RNA–Protein interactions for RNA: ENST00000362061.3

CACNA1S-201, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CACNA1S, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-201ENST00000362061 KNOP1Q1ED39 458 aaKnown RBP11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 CEP120Q8N960 986 aa11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 MTA3Q9BTC8 594 aa11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 SPTLC3Q9NUV7 552 aa11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 STK36Q9NRP7 1315 aa11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 TULP4Q9NRJ4 1543 aa11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 TMEM247A6NEH6 219 aa11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 GNGT2O14610 69 aa11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 SNX2O60749 519 aa11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 OR1G1P47890 313 aa11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 ATP1A2P50993 1020 aa11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 ETF1P62495 437 aaKnown RBP11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 HAUS6Q7Z4H7 955 aa11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 STAG2Q8N3U4 1231 aa11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 OXER1Q8TDS5 423 aa11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 SEPT5Q99719 369 aaPredicted RBP11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 PCSK1NQ9UHG2 260 aa11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 TOM1L1O75674 476 aa11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 LARGE1O95461 756 aa11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 LCP1P13796 627 aa11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 AP3M2P53677 418 aa11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 RCAN1P53805 252 aa11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 KRT39Q6A163 491 aa11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 PPP4R4Q6NUP7 873 aa11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 APPL2Q8NEU8 664 aa11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 TMEM143Q96AN5 459 aa11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 PBKQ96KB5 322 aa11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 ZNF512Q96ME7 567 aaPredicted RBP11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 NYAP2Q9P242 653 aa11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 MID2Q9UJV3 735 aa11.29□□□□□ -0.6
CACNA1S-201ENST00000362061 HMGB1P1B2RPK0 211 aaPredicted RBP11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 ASMTLO95671 621 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 CDK17Q00537 523 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 ZNF235Q14590 738 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 SDE2Q6IQ49 451 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 CHST13Q8NET6 341 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 SNX19Q92543 992 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 PBXIP1Q96AQ6 731 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 GINM1Q9NU53 330 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 TTI1O43156 1089 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 CXCR5P32302 372 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 IRX4P78413 519 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 TAF1BQ53T94 588 aaPredicted RBP11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 TRMT2AQ8IZ69 625 aaKnown RBP11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 RBM41Q96IZ5 413 aaKnown RBP11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 IQSEC2Q5JU85 1478 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 E5RI56 91 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 RESTQ13127 1097 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 HP1BP3Q5SSJ5 553 aaPredicted RBP11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 SIRT2Q8IXJ6 389 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 PYROXD1Q8WU10 500 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 AGAP1Q9UPQ3 857 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 ATP8A1Q9Y2Q0 1164 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 PNPLA7Q6ZV29 1317 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 CNTNAP4Q9C0A0 1308 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 GOLGA8KD6RF30 607 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 ARHGAP25P42331 645 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 CFAP61Q8NHU2 1237 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 RRAGCQ9HB90 399 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 PCDHA13Q9Y5I0 950 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 USP42Q9H9J4 1324 aaKnown RBP11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 PVALEFA0A1B0GWK0 134 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 DGAT1O75907 488 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 BAG2O95816 211 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 TAC1P20366 129 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 TGFB2P61812 414 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 ZNF543Q08ER8 600 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 PTK2BQ14289 1009 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 CLEC10AQ8IUN9 316 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 PDZD8Q8NEN9 1154 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 SH3TC2Q8TF17 1288 aa11.28□□□□□ -0.6
CACNA1S-201ENST00000362061 ERCC6L2Q5T890 1561 aa11.27□□□□□ -0.6
CACNA1S-201ENST00000362061 TTC31Q49AM3 519 aaPredicted RBP11.27□□□□□ -0.6
CACNA1S-201ENST00000362061 FAM102AQ5T9C2 384 aaPredicted RBP11.27□□□□□ -0.6
CACNA1S-201ENST00000362061 THEMIS2Q5TEJ8 643 aa11.27□□□□□ -0.6
CACNA1S-201ENST00000362061 C11orf57Q6ZUT1 292 aaPredicted RBP11.27□□□□□ -0.6
CACNA1S-201ENST00000362061 COL23A1Q86Y22 540 aaPredicted RBP11.27□□□□□ -0.6
CACNA1S-201ENST00000362061 RMDN1Q96DB5 314 aa11.27□□□□□ -0.6
CACNA1S-201ENST00000362061 PLA2G12BQ9BX93 195 aa11.27□□□□□ -0.6
CACNA1S-201ENST00000362061 PRR12Q9ULL5 1215 aa11.27□□□□□ -0.6
CACNA1S-201ENST00000362061 SNX9Q9Y5X1 595 aa11.27□□□□□ -0.6
CACNA1S-201ENST00000362061 SETD1BQ9UPS6 1966 aaKnown RBP11.27□□□□□ -0.6
CACNA1S-201ENST00000362061 ZRANB2O95218 330 aaKnown RBP eCLIP11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 ARL4DP49703 201 aa11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 CENPUQ71F23 418 aa11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 TAS2R42Q7RTR8 314 aa11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 SCYL3Q8IZE3 742 aa11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 PROM2Q8N271 834 aa11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 ZKSCAN4Q969J2 545 aaPredicted RBP11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 EPB41L5Q9HCM4 733 aa11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 EHD2Q9NZN4 543 aa11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 LCMT1Q9UIC8 334 aa11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 ALKQ9UM73 1620 aa11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 OAS2P29728 719 aaKnown RBP11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 NOP14P78316 857 aaKnown RBP11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 RCN2Q14257 317 aa11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 WDR72Q3MJ13 1102 aa11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 MB21D2Q8IYB1 491 aaPredicted RBP11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 RNF10Q8N5U6 811 aaKnown RBP11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 SH3BP1Q9Y3L3 701 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms