RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 JPH1Q9HDC5 661 aaPredicted RBP11.22□□□□□ -0.61
NUP188-201ENST00000372577 CYP26B1Q9NR63 512 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 P4HA2O15460 535 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 OSTNP61366 133 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 SLC18A3Q16572 532 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 RBM43Q6ZSC3 357 aaKnown RBP11.22□□□□□ -0.61
NUP188-201ENST00000372577 RAB44Q7Z6P3 723 aaPredicted RBP11.22□□□□□ -0.61
NUP188-201ENST00000372577 GBP7Q8N8V2 638 aaPredicted RBP11.22□□□□□ -0.61
NUP188-201ENST00000372577 TXLNGQ9NUQ3 528 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 ZNF70Q9UC06 446 aaPredicted RBP11.22□□□□□ -0.61
NUP188-201ENST00000372577 STK38LQ9Y2H1 464 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 MARK3P27448 753 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 SCARA5Q6ZMJ2 495 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 NUP85Q9BW27 656 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 TEX13BQ9BXU2 312 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 JMJD4Q9H9V9 463 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 LRFN2Q9ULH4 789 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 PLAAQ9Y263 795 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 KIF1AQ12756 1690 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 SALL1Q9NSC2 1324 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 SYNJ2BP-COX16A0A087WUM0 186 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 TTI1O43156 1089 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 RPA1P27694 616 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 TMEM270Q6UE05 265 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 RHOT1Q8IXI2 618 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 DPF2Q92785 391 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 MMP19Q99542 508 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 COX16Q9P0S2 106 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 MAD2L2Q9UI95 211 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 PRR12Q9ULL5 1215 aa11.22□□□□□ -0.61
NUP188-201ENST00000372577 EMSYQ7Z589 1322 aa11.21□□□□□ -0.61
NUP188-201ENST00000372577 FAM205CA6NFA0 338 aa11.21□□□□□ -0.61
NUP188-201ENST00000372577 RTN2O75298 545 aa11.21□□□□□ -0.61
NUP188-201ENST00000372577 SNCBQ16143 134 aa11.21□□□□□ -0.61
NUP188-201ENST00000372577 SYDE1Q6ZW31 735 aaPredicted RBP11.21□□□□□ -0.61
NUP188-201ENST00000372577 SRRM1Q8IYB3 904 aaKnown RBP11.21□□□□□ -0.61
NUP188-201ENST00000372577 POLR3CQ9BUI4 534 aaPredicted RBP11.21□□□□□ -0.61
NUP188-201ENST00000372577 Q9H521 79 aa11.21□□□□□ -0.61
NUP188-201ENST00000372577 TAF1DQ9H5J8 278 aaPredicted RBP11.21□□□□□ -0.61
NUP188-201ENST00000372577 MAP3K20Q9NYL2 800 aaKnown RBP11.21□□□□□ -0.61
NUP188-201ENST00000372577 AGO2Q9UKV8 859 aaKnown RBP11.21□□□□□ -0.61
NUP188-201ENST00000372577 USP27XA6NNY8 438 aa11.21□□□□□ -0.61
NUP188-201ENST00000372577 FTLP02792 175 aaPredicted RBP11.21□□□□□ -0.61
NUP188-201ENST00000372577 CHGBP05060 677 aa11.21□□□□□ -0.61
NUP188-201ENST00000372577 GNA15P30679 374 aa11.21□□□□□ -0.61
NUP188-201ENST00000372577 IFNAR2P48551 515 aa11.21□□□□□ -0.61
NUP188-201ENST00000372577 DYNLT1P63172 113 aa11.21□□□□□ -0.61
NUP188-201ENST00000372577 COG7P83436 770 aa11.21□□□□□ -0.61
NUP188-201ENST00000372577 AGPAT1Q99943 283 aa11.21□□□□□ -0.61
NUP188-201ENST00000372577 HINFPQ9BQA5 517 aa11.21□□□□□ -0.61
NUP188-201ENST00000372577 ABL1P00519 1130 aa11.21□□□□□ -0.62
NUP188-201ENST00000372577 CIITAP33076 1130 aa11.21□□□□□ -0.62
NUP188-201ENST00000372577 CASP7P55210 303 aa11.21□□□□□ -0.62
NUP188-201ENST00000372577 PTPAQ15257 358 aa11.21□□□□□ -0.62
NUP188-201ENST00000372577 ATG16L1Q676U5 607 aa11.21□□□□□ -0.62
NUP188-201ENST00000372577 DSTYKQ6XUX3 929 aa11.21□□□□□ -0.62
NUP188-201ENST00000372577 DNAAF3Q8N9W5 541 aa11.21□□□□□ -0.62
NUP188-201ENST00000372577 OR6B3Q8NGW1 331 aa11.21□□□□□ -0.62
NUP188-201ENST00000372577 DNAJC5Q9H3Z4 198 aa11.21□□□□□ -0.62
NUP188-201ENST00000372577 SNX12Q9UMY4 172 aa11.21□□□□□ -0.62
NUP188-201ENST00000372577 TAF6LQ9Y6J9 622 aa11.21□□□□□ -0.62
NUP188-201ENST00000372577 MYOM1P52179 1685 aa11.21□□□□□ -0.62
NUP188-201ENST00000372577 PXDNQ92626 1479 aa11.21□□□□□ -0.62
NUP188-201ENST00000372577 ARHGAP42A6NI28 874 aa11.21□□□□□ -0.62
NUP188-201ENST00000372577 CASQ2O14958 399 aaPredicted RBP11.21□□□□□ -0.62
NUP188-201ENST00000372577 IFT88Q13099 833 aa11.21□□□□□ -0.62
NUP188-201ENST00000372577 DUOXA2Q1HG44 320 aa11.21□□□□□ -0.62
NUP188-201ENST00000372577 AGBL3Q8NEM8 1001 aa11.21□□□□□ -0.62
NUP188-201ENST00000372577 TTC1Q99614 292 aa11.21□□□□□ -0.62
NUP188-201ENST00000372577 KCNF1Q9H3M0 494 aa11.21□□□□□ -0.62
NUP188-201ENST00000372577 EFCC1Q9HA90 598 aa11.21□□□□□ -0.62
NUP188-201ENST00000372577 RBAKQ9NYW8 714 aaPredicted RBP11.21□□□□□ -0.62
NUP188-201ENST00000372577 UVRAGQ9P2Y5 699 aa11.21□□□□□ -0.62
NUP188-201ENST00000372577 APEX2Q9UBZ4 518 aa11.21□□□□□ -0.62
NUP188-201ENST00000372577 RRP15Q9Y3B9 282 aaKnown RBP11.21□□□□□ -0.62
NUP188-201ENST00000372577 MYMKA6NI61 221 aa11.2□□□□□ -0.62
NUP188-201ENST00000372577 KRT37O76014 449 aa11.2□□□□□ -0.62
NUP188-201ENST00000372577 LUC7L3O95232 432 aaKnown RBP11.2□□□□□ -0.62
NUP188-201ENST00000372577 KRT10P13645 584 aa11.2□□□□□ -0.62
NUP188-201ENST00000372577 PLS3P13797 630 aa11.2□□□□□ -0.62
NUP188-201ENST00000372577 KLHL38Q2WGJ6 581 aa11.2□□□□□ -0.62
NUP188-201ENST00000372577 E4F1Q66K89 784 aaPredicted RBP11.2□□□□□ -0.62
NUP188-201ENST00000372577 CERKQ8TCT0 537 aa11.2□□□□□ -0.62
NUP188-201ENST00000372577 RNF139Q8WU17 664 aa11.2□□□□□ -0.62
NUP188-201ENST00000372577 TLK1Q9UKI8 766 aa11.2□□□□□ -0.62
NUP188-201ENST00000372577 LIG3P49916 1009 aa11.2□□□□□ -0.62
NUP188-201ENST00000372577 PLCB4Q15147 1175 aa11.2□□□□□ -0.62
NUP188-201ENST00000372577 MUM1Q2TAK8 710 aa11.2□□□□□ -0.62
NUP188-201ENST00000372577 TRIM56Q9BRZ2 755 aaKnown RBP11.2□□□□□ -0.62
NUP188-201ENST00000372577 EHD4Q9H223 541 aa11.2□□□□□ -0.62
NUP188-201ENST00000372577 CPSF3Q9UKF6 684 aaKnown RBP11.2□□□□□ -0.62
NUP188-201ENST00000372577 RICTORQ6R327 1708 aa11.2□□□□□ -0.62
NUP188-201ENST00000372577 TADA3O75528 432 aa11.2□□□□□ -0.62
NUP188-201ENST00000372577 RFC5P40937 340 aa11.2□□□□□ -0.62
NUP188-201ENST00000372577 THEM5Q8N1Q8 247 aa11.2□□□□□ -0.62
NUP188-201ENST00000372577 SLC16A10Q8TF71 515 aa11.2□□□□□ -0.62
NUP188-201ENST00000372577 REEP2Q9BRK0 252 aa11.2□□□□□ -0.62
NUP188-201ENST00000372577 FAM96AQ9H5X1 160 aa11.2□□□□□ -0.62
NUP188-201ENST00000372577 VIPAS39Q9H9C1 493 aa11.2□□□□□ -0.62
NUP188-201ENST00000372577 PARVAQ9NVD7 372 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms