RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 MGAT5Q09328 741 aa4.88□□□□□ -1.63
PTPN22-201ENST00000359785 MAPK7Q13164 816 aa4.88□□□□□ -1.63
PTPN22-201ENST00000359785 AUHQ13825 339 aaKnown RBP4.88□□□□□ -1.63
PTPN22-201ENST00000359785 CWF19L2Q2TBE0 894 aaKnown RBP4.88□□□□□ -1.63
PTPN22-201ENST00000359785 ACCSLQ4AC99 568 aa4.88□□□□□ -1.63
PTPN22-201ENST00000359785 PPP1R21Q6ZMI0 780 aa4.88□□□□□ -1.63
PTPN22-201ENST00000359785 NET1Q7Z628 596 aaPredicted RBP4.88□□□□□ -1.63
PTPN22-201ENST00000359785 IFNL3Q8IZI9 196 aa4.88□□□□□ -1.63
PTPN22-201ENST00000359785 RIN2Q8WYP3 895 aaPredicted RBP4.88□□□□□ -1.63
PTPN22-201ENST00000359785 STAMBPL1Q96FJ0 436 aa4.88□□□□□ -1.63
PTPN22-201ENST00000359785 RMDN2Q96LZ7 410 aa4.88□□□□□ -1.63
PTPN22-201ENST00000359785 SPATA16Q9BXB7 569 aa4.88□□□□□ -1.63
PTPN22-201ENST00000359785 DHX36Q9H2U1 1008 aaKnown RBP4.88□□□□□ -1.63
PTPN22-201ENST00000359785 ST6GALNAC4Q9H4F1 302 aa4.88□□□□□ -1.63
PTPN22-201ENST00000359785 MAGEE1Q9HCI5 957 aa4.88□□□□□ -1.63
PTPN22-201ENST00000359785 PNPLA8Q9NP80 782 aa4.88□□□□□ -1.63
PTPN22-201ENST00000359785 HDAC6Q9UBN7 1215 aa4.88□□□□□ -1.63
PTPN22-201ENST00000359785 SUN2Q9UH99 717 aa4.88□□□□□ -1.63
PTPN22-201ENST00000359785 SMG5Q9UPR3 1016 aaKnown RBP4.88□□□□□ -1.63
PTPN22-201ENST00000359785 KIAA1024Q9UPX6 916 aa4.88□□□□□ -1.63
PTPN22-201ENST00000359785 EME2A4GXA9 379 aaPredicted RBP4.87□□□□□ -1.63
PTPN22-201ENST00000359785 PALM3A6NDB9 673 aaPredicted RBP4.87□□□□□ -1.63
PTPN22-201ENST00000359785 KBTBD13C9JR72 458 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 TBX3O15119 743 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 RIPK2O43353 540 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 CLASP2O75122 1294 aaKnown RBP4.87□□□□□ -1.63
PTPN22-201ENST00000359785 SUN1O94901 812 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 HARSP12081 509 aaKnown RBP4.87□□□□□ -1.63
PTPN22-201ENST00000359785 PDE6AP16499 860 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 CTNNA1P35221 906 aaKnown RBP4.87□□□□□ -1.63
PTPN22-201ENST00000359785 PMS1P54277 932 aaKnown RBP4.87□□□□□ -1.63
PTPN22-201ENST00000359785 AMPD3Q01432 767 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 UBXN1Q04323 297 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 KLC1Q07866 573 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 VPS72Q15906 364 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 TAZQ16635 292 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 PDK4Q16654 411 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 SH2D5Q6ZV89 423 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 CYS1Q717R9 158 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 ERICH1Q86X53 443 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 MIGA1Q8NAN2 632 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 NEK9Q8TD19 979 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 CCDC114Q96M63 670 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 TTC25Q96NG3 672 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 TRIM7Q9C029 511 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 EHD4Q9H223 541 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 NRDE2Q9H7Z3 1164 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 TUBA8Q9NY65 449 aaPredicted RBP4.87□□□□□ -1.63
PTPN22-201ENST00000359785 KCND2Q9NZV8 630 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 KDM3AQ9Y4C1 1321 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 ANKRD36A6QL64 1941 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 ZNF106Q9H2Y7 1883 aaKnown RBP4.87□□□□□ -1.63
PTPN22-201ENST00000359785 CAPN14A8MX76 684 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 E7ESA3 106 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 LSM1O15116 133 aaKnown RBP4.87□□□□□ -1.63
PTPN22-201ENST00000359785 TJP3O95049 919 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 ZWINTO95229 277 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 ZBED1O96006 694 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 ACAT1P24752 427 aaKnown RBP4.87□□□□□ -1.63
PTPN22-201ENST00000359785 IFNAR2P48551 515 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 RASSF2P50749 326 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 EMP3P54852 163 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 CENPCQ03188 943 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 ADCY1Q08828 1119 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 SPA17Q15506 151 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 CNBD1Q8NA66 436 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 PIGOQ8TEQ8 1089 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 MAML1Q92585 1016 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 DNAJC19Q96DA6 116 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 SORT1Q99523 831 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 MPHOSPH6Q99547 160 aaKnown RBP4.87□□□□□ -1.63
PTPN22-201ENST00000359785 EPAS1Q99814 870 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 GPR88Q9GZN0 384 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 PCDH18Q9HCL0 1135 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 LMCD1Q9NZU5 365 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 ZSWIM5Q9P217 1185 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 LRWD1Q9UFC0 647 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 ZMYND8Q9ULU4 1186 aaPredicted RBP4.87□□□□□ -1.63
PTPN22-201ENST00000359785 WDR90Q96KV7 1748 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 A0A087WZG4 1122 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 IGKV6D-41A0A0C4DH26 115 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 GPR25O00155 361 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 MATN2O00339 956 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 KRT14P02533 472 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 C7P10643 843 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 PTPN4P29074 926 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 CCNFP41002 786 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 MAGEA6P43360 314 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 HK2P52789 917 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 CNTN2Q02246 1040 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 TCIRG1Q13488 830 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 GNL2Q13823 731 aaKnown RBP4.87□□□□□ -1.63
PTPN22-201ENST00000359785 EZH2Q15910 746 aaKnown RBP4.87□□□□□ -1.63
PTPN22-201ENST00000359785 DDB1Q16531 1140 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 SLC9C1Q4G0N8 1177 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 MSL1Q68DK7 614 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 RALYLQ86SE5 291 aaKnown RBP4.87□□□□□ -1.63
PTPN22-201ENST00000359785 LMNTD2Q8IXW0 634 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 BBOF1Q8ND07 529 aa4.87□□□□□ -1.63
PTPN22-201ENST00000359785 SLC7A14Q8TBB6 771 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms