SDC4P-201ENST00000453285 STYXL1Q9Y6J8 313 aa6.58□□□□□ -1.36
SDC4P-201ENST00000453285 NRCAMQ92823 1304 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 MBLAC1A4D2B0 266 aaPredicted RBP6.57□□□□□ -1.36
SDC4P-201ENST00000453285 RRN3P2A6NIE6 340 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 LRRIQ4A6NIV6 560 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 TTLL13PA6NNM8 815 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 GOLGA6L6A8MZA4 724 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 K7ERI5 159 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 RNF225M0QZC1 329 aaPredicted RBP6.57□□□□□ -1.36
SDC4P-201ENST00000453285 MSCO60682 206 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 KPNA6O60684 536 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 PGK1P00558 417 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 HMGCRP04035 888 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 PTMAP06454 111 aaKnown RBP6.57□□□□□ -1.36
SDC4P-201ENST00000453285 TPM3P06753 285 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 MYL3P08590 195 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 SRGAP2CP0DJJ0 459 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 SMIM10L2AP0DMW4 78 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 SMIM10L2BP0DMW5 78 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 PRKAR2AP13861 404 aaKnown RBP6.57□□□□□ -1.36
SDC4P-201ENST00000453285 PRKCSHP14314 528 aaPredicted RBP6.57□□□□□ -1.36
SDC4P-201ENST00000453285 HSPA6P17066 643 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 ABCD1P33897 745 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 PSMC2P35998 433 aaKnown RBP6.57□□□□□ -1.36
SDC4P-201ENST00000453285 CYP2J2P51589 502 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 CLCN3P51790 818 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 PRMT2P55345 433 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 PTENP60484 403 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 UBXN1Q04323 297 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 KCNMA1Q12791 1236 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 PPFIA1Q13136 1202 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 KIAA0753Q2KHM9 967 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 CCDC40Q4G0X9 1142 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 BRDTQ58F21 947 aaPredicted RBP6.57□□□□□ -1.36
SDC4P-201ENST00000453285 SPECC1LQ69YQ0 1117 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 DPY19L2P1Q6NXN4 242 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 HS2ST1Q7LGA3 356 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 IFNLR1Q8IU57 520 aaPredicted RBP6.57□□□□□ -1.36
SDC4P-201ENST00000453285 LRRC8AQ8IWT6 810 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 KIAA0319LQ8IZA0 1049 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 RNF149Q8NC42 400 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 RETREG2Q8NC44 543 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 DEPTORQ8TB45 409 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 PPP1R13LQ8WUF5 828 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 LMBR1Q8WVP7 490 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 FBXL18Q96ME1 805 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 TMX1Q9H3N1 280 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 FZD8Q9H461 694 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 PCIF1Q9H4Z3 704 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 METTL14Q9HCE5 456 aaKnown RBP6.57□□□□□ -1.36
SDC4P-201ENST00000453285 SETD4Q9NVD3 440 aa6.57□□□□□ -1.36
SDC4P-201ENST00000453285 HSPBP1Q9NZL4 362 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms